Clone Name | rbastl56d06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HISZ_AQUAE (O67223) ATP phosphoribosyltransferase regulatory sub... | 31 | 0.66 | 2 | MYO2B_SACCA (Q875X4) Myosin-2B (Class V unconventional myosin MY... | 30 | 1.9 | 3 | HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor (Histid... | 27 | 9.5 |
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>HISZ_AQUAE (O67223) ATP phosphoribosyltransferase regulatory subunit| Length = 383 Score = 31.2 bits (69), Expect = 0.66 Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = -2 Query: 278 ALVLSSRYQRQKWGLSSDSTSTAWAPIQSRKLIVNSCHWAEARSCNHVFTYGKLFTLDVL 99 A+ Y ++ +GL D T+ +++ H + V+ +GK+F+LD Sbjct: 61 AITFKDSYTKESFGLRLDFTT---------QVVRTISHLRNVKLPERVYYFGKVFSLDRR 111 Query: 98 GFKNLE--VEFLASRNMI 51 GF+ L+ VE + ++++ Sbjct: 112 GFEKLQTGVELIGEKSIL 129
>MYO2B_SACCA (Q875X4) Myosin-2B (Class V unconventional myosin MYO2B) (Type V| myosin heavy chain MYO2B) (Myosin V MYO2B) Length = 1419 Score = 29.6 bits (65), Expect = 1.9 Identities = 17/62 (27%), Positives = 27/62 (43%) Frame = +1 Query: 7 KRSIDLFISHRVIQIIIFLEARNSTSRFLNPNTSNVKSFPYVKT*LHDLASAQ*HEFTIS 186 K+ +D SH++ +L N + L SN+ F V +DL+S Q H Sbjct: 1274 KKVLDWCNSHKIRNSTEYLRNVNQACKLLQLRISNISDFQLVCEFCYDLSSLQMHALLTK 1333 Query: 187 FR 192 +R Sbjct: 1334 YR 1335
>HRG_HUMAN (P04196) Histidine-rich glycoprotein precursor| (Histidine-proline-rich glycoprotein) (HPRG) Length = 525 Score = 27.3 bits (59), Expect = 9.5 Identities = 14/48 (29%), Positives = 23/48 (47%) Frame = -3 Query: 328 SCRPKGYDQGRVKPECQPSYCHLDIRDKSGDYHQILLVLPGHLSRAES 185 SC D V+PE + + ++ R + G Q+L + HL R E+ Sbjct: 16 SCAVSPTDCSAVEPEAEKALDLINKRRRDGYLFQLLRIADAHLDRVEN 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,479,710 Number of Sequences: 219361 Number of extensions: 867109 Number of successful extensions: 1670 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1645 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1670 length of database: 80,573,946 effective HSP length: 91 effective length of database: 60,612,095 effective search space used: 1454690280 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)