Clone Name | rbastl56d03 |
---|---|
Clone Library Name | barley_pub |
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 37.0 bits (84), Expect = 0.012 Identities = 14/21 (66%), Positives = 20/21 (95%) Frame = -1 Query: 374 IVIGFIGMPIAAIVKLIPVGS 312 I++GF+GMP+AA +K+IPVGS Sbjct: 999 IILGFLGMPVAAALKMIPVGS 1019
>SCRB_KLEPN (P27217) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 465 Score = 30.8 bits (68), Expect = 0.84 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +3 Query: 219 TTAPELHWRHQPLVLLPD 272 ++A LHWRH+P+ L+PD Sbjct: 73 SSADLLHWRHEPIALMPD 90
>ACA2_ARATH (O81108) Calcium-transporting ATPase 2, plasma membrane-type (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 2) Length = 1014 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/19 (73%), Positives = 16/19 (84%) Frame = -1 Query: 374 IVIGFIGMPIAAIVKLIPV 318 I IGF+GMPIAA +K IPV Sbjct: 996 IFIGFLGMPIAAGLKTIPV 1014
>ACA7_ARATH (O64806) Putative calcium-transporting ATPase 7, plasma membrane-type| (EC 3.6.3.8) (Ca(2+)-ATPase isoform 7) Length = 1015 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/19 (68%), Positives = 16/19 (84%) Frame = -1 Query: 374 IVIGFIGMPIAAIVKLIPV 318 I +GF+GMPIAA +K IPV Sbjct: 997 IFVGFLGMPIAAGLKKIPV 1015
>SCRB_SALTY (P37075) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 466 Score = 28.5 bits (62), Expect = 4.1 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +3 Query: 234 LHWRHQPLVLLPD 272 LHW+H+P+ L+PD Sbjct: 79 LHWQHEPIALMPD 91
>ZN493_HUMAN (Q6ZR52) Zinc finger protein 493| Length = 646 Score = 28.5 bits (62), Expect = 4.1 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Frame = +1 Query: 13 QAYHTISSF--NTPRKIT*KKKLQGVYQTLLKNQAHSLGSSSKDQMQKKKEGHRFT*I-- 180 + Y+ ++ + T KI K V+ LL + H+ + K + KK G F + Sbjct: 9 EGYNELNQYLTTTQSKIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCGKSFCMLLH 68 Query: 181 ----KRINSRKNSFLCSQ 222 KRI+ R+NS+ C + Sbjct: 69 LCQHKRIHIRENSYRCEE 86
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 28.1 bits (61), Expect = 5.4 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = -3 Query: 120 KTVGLILQKCLIDPL*FLF--SCYFPWSVET*NCMISLQP 7 K G +L++ L P +F SC PW+V C + QP Sbjct: 19 KLCGQVLEEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQP 58
>SL9A3_HUMAN (P48764) Sodium/hydrogen exchanger 3 (Na(+)/H(+) exchanger 3)| (NHE-3) (Solute carrier family 9 member 3) Length = 834 Score = 27.7 bits (60), Expect = 7.1 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -3 Query: 201 LSAINPFYLGESMAFFFLLHLIFRGRAKTVGLILQKCLID 82 +SA+NPF + AF LL L+F + +G++LQ L++ Sbjct: 356 ISAVNPFIWTWNTAFV-LLTLVFISVYRAIGVVLQTWLLN 394
>DNSL1_HUMAN (P49184) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (Muscle-specific DNase I-like) (DNase X) (XIB) Length = 302 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 237 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 347 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>DNSL1_CERAE (Q2QDF1) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (DNase X) Length = 302 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +3 Query: 237 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 347 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>YL92_SCHPO (Q9HFF2) Hypothetical protein C683.02c in chromosome I| Length = 218 Score = 27.3 bits (59), Expect = 9.2 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +1 Query: 103 NQAHSLGSSSKDQMQKKKEGHRFT*IKRINSRKNS---FLCSQQ 225 N S GSS + ++KK+ + ++RIN R F C QQ Sbjct: 42 NMKASFGSSKRYDERQKKKRSEYRRLRRINQRNRDKFCFACRQQ 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,390,071 Number of Sequences: 219361 Number of extensions: 831325 Number of successful extensions: 1678 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1673 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1678 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)