ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56c11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, com... 44 0.16
2gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, com... 44 0.16
3emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, ... 44 0.16
4emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BA... 44 0.16
5dbj|BS000666.1| Pan troglodytes chromosome Y clone:PTBY-003G06, ... 44 0.16
6dbj|BS000578.1| Pan troglodytes chromosome Y clone:PTB-519P18, c... 44 0.16
7gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence 44 0.16
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
9dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.16
10gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome... 42 0.65
11ref|XM_322795.1| Neurospora crassa OR74A hypothetical protein ( ... 42 0.65
12ref|XM_951724.1| Neurospora crassa OR74A hypothetical protein ( ... 42 0.65
13gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosom... 42 0.65
14emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chrom... 42 0.65
15emb|AL604028.15| Human DNA sequence from clone RP11-767N6 on chr... 42 0.65
16emb|AL355140.25| Human DNA sequence from clone RP11-548B3 on chr... 42 0.65
17emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N... 42 0.65
18emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9,... 42 0.65
19emb|AL390092.1|NCB2A19 Neurospora crassa DNA linkage group II BA... 42 0.65
20gb|AC068112.5| Homo sapiens chromosome 18, clone RP11-526H11, co... 42 0.65
21emb|BX323799.14| Zebrafish DNA sequence from clone CH211-159B19 ... 42 0.65
22gb|AC016017.14| Mus Musculus Strain C57BL6/J Chromosome 6 BAC Cl... 42 0.65
23gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, co... 42 0.65
24gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome... 42 0.65
25gb|AC159930.3| Papio anubis clone RP41-174M1, complete sequence 42 0.65
26gb|AC159987.5| Mus musculus 10 BAC RP23-475N14 (Roswell Park Can... 42 0.65
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.65
28gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, comple... 42 0.65
29gb|AC074366.6| Homo sapiens BAC clone RP11-255N19 from 2, comple... 42 0.65
30emb|BX679673.6| Mouse DNA sequence from clone RP23-252K15 on chr... 42 0.65
31dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.65
32gb|AC151994.3| Mus musculus BAC clone RP23-188B20 from 14, compl... 42 0.65
33gb|AC079438.30| Mus musculus strain C57BL/6J chromosome 6 clone ... 42 0.65
34ref|NM_128662.2| Arabidopsis thaliana transcription factor AT2G3... 40 2.6
35gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, com... 40 2.6
36ref|XM_640239.1| Dictyostelium discoideum hypothetical protein (... 40 2.6
37ref|XM_636041.1| Dictyostelium discoideum hypothetical protein (... 40 2.6
38ref|XM_631277.1| Dictyostelium discoideum hypothetical protein (... 40 2.6
39ref|XM_631203.1| Dictyostelium discoideum hypothetical protein (... 40 2.6
40ref|XM_631134.1| Dictyostelium discoideum cell surface protein D... 40 2.6
41gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome... 40 2.6
42gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
43gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, co... 40 2.6
44ref|XM_425708.1| PREDICTED: Gallus gallus similar to opioid grow... 40 2.6
45gb|AE009252.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 2.6
46gb|AE008361.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 2.6
47gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete seq... 40 2.6
48gb|AC184157.2| Pan troglodytes BAC clone CH251-31B9 from chromos... 40 2.6
49gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromo... 40 2.6
50gb|AC102449.7| Mus musculus chromosome 5, clone RP24-216G12, com... 40 2.6
51gb|AC123824.4| Mus musculus BAC clone RP24-84D16 from chromosome... 40 2.6
52emb|CT010448.4| Mouse DNA sequence from clone RP23-290P4 on chro... 40 2.6
53gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosom... 40 2.6
54gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosom... 40 2.6
55ref|XM_813157.1| Trypanosoma cruzi strain CL Brener DNA polymera... 40 2.6
56gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome... 40 2.6
57gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Can... 40 2.6
58emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on ... 40 2.6
59emb|AL606495.6| Human DNA sequence from clone RP11-7G12 on chrom... 40 2.6
60emb|AL589663.19| Human DNA sequence from clone RP11-470H9 on chr... 40 2.6
61gb|AY117535.1| Dahlia merckii external transcribed spacer and 18... 40 2.6
62gb|AY117534.1| Dahlia tubulata external transcribed spacer and 1... 40 2.6
63emb|AL357499.10| Human DNA sequence from clone RP11-455L10 on ch... 40 2.6
64emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on ch... 40 2.6
65emb|AL354795.17| Human DNA sequence from clone RP11-174B4 on chr... 40 2.6
66emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chr... 40 2.6
67gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, c... 40 2.6
68emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040... 40 2.6
69emb|AL049792.11|HSJ305B16 Human DNA sequence from clone RP1-305B... 40 2.6
70emb|BX059335.1|CNS09HY3 Single read from an extremity of a full-... 40 2.6
71gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosom... 40 2.6
72gb|AC161482.6| Mus musculus chromosome 1, clone RP23-415K20, com... 40 2.6
73gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, co... 40 2.6
74emb|BX284635.4| Zebrafish DNA sequence from clone CH211-188I4, c... 40 2.6
75gb|AC016266.14| Homo sapiens chromosome 15, clone RP11-2C7, comp... 40 2.6
76gb|AC005311.3| Arabidopsis thaliana chromosome 2 clone T16B12 ma... 40 2.6
77gb|AC099564.2| Homo sapiens chromosome 1 clone RP11-359A17, comp... 40 2.6
78dbj|AB077110.1| Prunus persica mRNA, microsatellite marker M5a 40 2.6
79dbj|AK137416.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 2.6
80dbj|AK156187.1| Mus musculus activated spleen cDNA, RIKEN full-l... 40 2.6
81dbj|AK148851.1| Mus musculus 2 days neonate sympathetic ganglion... 40 2.6
82gb|AC020716.3| Homo sapiens BAC clone RP11-449G13 from 16, compl... 40 2.6
83gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, comp... 40 2.6
84gb|AC021802.6| Homo sapiens, clone RP11-28C3, complete sequence 40 2.6
85gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequ... 40 2.6
86gb|AC011346.5| Homo sapiens chromosome 5 clone CTC-295J13, compl... 40 2.6
87gb|AY059945.1| Arabidopsis thaliana Unknown protein (At2g31070; ... 40 2.6
88gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosom... 40 2.6
89gb|AC154028.7| Mus musculus 10 BAC RP23-246J13 (Roswell Park Can... 40 2.6
90emb|BX682554.3| Zebrafish DNA sequence from clone DKEY-285G17 in... 40 2.6
91gb|AC010528.8|AC010528 Homo sapiens chromosome 16 clone RP11-150... 40 2.6
92gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex B... 40 2.6
93dbj|AK007321.1| Mus musculus 10 day old male pancreas cDNA, RIKE... 40 2.6
94dbj|AK089161.1| Mus musculus 10 days neonate olfactory brain cDN... 40 2.6
95gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Canc... 40 2.6
96dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
97dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
98gb|AC157935.3| Mus musculus chromosome 5, clone RP24-228K8, comp... 40 2.6
99emb|BX819697.1|CNS0AAFY Arabidopsis thaliana Full-length cDNA Co... 40 2.6
100emb|BX819612.1|CNS0A9Y1 Arabidopsis thaliana Full-length cDNA Co... 40 2.6
101emb|BX819690.1|CNS0A9CS Arabidopsis thaliana Full-length cDNA Co... 40 2.6
102gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101... 40 2.6
103dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 2.6
104gb|BC094426.1| Mus musculus sine oculis-related homeobox 3 homol... 40 2.6
105gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Canc... 40 2.6
106gb|AC115604.2| Dictyostelium discoideum chromosome 2 map 4354771... 40 2.6
107gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, co... 40 2.6
108dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
109gb|AC009046.4|AC009046 Homo sapiens chromosome 16 clone RP11-200... 40 2.6
110emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on ch... 40 2.6
111emb|AL807744.7| Mouse DNA sequence from clone RP23-174C4 on chro... 40 2.6
112dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.6
113gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, comple... 40 2.6
114gb|AC154543.2| Mus musculus BAC clone RP23-228E21 from 12, compl... 40 2.6
115gb|AC119928.8| Mus musculus chromosome 1, clone RP24-259F2, comp... 40 2.6
116emb|BX936336.10| Zebrafish DNA sequence from clone CH211-287B5 i... 40 2.6
117emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 i... 40 2.6
118dbj|AP003079.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 2.6
119gb|AF102575.1|AF102575 Dictyostelium discoideum cell surface pro... 40 2.6
120gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
121emb|AL974313.6| Zebrafish DNA sequence from clone CH211-281M5, c... 40 2.6
122emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on ch... 40 2.6
123gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, comple... 40 2.6
124gb|AC002546.1|AC002546 Homo sapiens chromosome 17, clone 193h18,... 40 2.6
125gb|AC102277.8| Mus musculus chromosome 1, clone RP24-297D13, com... 40 2.6
126gb|BT001194.1| Arabidopsis thaliana Unknown protein (At2g31070) ... 40 2.6
127emb|AL672253.7| Mouse DNA sequence from clone RP23-13G19 on chro... 40 2.6

>gb|AC147343.2| Pan troglodytes BAC clone CH251-14P15 from Y, complete sequence
          Length = 277007

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 30     cagtggccaacaacaacaacaa 51
              ||||||||||||||||||||||
Sbjct: 140276 cagtggccaacaacaacaacaa 140297



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>gb|AC147117.2| Pan troglodytes BAC clone CH251-532B3 from Y, complete sequence
          Length = 207020

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 30    cagtggccaacaacaacaacaa 51
             ||||||||||||||||||||||
Sbjct: 40463 cagtggccaacaacaacaacaa 40442



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>emb|AL161552.2|ATCHRIV52 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 52
          Length = 198427

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 92    gtgatgatgatgataaaactga 113
             ||||||||||||||||||||||
Sbjct: 92336 gtgatgatgatgataaaactga 92315



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>emb|AL022224.1|ATF1C12 Arabidopsis thaliana DNA chromosome 4, BAC clone F1C12 (ESSA project)
          Length = 111945

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 92    gtgatgatgatgataaaactga 113
             ||||||||||||||||||||||
Sbjct: 24913 gtgatgatgatgataaaactga 24892



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>dbj|BS000666.1| Pan troglodytes chromosome Y clone:PTBY-003G06, complete sequences
          Length = 102559

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 30    cagtggccaacaacaacaacaa 51
             ||||||||||||||||||||||
Sbjct: 27617 cagtggccaacaacaacaacaa 27596



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>dbj|BS000578.1| Pan troglodytes chromosome Y clone:PTB-519P18, complete sequences
          Length = 175850

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 30    cagtggccaacaacaacaacaa 51
             ||||||||||||||||||||||
Sbjct: 13416 cagtggccaacaacaacaacaa 13437



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>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence
          Length = 23952694

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 30     cagtggccaacaacaacaacaa 51
              ||||||||||||||||||||||
Sbjct: 209295 cagtggccaacaacaacaacaa 209316



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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 31       agtggccaacaacaacaacaaa 52
                ||||||||||||||||||||||
Sbjct: 15544650 agtggccaacaacaacaacaaa 15544629



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>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0689B09
          Length = 144932

 Score = 44.1 bits (22), Expect = 0.16
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 31    agtggccaacaacaacaacaaa 52
             ||||||||||||||||||||||
Sbjct: 65505 agtggccaacaacaacaacaaa 65484



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>gb|AC117203.4| Mus musculus BAC clone RP23-251N4 from chromosome 10, complete sequence
          Length = 231532

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    caacaacaacaacaaagtact 57
             |||||||||||||||||||||
Sbjct: 84252 caacaacaacaacaaagtact 84232



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>ref|XM_322795.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
            B2A19.40 [imported] - Neurospora crassa OR74A )
            (NCU03538.1) partial mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   cagtggccaacaacaacaaca 50
            |||||||||||||||||||||
Sbjct: 1158 cagtggccaacaacaacaaca 1178



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>ref|XM_951724.1| Neurospora crassa OR74A hypothetical protein ( hypothetical protein
            B2A19.40 [imported] - Neurospora crassa OR74A )
            (NCU03538.1) partial mRNA
          Length = 1455

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 30   cagtggccaacaacaacaaca 50
            |||||||||||||||||||||
Sbjct: 1158 cagtggccaacaacaacaaca 1178



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>gb|AC129216.4| Mus musculus BAC clone RP24-446C11 from chromosome 14, complete
             sequence
          Length = 190338

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 37    caacaacaacaacaaagtact 57
             |||||||||||||||||||||
Sbjct: 78457 caacaacaacaacaaagtact 78437



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>emb|CR956382.7| Pig DNA sequence from clone CH242-231E9 on chromosome 6, complete
              sequence
          Length = 186091

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 32     gtggccaacaacaacaacaaa 52
              |||||||||||||||||||||
Sbjct: 121416 gtggccaacaacaacaacaaa 121396



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>emb|AL604028.15| Human DNA sequence from clone RP11-767N6 on chromosome 1 Contains the
             gene for a novel protein (SP192) (DKFZp434H1428,
             FLJ21319), a ribosomal protein S15a (RPS15A) pseudogene, a
             ribosomal protein L7a (RPL7A) pseudogene, the gene for a
             novel protein (FLJ21029) and one CpG island, complete
             sequence
          Length = 82964

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 37    caacaacaacaacaaagtact 57
             |||||||||||||||||||||
Sbjct: 51987 caacaacaacaacaaagtact 52007



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>emb|AL355140.25| Human DNA sequence from clone RP11-548B3 on chromosome 9 Contains the
             gene for Friedreich ataxia region gene X123, the 3' end of
             the APBA1 gene for myloid beta (A4) precursor
             protein-binding, family A, member 1 (X11), a novel gene
             and two CpG islands, complete sequence
          Length = 185096

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 32    gtggccaacaacaacaacaaa 52
             |||||||||||||||||||||
Sbjct: 30893 gtggccaacaacaacaacaaa 30913



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>emb|AL132825.35|HSDJ756N5 Human DNA sequence from clone RP4-756N5 on chromosome 20q11.21-12
              Contains the MYH7B gene for myosin heavy polypeptide 7B
              (cardiac muscle) beta, the C20orf188 gene for a novel
              protein similar to Trp4-associated protein TAP1 (ABCB2) and
              two CpG islands, complete sequence
          Length = 123782

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     caacaacaacaacaaagtact 57
              |||||||||||||||||||||
Sbjct: 102452 caacaacaacaacaaagtact 102472



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>emb|AL445624.3|HS512L9 Homo sapiens chromosome 9 BAC RP11-512L9, complete sequence
          Length = 179526

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     caacaacaacaacaaagtact 57
              |||||||||||||||||||||
Sbjct: 136560 caacaacaacaacaaagtact 136540



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>emb|AL390092.1|NCB2A19 Neurospora crassa DNA linkage group II BAC clone B2A19
          Length = 72788

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    cagtggccaacaacaacaaca 50
             |||||||||||||||||||||
Sbjct: 11984 cagtggccaacaacaacaaca 12004



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>gb|AC068112.5| Homo sapiens chromosome 18, clone RP11-526H11, complete sequence
          Length = 165840

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Minus

                                           
Query: 84     tggaatgggtgatgatg-atgataaaact 111
              ||||||||||||||||| |||||||||||
Sbjct: 139203 tggaatgggtgatgatgaatgataaaact 139175



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>emb|BX323799.14| Zebrafish DNA sequence from clone CH211-159B19 in linkage group 13,
              complete sequence
          Length = 188145

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 37     caacaacaacaacaaagtact 57
              |||||||||||||||||||||
Sbjct: 178069 caacaacaacaacaaagtact 178089



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>gb|AC016017.14| Mus Musculus Strain C57BL6/J Chromosome 6 BAC Clone RP23-274F23,
             complete sequence
          Length = 184892

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 35    gccaacaacaacaacaaagtactgt 59
             ||||||||||||||||||| |||||
Sbjct: 83856 gccaacaacaacaacaaagaactgt 83880



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>gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, complete sequence
          Length = 165879

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                           
Query: 84     tggaatgggtgatgatg-atgataaaact 111
              ||||||||||||||||| |||||||||||
Sbjct: 142087 tggaatgggtgatgatgaatgataaaact 142115



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>gb|AC161252.2| Mus musculus BAC clone RP24-167E3 from chromosome 13, complete sequence
          Length = 158432

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     tgatgatgatgataaaactga 113
              |||||||||||||||||||||
Sbjct: 101909 tgatgatgatgataaaactga 101929



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>gb|AC159930.3| Papio anubis clone RP41-174M1, complete sequence
          Length = 163985

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    gtggccaacaacaacaacaaa 52
             |||||||||||||||||||||
Sbjct: 23692 gtggccaacaacaacaacaaa 23672



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>gb|AC159987.5| Mus musculus 10 BAC RP23-475N14 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 172772

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     caacaacaacaacaaagtact 57
              |||||||||||||||||||||
Sbjct: 168576 caacaacaacaacaaagtact 168556



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 31       agtggccaacaacaacaacaa 51
                |||||||||||||||||||||
Sbjct: 16088781 agtggccaacaacaacaacaa 16088761



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>gb|AC009476.3| Homo sapiens BAC clone RP11-207O14 from 2, complete sequence
          Length = 184406

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    agtggccaacaacaacaacaa 51
             |||||||||||||||||||||
Sbjct: 30146 agtggccaacaacaacaacaa 30166



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>gb|AC074366.6| Homo sapiens BAC clone RP11-255N19 from 2, complete sequence
          Length = 111517

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 37    caacaacaacaacaaagtactgtag 61
             |||||||||||||||||||| ||||
Sbjct: 16141 caacaacaacaacaaagtacagtag 16117



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>emb|BX679673.6| Mouse DNA sequence from clone RP23-252K15 on chromosome X, complete
             sequence
          Length = 81270

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 27    atacagtggccaacaacaacaacaa 51
             ||||||| |||||||||||||||||
Sbjct: 40461 atacagtagccaacaacaacaacaa 40485



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>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0028A18
          Length = 151080

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    agtggccaacaacaacaacaa 51
             |||||||||||||||||||||
Sbjct: 26861 agtggccaacaacaacaacaa 26841



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>gb|AC151994.3| Mus musculus BAC clone RP23-188B20 from 14, complete sequence
          Length = 208952

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 37     caacaacaacaacaaagtact 57
              |||||||||||||||||||||
Sbjct: 198986 caacaacaacaacaaagtact 198966



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>gb|AC079438.30| Mus musculus strain C57BL/6J chromosome 6 clone rp23-176m22, complete
             sequence
          Length = 209643

 Score = 42.1 bits (21), Expect = 0.65
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    gccaacaacaacaacaaagtactgt 59
             ||||||||||||||||||| |||||
Sbjct: 69240 gccaacaacaacaacaaagaactgt 69216



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>ref|NM_128662.2| Arabidopsis thaliana transcription factor AT2G31070 mRNA, complete
            cds
          Length = 2017

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gtggccaacaacaacaacaa 51
            ||||||||||||||||||||
Sbjct: 1358 gtggccaacaacaacaacaa 1377



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>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 5124 caacaacaacaacaaagtac 5105



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>ref|XM_640239.1| Dictyostelium discoideum hypothetical protein (DDB0168640), partial
           mRNA
          Length = 1836

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  gtggccaacaacaacaacaa 51
           ||||||||||||||||||||
Sbjct: 119 gtggccaacaacaacaacaa 138



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>ref|XM_636041.1| Dictyostelium discoideum hypothetical protein (DDB0220644), partial
            mRNA
          Length = 7122

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 5044 caacaacaacaacaaagtac 5063



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>ref|XM_631277.1| Dictyostelium discoideum hypothetical protein (DDB0188268), partial
            mRNA
          Length = 5022

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 3184 caacaacaacaacaaagtac 3203



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>ref|XM_631203.1| Dictyostelium discoideum hypothetical protein (DDB0219424), partial
           mRNA
          Length = 2748

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  gtggccaacaacaacaacaa 51
           ||||||||||||||||||||
Sbjct: 602 gtggccaacaacaacaacaa 621



to top

>ref|XM_631134.1| Dictyostelium discoideum cell surface protein DTFA (DDB0191273),
            partial mRNA
          Length = 4209

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 1303 caacaacaacaacaaagtac 1322



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>gb|AC166821.2| Mus musculus BAC clone RP24-68F22 from chromosome 17, complete sequence
          Length = 202649

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ccaacaacaacaacaaagta 55
             ||||||||||||||||||||
Sbjct: 88199 ccaacaacaacaacaaagta 88218



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>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0073K23 map near R10571S, complete sequence
          Length = 161073

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 90    gggtgatgatgatgataaaactga 113
             |||||||||||||||||| |||||
Sbjct: 97192 gggtgatgatgatgataatactga 97169



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>gb|AC119252.10| Mus musculus chromosome 8, clone RP24-279M13, complete sequence
          Length = 176594

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 36777 caacaacaacaacaaagtac 36796



to top

>ref|XM_425708.1| PREDICTED: Gallus gallus similar to opioid growth factor receptor
           (LOC428150), mRNA
          Length = 2541

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  ccattcatacatacagtggc 36
           ||||||||||||||||||||
Sbjct: 942 ccattcatacatacagtggc 961



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>gb|AE009252.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 22 of
            187 of the complete sequence
          Length = 14499

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 87   aatgggtgatgatgatgata 106
            ||||||||||||||||||||
Sbjct: 4152 aatgggtgatgatgatgata 4133



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>gb|AE008361.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 165 of
             187 of the complete sequence
          Length = 12142

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 87    aatgggtgatgatgatgata 106
             ||||||||||||||||||||
Sbjct: 10434 aatgggtgatgatgatgata 10453



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>gb|AC147913.2| Xenopus tropicalis clone CH216-83K3, complete sequence
          Length = 176651

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    gccaacaacaacaacaaagt 54
             ||||||||||||||||||||
Sbjct: 86747 gccaacaacaacaacaaagt 86728



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>gb|AC184157.2| Pan troglodytes BAC clone CH251-31B9 from chromosome 15, complete
              sequence
          Length = 167965

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 144046 caacaacaacaacaaagtac 144027



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>gb|AC184054.2| Pan troglodytes BAC clone CH251-706J5 from chromosome 15, complete
            sequence
          Length = 177821

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 7433 caacaacaacaacaaagtac 7452



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>gb|AC102449.7| Mus musculus chromosome 5, clone RP24-216G12, complete sequence
          Length = 172155

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 30409 caacaacaacaacaaagtac 30390



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>gb|AC123824.4| Mus musculus BAC clone RP24-84D16 from chromosome 12, complete sequence
          Length = 205607

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 109066 caacaacaacaacaaagtac 109047



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>emb|CT010448.4| Mouse DNA sequence from clone RP23-290P4 on chromosome 17, complete
             sequence
          Length = 136671

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ccaacaacaacaacaaagta 55
             ||||||||||||||||||||
Sbjct: 19509 ccaacaacaacaacaaagta 19490



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>gb|AC133654.4| Mus musculus BAC clone RP24-332N10 from chromosome 15, complete
             sequence
          Length = 194622

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   tgataaaactgaaagggttcttga 125
             |||| |||||||||||||||||||
Sbjct: 31602 tgatgaaactgaaagggttcttga 31625



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>gb|AC122015.3| Mus musculus BAC clone RP24-358M18 from chromosome 6, complete sequence
          Length = 166966

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 163394 caacaacaacaacaaagtac 163375



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>ref|XM_813157.1| Trypanosoma cruzi strain CL Brener DNA polymerase theta (polymerase
            domain only) (Tc00.1047053508647.170) partial mRNA
          Length = 2646

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 91   ggtgatgatgatgataaaac 110
            ||||||||||||||||||||
Sbjct: 1058 ggtgatgatgatgataaaac 1039



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>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence
          Length = 193474

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 141791 caacaacaacaacaaagtac 141772



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>gb|AC159149.10| Mus musculus 10 BAC RP23-56F17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 219585

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     atgggtgatgatgatgataa 107
              ||||||||||||||||||||
Sbjct: 149667 atgggtgatgatgatgataa 149648



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>emb|Z77249.2|HS358H7 Human DNA sequence from clone RP3-358H7 on chromosome X Contains a
              DEAD-box protein pseudogene and the gene for a novel
              E2F-like protein (LOC51270), complete sequence
          Length = 148864

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     aacaacaacaaagtactgta 60
              ||||||||||||||||||||
Sbjct: 122008 aacaacaacaaagtactgta 122027



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>emb|AL606495.6| Human DNA sequence from clone RP11-7G12 on chromosome 1 Contains a
            ribosomal protein S3A (RPS3A) pseudogene, complete
            sequence
          Length = 120964

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 35   gccaacaacaacaacaaagt 54
            ||||||||||||||||||||
Sbjct: 9211 gccaacaacaacaacaaagt 9192



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>emb|AL589663.19| Human DNA sequence from clone RP11-470H9 on chromosome 1 Contains the
             5' end of the NRD1 gene for nardilysin (N-arginine dibasic
             convertase), a C1orf19 pseudogene and the 3' end of the
             RAB3B gene for RAB3B member RAS oncogene family, complete
             sequence
          Length = 104941

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 36    ccaacaacaacaacaaagta 55
             ||||||||||||||||||||
Sbjct: 53761 ccaacaacaacaacaaagta 53742



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>gb|AY117535.1| Dahlia merckii external transcribed spacer and 18S ribosomal RNA
           gene, partial sequence
          Length = 478

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 tgacacaagacaaaagcgac 149
           ||||||||||||||||||||
Sbjct: 309 tgacacaagacaaaagcgac 328



to top

>gb|AY117534.1| Dahlia tubulata external transcribed spacer and 18S ribosomal RNA
           gene, partial sequence
          Length = 478

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 tgacacaagacaaaagcgac 149
           ||||||||||||||||||||
Sbjct: 309 tgacacaagacaaaagcgac 328



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>emb|AL357499.10| Human DNA sequence from clone RP11-455L10 on chromosome 1 Contains part
              of the CHRM3 gene for muscarinic 3 cholinergic receptor,
              complete sequence
          Length = 150651

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 143838 caacaacaacaacaaagtac 143819



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>emb|AL356740.19| Human DNA sequence from clone RP11-120K24 on chromosome 13 Contains the
             3' end of the ATP11A gene for ATPase Class VI type 11A,
             the 5' end of the MCF2L gene for a MCF.2 cell line derived
             transforming sequence-like gene, a novel gene and eight
             CpG islands, complete sequence
          Length = 170928

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 49925 caacaacaacaacaaagtac 49906



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>emb|AL354795.17| Human DNA sequence from clone RP11-174B4 on chromosome 9q21.2-22.1
             Contains the TRPM6 gene for transient receptor potential
             cation channel, subfamily  M, member 6 (CHAK2, FLJ20087,
             FLJ22628) and 2 CpG islands, complete sequence
          Length = 195290

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tggccaacaacaacaacaaa 52
             ||||||||||||||||||||
Sbjct: 79860 tggccaacaacaacaacaaa 79841



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>emb|AL158831.15| Human DNA sequence from clone RP11-564A4 on chromosome 9, complete
              sequence
          Length = 162700

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 40     caacaacaacaaagtactgt 59
              ||||||||||||||||||||
Sbjct: 118681 caacaacaacaaagtactgt 118662



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>gb|AC015920.14| Homo sapiens chromosome 17, clone CTD-3022L24, complete sequence
          Length = 150453

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 36     ccaacaacaacaacaaagtactgt 59
              ||||||||||||||||| ||||||
Sbjct: 145870 ccaacaacaacaacaaaatactgt 145847



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>emb|AL121887.24|HS1040G13 Human DNA sequence from clone RP5-1040G13 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 113473

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tggccaacaacaacaacaaa 52
             ||||||||||||||||||||
Sbjct: 97512 tggccaacaacaacaacaaa 97493



to top

>emb|AL049792.11|HSJ305B16 Human DNA sequence from clone RP1-305B16 on chromosome Xq25-26.2
             Contains a novel gene, a novel pseudogene and the 3' end
             of the RAP2C gene for RAP2C (member of RAS oncogene
             family), complete sequence
          Length = 109524

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 41353 caacaacaacaacaaagtac 41334



to top

>emb|BX059335.1|CNS09HY3 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4AE09 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 841

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  gtggccaacaacaacaacaa 51
           ||||||||||||||||||||
Sbjct: 89  gtggccaacaacaacaacaa 108



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>gb|AC164097.2| Mus musculus BAC clone RP23-141F18 from chromosome 16, complete
            sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 2811 caacaacaacaacaaagtac 2792



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>gb|AC161482.6| Mus musculus chromosome 1, clone RP23-415K20, complete sequence
          Length = 190103

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 29843 caacaacaacaacaaagtac 29862



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>gb|AC087482.9| Homo sapiens chromosome 15, clone RP11-540N15, complete sequence
          Length = 194546

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 126680 caacaacaacaacaaagtac 126699



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>emb|BX284635.4| Zebrafish DNA sequence from clone CH211-188I4, complete sequence
          Length = 83373

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    tggccaacaacaacaacaaa 52
             ||||||||||||||||||||
Sbjct: 73415 tggccaacaacaacaacaaa 73434



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>gb|AC016266.14| Homo sapiens chromosome 15, clone RP11-2C7, complete sequence
          Length = 149387

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     tggccaacaacaacaacaaa 52
              ||||||||||||||||||||
Sbjct: 112739 tggccaacaacaacaacaaa 112720



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>gb|AC005311.3| Arabidopsis thaliana chromosome 2 clone T16B12 map m283, complete
             sequence
          Length = 82594

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gtggccaacaacaacaacaa 51
             ||||||||||||||||||||
Sbjct: 67942 gtggccaacaacaacaacaa 67961



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>gb|AC099564.2| Homo sapiens chromosome 1 clone RP11-359A17, complete sequence
          Length = 189509

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 139239 caacaacaacaacaaagtac 139258



to top

>dbj|AB077110.1| Prunus persica mRNA, microsatellite marker M5a
          Length = 385

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  gtggccaacaacaacaacaa 51
           ||||||||||||||||||||
Sbjct: 164 gtggccaacaacaacaacaa 183



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>dbj|AK137416.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630050M23
            product:unclassifiable, full insert sequence
          Length = 2299

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 1794 caacaacaacaacaaagtac 1775



to top

>dbj|AK156187.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched
            library, clone:F830011C06 product:unclassifiable, full
            insert sequence
          Length = 3063

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 2552 caacaacaacaacaaagtac 2533



to top

>dbj|AK148851.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN
            full-length enriched library, clone:7120454P04
            product:unclassifiable, full insert sequence
          Length = 2492

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 1981 caacaacaacaacaaagtac 1962



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>gb|AC020716.3| Homo sapiens BAC clone RP11-449G13 from 16, complete sequence
          Length = 171805

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 169110 caacaacaacaacaaagtac 169129



to top

>gb|AC091948.3| Homo sapiens chromosome 5 clone RP11-373N22, complete sequence
          Length = 172162

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    tacagtggccaacaacaacaacaa 51
             |||||| |||||||||||||||||
Sbjct: 46399 tacagttgccaacaacaacaacaa 46422



to top

>gb|AC021802.6| Homo sapiens, clone RP11-28C3, complete sequence
          Length = 140334

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 32176 caacaacaacaacaaagtac 32157



to top

>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence
          Length = 183894

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 73451 caacaacaacaacaaagtac 73470



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>gb|AC011346.5| Homo sapiens chromosome 5 clone CTC-295J13, complete sequence
          Length = 110077

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 28     tacagtggccaacaacaacaacaa 51
              |||||| |||||||||||||||||
Sbjct: 107428 tacagttgccaacaacaacaacaa 107451



to top

>gb|AY059945.1| Arabidopsis thaliana Unknown protein (At2g31070; T16B12.12) mRNA,
            complete cds
          Length = 1778

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gtggccaacaacaacaacaa 51
            ||||||||||||||||||||
Sbjct: 1358 gtggccaacaacaacaacaa 1377



to top

>gb|AC182231.2| Mus musculus BAC clone RP23-356C18 from chromosome 8, complete sequence
          Length = 206310

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 37376 caacaacaacaacaaagtac 37357



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>gb|AC154028.7| Mus musculus 10 BAC RP23-246J13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 206191

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 129399 caacaacaacaacaaagtac 129380



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>emb|BX682554.3| Zebrafish DNA sequence from clone DKEY-285G17 in linkage group 3,
             complete sequence
          Length = 61290

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    acaacaacaacaaagtactg 58
             ||||||||||||||||||||
Sbjct: 49554 acaacaacaacaaagtactg 49573



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>gb|AC010528.8|AC010528 Homo sapiens chromosome 16 clone RP11-150D5, complete sequence
          Length = 168172

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   gaaagggttcttgaatcttg 131
             ||||||||||||||||||||
Sbjct: 75773 gaaagggttcttgaatcttg 75754



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>gb|AC148691.1| Macaca mulatta Major Histocompatibility Complex BAC MMU234G08, complete
             sequence
          Length = 200068

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 37    caacaacaacaacaaagtactgta 60
             ||||||||||||||||||| ||||
Sbjct: 53766 caacaacaacaacaaagtattgta 53789



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>dbj|AK007321.1| Mus musculus 10 day old male pancreas cDNA, RIKEN full-length
          enriched library, clone:1810003C24 product:secreted and
          transmembrane 1, full insert sequence
          Length = 1076

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 25 acatacagtggccaacaacaacaacaaa 52
          |||| ||||| |||||||||||||||||
Sbjct: 16 acatgcagtgtccaacaacaacaacaaa 43



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>dbj|AK089161.1| Mus musculus 10 days neonate olfactory brain cDNA, RIKEN
           full-length enriched library, clone:E530020K13
           product:unclassifiable, full insert sequence
          Length = 1123

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 37  caacaacaacaacaaagtac 56
           ||||||||||||||||||||
Sbjct: 611 caacaacaacaacaaagtac 592



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>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 214029

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atgggtgatgatgatgataa 107
              ||||||||||||||||||||
Sbjct: 108892 atgggtgatgatgatgataa 108911



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 90      gggtgatgatgatgataaaactga 113
               |||||||||||||||||| |||||
Sbjct: 3317102 gggtgatgatgatgataatactga 3317125



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 38      aacaacaacaacaaagtact 57
               ||||||||||||||||||||
Sbjct: 6515540 aacaacaacaacaaagtact 6515559



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>gb|AC157935.3| Mus musculus chromosome 5, clone RP24-228K8, complete sequence
          Length = 147812

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 46980 caacaacaacaacaaagtac 46999



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>emb|BX819697.1|CNS0AAFY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS18ZE12 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1899

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gtggccaacaacaacaacaa 51
            ||||||||||||||||||||
Sbjct: 1298 gtggccaacaacaacaacaa 1317



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>emb|BX819612.1|CNS0A9Y1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB93ZH03 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1648

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 32   gtggccaacaacaacaacaa 51
            ||||||||||||||||||||
Sbjct: 1200 gtggccaacaacaacaacaa 1219



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>emb|BX819690.1|CNS0A9CS Arabidopsis thaliana Full-length cDNA Complete sequence from
          clone GSLTLS17ZH11 of Adult vegetative tissue of strain
          col-0 of Arabidopsis thaliana (thale cress)
          Length = 483

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 32 gtggccaacaacaacaacaa 51
          ||||||||||||||||||||
Sbjct: 40 gtggccaacaacaacaacaa 59



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>gb|AC087433.4|AC087433 Homo sapiens chromosome 15 clone RP11-101J17 and RP11-501G11 map 15q21.1,
              complete sequence
          Length = 185145

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 106349 caacaacaacaacaaagtac 106368



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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 37      caacaacaacaacaaagtactgta 60
               ||||||||||||||||||| ||||
Sbjct: 1393488 caacaacaacaacaaagtattgta 1393465



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>gb|BC094426.1| Mus musculus sine oculis-related homeobox 3 homolog (Drosophila),
            mRNA (cDNA clone MGC:117122 IMAGE:6855602), complete cds
          Length = 3408

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 36   ccaacaacaacaacaaagta 55
            ||||||||||||||||||||
Sbjct: 2882 ccaacaacaacaacaaagta 2901



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>gb|AC155938.6| Mus musculus 10 BAC RP24-421D7 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 157047

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     atgggtgatgatgatgataa 107
              ||||||||||||||||||||
Sbjct: 111782 atgggtgatgatgatgataa 111801



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>gb|AC115604.2| Dictyostelium discoideum chromosome 2 map 4354771-4414991 strain AX4,
             complete sequence
          Length = 60220

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    gtggccaacaacaacaacaa 51
             ||||||||||||||||||||
Sbjct: 26517 gtggccaacaacaacaacaa 26498



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>gb|AC109512.12| Homo sapiens chromosome 15, clone RP11-931B1, complete sequence
          Length = 189975

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   tggccaacaacaacaacaaa 52
            ||||||||||||||||||||
Sbjct: 2643 tggccaacaacaacaacaaa 2624



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>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489G09
          Length = 148707

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 38    aacaacaacaacaaagtact 57
             ||||||||||||||||||||
Sbjct: 83020 aacaacaacaacaaagtact 83039



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>gb|AC009046.4|AC009046 Homo sapiens chromosome 16 clone RP11-200H5, complete sequence
          Length = 153562

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 112    gaaagggttcttgaatcttg 131
              ||||||||||||||||||||
Sbjct: 130001 gaaagggttcttgaatcttg 130020



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>emb|AL772341.12| Mouse DNA sequence from clone RP23-179N22 on chromosome 2, complete
             sequence
          Length = 219412

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 32    gtggccaacaacaacaacaa 51
             ||||||||||||||||||||
Sbjct: 14904 gtggccaacaacaacaacaa 14923



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>emb|AL807744.7| Mouse DNA sequence from clone RP23-174C4 on chromosome X, complete
             sequence
          Length = 163576

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 90426 caacaacaacaacaaagtac 90445



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>dbj|AK072561.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133P17, full
            insert sequence
          Length = 3521

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 90   gggtgatgatgatgataaaactga 113
            |||||||||||||||||| |||||
Sbjct: 2285 gggtgatgatgatgataatactga 2308



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>gb|AC154661.2| Mus musculus BAC clone RP24-274N1 from 12, complete sequence
          Length = 159667

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 2686 caacaacaacaacaaagtac 2705



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>gb|AC154543.2| Mus musculus BAC clone RP23-228E21 from 12, complete sequence
          Length = 197876

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 175648 caacaacaacaacaaagtac 175667



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>gb|AC119928.8| Mus musculus chromosome 1, clone RP24-259F2, complete sequence
          Length = 174419

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 94265 caacaacaacaacaaagtac 94284



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>emb|BX936336.10| Zebrafish DNA sequence from clone CH211-287B5 in linkage group 19,
             complete sequence
          Length = 151787

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tgatgatgatgataaaactg 112
             ||||||||||||||||||||
Sbjct: 32475 tgatgatgatgataaaactg 32494



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>emb|AL772198.14| Zebrafish DNA sequence from clone CH211-194D6 in linkage group 9,
             complete sequence
          Length = 211682

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    caacaacaaagtactgtagg 62
             ||||||||||||||||||||
Sbjct: 55929 caacaacaaagtactgtagg 55948



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>dbj|AP003079.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-141E21, complete
             sequence
          Length = 166045

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 49841 caacaacaacaacaaagtac 49822



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>gb|AF102575.1|AF102575 Dictyostelium discoideum cell surface protein DTFA (dtfA) gene,
            complete cds
          Length = 4890

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 1927 caacaacaacaacaaagtac 1946



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 90      gggtgatgatgatgataaaactga 113
               |||||||||||||||||| |||||
Sbjct: 3325807 gggtgatgatgatgataatactga 3325830



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>emb|AL974313.6| Zebrafish DNA sequence from clone CH211-281M5, complete sequence
          Length = 185165

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 37    caacaacaacaacaaagtactgta 60
             ||||||||||||||| ||||||||
Sbjct: 52312 caacaacaacaacaacgtactgta 52289



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>emb|CT025562.10| Mouse DNA sequence from clone RP24-225O12 on chromosome 14, complete
             sequence
          Length = 194430

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    tgatgatgatgataaaactg 112
             ||||||||||||||||||||
Sbjct: 89187 tgatgatgatgataaaactg 89168



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    tgatgatgatgataaaactg 112
             ||||||||||||||||||||
Sbjct: 86011 tgatgatgatgataaaactg 86030



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>gb|AC138721.4| Mus musculus BAC clone RP23-157G22 from 6, complete sequence
          Length = 187385

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 37     caacaacaacaacaaagtac 56
              ||||||||||||||||||||
Sbjct: 115948 caacaacaacaacaaagtac 115929



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>gb|AC002546.1|AC002546 Homo sapiens chromosome 17, clone 193h18, complete sequence
          Length = 106420

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 36   ccaacaacaacaacaaagtactgt 59
            ||||||||||||||||| ||||||
Sbjct: 1181 ccaacaacaacaacaaaatactgt 1158



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>gb|AC102277.8| Mus musculus chromosome 1, clone RP24-297D13, complete sequence
          Length = 143532

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   caacaacaacaacaaagtac 56
            ||||||||||||||||||||
Sbjct: 5115 caacaacaacaacaaagtac 5096



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>gb|BT001194.1| Arabidopsis thaliana Unknown protein (At2g31070) mRNA, complete cds
          Length = 1176

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 32  gtggccaacaacaacaacaa 51
           ||||||||||||||||||||
Sbjct: 818 gtggccaacaacaacaacaa 837



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>emb|AL672253.7| Mouse DNA sequence from clone RP23-13G19 on chromosome 2, complete
             sequence
          Length = 182150

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    caacaacaacaacaaagtac 56
             ||||||||||||||||||||
Sbjct: 37761 caacaacaacaacaaagtac 37742


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,352,000
Number of Sequences: 3902068
Number of extensions: 3352000
Number of successful extensions: 863664
Number of sequences better than 10.0: 127
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 861190
Number of HSP's gapped (non-prelim): 2474
length of query: 203
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 181
effective length of database: 17,147,199,772
effective search space: 3103643158732
effective search space used: 3103643158732
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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