Clone Name | rbastl56d06 |
---|---|
Clone Library Name | barley_pub |
>gb|U41273.1| Caenorhabditis elegans cosmid C26B9, complete sequence Length = 24378 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 130 gtgaaaacatgattacatgat 150 ||||||||||||||||||||| Sbjct: 14645 gtgaaaacatgattacatgat 14625
>emb|CR293520.5| Zebrafish DNA sequence from clone CH211-150J10 in linkage group 7, complete sequence Length = 168537 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 128 atgtgaaaacatgattacat 147 |||||||||||||||||||| Sbjct: 137330 atgtgaaaacatgattacat 137311
>emb|AL161574.2|ATCHRIV70 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 70 Length = 198429 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 caagattcttaaaccctaat 102 |||||||||||||||||||| Sbjct: 40951 caagattcttaaaccctaat 40932
>emb|AL078469.2|ATF25O24 Arabidopsis thaliana DNA chromosome 4, BAC clone F25O24 (ESSA project) Length = 97714 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 caagattcttaaaccctaat 102 |||||||||||||||||||| Sbjct: 65982 caagattcttaaaccctaat 65963
>emb|AL078470.1|ATF19B15 Arabidopsis thaliana DNA chromosome 4, BAC clone F19B15 (ESSA project) Length = 101679 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 83 caagattcttaaaccctaat 102 |||||||||||||||||||| Sbjct: 24478 caagattcttaaaccctaat 24459
>emb|BX088685.8| Zebrafish DNA sequence from clone CH211-206G7, complete sequence Length = 169155 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 cttgcttctgcccagtgaca 170 |||||||||||||||||||| Sbjct: 37042 cttgcttctgcccagtgaca 37061
>gb|AC122718.2| Homo sapiens chromosome 5 clone RP11-631M6, complete sequence Length = 170043 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tttccatatgtgaaaacatg 140 |||||||||||||||||||| Sbjct: 77718 tttccatatgtgaaaacatg 77699
>emb|AL808147.21| Mouse DNA sequence from clone RP23-80N9 on chromosome 4, complete sequence Length = 233270 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 tactagtagaatctgatgat 234 |||||||||||||||||||| Sbjct: 207034 tactagtagaatctgatgat 207053
>emb|CT030257.7| Mouse DNA sequence from clone RP24-374H2 on chromosome 13, complete sequence Length = 184172 Score = 40.1 bits (20), Expect = 4.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 ggcattctggcttaaccctt 299 |||||||||||||||||||| Sbjct: 169708 ggcattctggcttaaccctt 169727 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,929,348 Number of Sequences: 3902068 Number of extensions: 2929348 Number of successful extensions: 54439 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 54423 Number of HSP's gapped (non-prelim): 16 length of query: 348 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 326 effective length of database: 17,147,199,772 effective search space: 5589987125672 effective search space used: 5589987125672 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)