ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl56c07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 trans... 30 1.9
2GR98B_DROME (Q9VB26) Putative gustatory receptor 98b 28 7.1

>MTAL2_PICAN (Q707Y8) Mating-type protein ALPHA2 (MATalpha2 transcription|
           factor)
          Length = 163

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 136 DKTVAIQKELCFHISQDTRLPPNDI 210
           ++T+ I KEL   ++QDTR  PND+
Sbjct: 138 ERTLTISKELSDLLNQDTRCSPNDV 162



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>GR98B_DROME (Q9VB26) Putative gustatory receptor 98b|
          Length = 403

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = -2

Query: 357 CCTISKCTILPSIVANHCTNEHHCLTARAHIIRNWSICFKIYPPFHGL*NVIWR*SRVLR 178
           C T+    +LP +++  C N ++C     H IR    C    P F  L   +   S  + 
Sbjct: 297 CSTLLVNLLLPCLLSQRCINAYNCFPRILHKIR----CTSADPNFAMLTRGLREYSLQME 352

Query: 177 YVKTQFFLDG 148
           ++K +F   G
Sbjct: 353 HLKLRFTCGG 362


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,806,769
Number of Sequences: 219361
Number of extensions: 891780
Number of successful extensions: 1707
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1707
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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