>LGT_ARTAU (P60966) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 318

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +2

Query: 236 VPWKWGLHTLGPATGEFVLEA 298
           +PWK  +H + PATG+ VL A
Sbjct: 162 LPWKLQIHNMNPATGQAVLTA 182

>HSP70_LUPPO (P16121) Heat shock 70 kDa protein (Fragment)|
          Length = 257

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 289 NKLAGSWTKGVKAPFPRDESRICFVYYLQNNWCLVIS 179
           N L G +      P PRD  +I   + +  NWCL +S
Sbjct: 67  NNLLGKFELSGIPPAPRDVPQITVCFDIDANWCLNVS 103

>GATC_DROME (P91623) GATA-binding factor-C (Transcription factor GATA-C)|
           (dGATA-C) (Protein grain)
          Length = 486

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = -2

Query: 336 ERNEHSFRRRP---ENASRTNSPVAGPRV*RPHFH 241
           E N H  R  P   ++ SR  S  A P+V RPHFH
Sbjct: 92  ESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFH 126

>TNAA_SHIFL (P0A854) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)|
           (TNase)
          Length = 471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 119 PRI*KSASFQVNLDFLKEKKADYKAPIILQVIHET 223
           P +  SA F  N  F+K+++A+YK   I Q+  ET
Sbjct: 223 PVVMDSARFAENAYFIKQREAEYKDWTIEQITRET 257

>TNAA_ECOLI (P0A853) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)|
           (TNase)
          Length = 471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 119 PRI*KSASFQVNLDFLKEKKADYKAPIILQVIHET 223
           P +  SA F  N  F+K+++A+YK   I Q+  ET
Sbjct: 223 PVVMDSARFAENAYFIKQREAEYKDWTIEQITRET 257

>TNAA_ECOL6 (Q8FBV2) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)|
           (TNase)
          Length = 471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 119 PRI*KSASFQVNLDFLKEKKADYKAPIILQVIHET 223
           P +  SA F  N  F+K+++A+YK   I Q+  ET
Sbjct: 223 PVVMDSARFAENAYFIKQREAEYKDWTIEQITRET 257

>TNAA_ECO57 (Q8XB34) Tryptophanase (EC 4.1.99.1) (L-tryptophan indole-lyase)|
           (TNase)
          Length = 471

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 119 PRI*KSASFQVNLDFLKEKKADYKAPIILQVIHET 223
           P +  SA F  N  F+K+++A+YK   I Q+  ET
Sbjct: 223 PVVMDSARFAENAYFIKQREAEYKDWTIEQITRET 257

>VNSM_INSV (Q01268) Nonstructural protein NS-M|
          Length = 303

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 11/48 (22%)
 Frame = -1

Query: 226 ICFVYYLQNNW-----------CLVISLLFLQKIQINLKASTFLYSWT 116
           ICFV+YL  NW           C+ + LL  Q  + ++  ++ +YSWT
Sbjct: 176 ICFVFYL--NWSIPKVNNTSENCVQLHLLCDQVYKKDVSFASVMYSWT 221

>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 20)
           (ADAM-TS 20) (ADAM-TS20)
          Length = 1911

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/25 (56%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 232 TRPV--EMGPSHPWSSYRRVCSGSI 300
           TRPV  E GP  P+SS  R C G I
Sbjct: 552 TRPVNGEWGPWEPYSSCSRTCGGGI 576

>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 20)
           (ADAM-TS 20) (ADAM-TS20)
          Length = 1906

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = +1

Query: 232 TRPV--EMGPSHPWSSYRRVCSGSIFRTS 312
           TRPV  E GP  P+SS  R C G I  T+
Sbjct: 549 TRPVDGEWGPWGPYSSCSRTCGGGIKSTA 577

>MUTS_PROMA (Q7V9M5) DNA mismatch repair protein mutS|
          Length = 914

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 164 LKEKKADYKAPIILQVIHETDS*LVPWKWGLHTLGPATGEFVLEAFSG 307
           L+ KK ++ A I+++   +T+      KWGL +   +TGEF ++  +G
Sbjct: 206 LQAKKNNWLAAILIESNSQTNQ----LKWGLASADISTGEFTVKEGNG 249

>Y1748_WOLSU (Q7MR39) UPF0190 protein WS1748|
          Length = 311

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = -3

Query: 320 PSEDVLKMLPEQTRR*LDQGCEGPISTGRVKNLFRVLPAK*LVPCNQPSFPSKN 159
           PS+   K L +Q R  L  G    ++TG V NL   L  K   P      PS+N
Sbjct: 5   PSDVTPKELFDQRRSFLKLGAASVVATGSVSNLLAALKTK--APSPLSFIPSEN 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,959,633
Number of Sequences: 219361
Number of extensions: 1073662
Number of successful extensions: 2288
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2288
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 1402043640
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)