>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence
          Length = 1590432

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 4       ataagaatatactcatagcat 24
               |||||||||||||||||||||
Sbjct: 1363415 ataagaatatactcatagcat 1363395

>gb|AC079815.9| Trypanosoma brucei chromosome 4 clone RPCI93-3M17, complete sequence
          Length = 144365

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 4     ataagaatatactcatagcat 24
             |||||||||||||||||||||
Sbjct: 41302 ataagaatatactcatagcat 41282

>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete
              sequence
          Length = 3214944

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 247    atgcaagctgctcctggctttaaaa 271
              ||||||||||| |||||||||||||
Sbjct: 569081 atgcaagctgcgcctggctttaaaa 569057

>gb|AC008534.7| Homo sapiens chromosome 5 clone CTC-484P3, complete sequence
          Length = 253402

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 14     actcatagcatcaatttttctatta 38
              ||||||||||||| |||||||||||
Sbjct: 166776 actcatagcatcattttttctatta 166800

>gb|AC102166.13| Mus musculus chromosome 1, clone RP23-447B15, complete sequence
          Length = 182043

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 72     caaatttgtatgctgtgaaaacctaaaa 99
              |||||||||||||| ||||||| |||||
Sbjct: 120500 caaatttgtatgctatgaaaacttaaaa 120473

>gb|AC147092.3| Pan troglodytes BAC clone RP43-55E11 from 7, complete sequence
          Length = 153171

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 24     tcaatttttctattaaattg 43
              ||||||||||||||||||||
Sbjct: 117090 tcaatttttctattaaattg 117071

>gb|AC148003.2| Mus musculus BAC clone RP23-413H13 from chromosome 18, complete sequence
          Length = 205418

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 25     caatttttctattaaattgccagc 48
              |||||||||||||| |||||||||
Sbjct: 122412 caatttttctattagattgccagc 122435

>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 59      gaaattctcggttcaaattt 78
               ||||||||||||||||||||
Sbjct: 5305717 gaaattctcggttcaaattt 5305698

>gb|AY371697.2| Homo sapiens integrin, alpha 8 (ITGA8) gene, complete cds
          Length = 206310

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 27   atttttctattaaattgccagcttgttctagt 58
            |||||||| || |||||||| |||||||||||
Sbjct: 5168 atttttctgtttaattgccaacttgttctagt 5137

>emb|BX649247.9| Zebrafish DNA sequence from clone DKEY-181C10 in linkage group 15,
              complete sequence
          Length = 194916

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     catcaatttttctattaaat 41
              ||||||||||||||||||||
Sbjct: 116975 catcaatttttctattaaat 116956

>gb|AC129598.4| Mus musculus BAC clone RP23-283O5 from chromosome 18, complete
            sequence
          Length = 213381

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 25   caatttttctattaaattgccagc 48
            |||||||||||||| |||||||||
Sbjct: 4906 caatttttctattagattgccagc 4929

>gb|AC110823.5| Mus musculus BAC clone RP24-366C12 from chromosome 7, complete sequence
          Length = 141116

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     atatactcatagcatcaatt 29
              ||||||||||||||||||||
Sbjct: 103303 atatactcatagcatcaatt 103322

>gb|AC117194.3| Mus musculus BAC clone RP23-92K11 from 12, complete sequence
          Length = 204913

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    cattttgcttcttctctggc 331
              ||||||||||||||||||||
Sbjct: 173385 cattttgcttcttctctggc 173404

>gb|AC006355.3| Homo sapiens PAC clone RP5-1093G23 from 7, complete sequence
          Length = 137611

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    tcaatttttctattaaattg 43
             ||||||||||||||||||||
Sbjct: 92884 tcaatttttctattaaattg 92865

>emb|AL359645.16| Human DNA sequence from clone RP11-39J5 on chromosome 10 Contains the 5'
              end of the ITGA8 gene for integrin alpha 8 and CpG island,
              complete sequence
          Length = 149200

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 27     atttttctattaaattgccagcttgttctagt 58
              |||||||| || |||||||| |||||||||||
Sbjct: 119688 atttttctgtttaattgccaacttgttctagt 119719

>emb|AL356773.12| Human DNA sequence from clone RP11-44E24 on chromosome 1 Contains part
             of the RYR2 gene for ryanodine receptor 2 (cardiac),
             complete sequence
          Length = 108625

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 202   ctgaaagccaaaacaggttt 221
             ||||||||||||||||||||
Sbjct: 64258 ctgaaagccaaaacaggttt 64239

>gb|AE008835.1| Salmonella typhimurium LT2, section 139 of 220 of the complete genome
          Length = 21791

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    tcataagaatatactcatag 21
            ||||||||||||||||||||
Sbjct: 6468 tcataagaatatactcatag 6487

>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the
             3' end of the Acac gene for acetyl-Coenzyme A carboxylase,
             complete sequence
          Length = 187803

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   tgcaagctgctcctggcttt 267
             ||||||||||||||||||||
Sbjct: 41975 tgcaagctgctcctggcttt 41956

>gb|AC022532.13| Homo sapiens chromosome 10 clone RP11-104F15, complete sequence
          Length = 208823

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 313    attttgcttcttctctggcc 332
              ||||||||||||||||||||
Sbjct: 155822 attttgcttcttctctggcc 155803

>gb|AC016763.8| Homo sapiens BAC clone RP11-548K3 from 2, complete sequence
          Length = 143283

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    atcaatttttctattaaatt 42
             ||||||||||||||||||||
Sbjct: 60028 atcaatttttctattaaatt 60009

>gb|AC121253.3| Homo sapiens chromosome 3 clone RP11-208G16, complete sequence
          Length = 142193

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    catcaatttttctattaaat 41
             ||||||||||||||||||||
Sbjct: 30604 catcaatttttctattaaat 30623

>emb|BX247886.7| Zebrafish DNA sequence from clone DKEY-253J12 in linkage group 24,
              complete sequence
          Length = 149992

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     tgtgaaaacctaaaacatgt 104
              ||||||||||||||||||||
Sbjct: 149253 tgtgaaaacctaaaacatgt 149272

>gb|AC142112.3| Mus musculus BAC clone RP24-87H1 from 12, complete sequence
          Length = 229085

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 312    cattttgcttcttctctggc 331
              ||||||||||||||||||||
Sbjct: 114692 cattttgcttcttctctggc 114673

>gb|AC150312.2| Mus musculus BAC clone RP23-336M16 from 7, complete sequence
          Length = 207429

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     atatactcatagcatcaatt 29
              ||||||||||||||||||||
Sbjct: 136193 atatactcatagcatcaatt 136174

>dbj|BA000021.3| Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis DNA,
              complete genome
          Length = 697724

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     atcaatttttctattaaatt 42
              ||||||||||||||||||||
Sbjct: 549112 atcaatttttctattaaatt 549131

>dbj|AP005270.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-291B19, complete
              sequence
          Length = 200493

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    agctcttgccgctgccatcc 300
              ||||||||||||||||||||
Sbjct: 140700 agctcttgccgctgccatcc 140681

>gb|AC158950.3| Mus musculus chromosome 1, clone RP24-215K13, complete sequence
          Length = 208060

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 72    caaatttgtatgctgtgaaaacctaaaa 99
             |||||||||||||| ||||||| |||||
Sbjct: 33135 caaatttgtatgctatgaaaacttaaaa 33162


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,208,269
Number of Sequences: 3902068
Number of extensions: 4208269
Number of successful extensions: 82085
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82000
Number of HSP's gapped (non-prelim): 85
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)