ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ASCC2_HUMAN (Q9H1I8) Activating signal cointegrator 1 complex su... 33 0.16
2ASCC2_MOUSE (Q91WR3) Activating signal cointegrator 1 complex su... 30 1.7

>ASCC2_HUMAN (Q9H1I8) Activating signal cointegrator 1 complex subunit 2 (ASC-1|
           complex subunit p100) (Trip4 complex subunit p100)
          Length = 757

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 18/62 (29%), Positives = 28/62 (45%)
 Frame = +1

Query: 1   DTQRQSIHTYSGQQQQQSTVGASVPQGDGMGDDDDKTERVLES*HKTKATERRHTMVFRR 180
           + +R +     G +   ST  A  P+G G   +  +  R  E+   T+A   R TM  R+
Sbjct: 690 EARRMAFLAKKGYRHDSSTAVAGSPRGHGQSRETTQERRKKEANKATRANHNRRTMADRK 749

Query: 181 RS 186
           RS
Sbjct: 750 RS 751



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>ASCC2_MOUSE (Q91WR3) Activating signal cointegrator 1 complex subunit 2 (ASC-1|
           complex subunit p100) (Trip4 complex subunit p100)
          Length = 749

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 16/62 (25%), Positives = 27/62 (43%)
 Frame = +1

Query: 1   DTQRQSIHTYSGQQQQQSTVGASVPQGDGMGDDDDKTERVLES*HKTKATERRHTMVFRR 180
           + +R +     G + + ST     P+G G   +  +  R  E+    +A   R TM  R+
Sbjct: 682 EARRMAFLARKGYRPENSTAVTGGPRGHGQSRETTQERRKKEANKAARANHNRRTMADRK 741

Query: 181 RS 186
           RS
Sbjct: 742 RS 743


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,848,903
Number of Sequences: 219361
Number of extensions: 387503
Number of successful extensions: 1325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 80,573,946
effective HSP length: 43
effective length of database: 71,141,423
effective search space used: 1707394152
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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