>gb|AC151735.3| Mus musculus BAC clone RP23-24D16 from 9, complete sequence
          Length = 201762

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 22    catgcctgtagttccattacag 43
             ||||||||||||||||||||||
Sbjct: 27967 catgcctgtagttccattacag 27946

>dbj|AP004956.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT34I04, TM0133,
             complete sequence
          Length = 106411

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 127   ataaaaaagtgctagctttcaa 148
             ||||||||||||||||||||||
Sbjct: 58702 ataaaaaagtgctagctttcaa 58681

>gb|AC140392.3| Mus musculus BAC clone RP24-89F9 from chromosome 9, complete sequence
          Length = 225973

 Score = 44.1 bits (22), Expect = 0.32
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 22     catgcctgtagttccattacag 43
              ||||||||||||||||||||||
Sbjct: 150176 catgcctgtagttccattacag 150155

>emb|AL663071.5| Mouse DNA sequence from clone RP23-446K7 on chromosome 11, complete
              sequence
          Length = 205845

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 164    ttgaaggaaaagaaggctgat 184
              |||||||||||||||||||||
Sbjct: 117279 ttgaaggaaaagaaggctgat 117299

>gb|AE009980.1| Streptococcus pyogenes strain MGAS8232, section 28 of 173 of the
            complete genome
          Length = 14132

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 158  gattttttgaaggaaaagaag 178
            |||||||||||||||||||||
Sbjct: 8747 gattttttgaaggaaaagaag 8727

>gb|AE014074.1| Streptococcus pyogenes MGAS315, complete genome
          Length = 1900521

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 158    gattttttgaaggaaaagaag 178
              |||||||||||||||||||||
Sbjct: 767556 gattttttgaaggaaaagaag 767536

>dbj|BA000034.2| Streptococcus pyogenes SSI-1 DNA, complete genome
          Length = 1894275

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 158     gattttttgaaggaaaagaag 178
               |||||||||||||||||||||
Sbjct: 1129200 gattttttgaaggaaaagaag 1129220

>gb|AC090227.10| Homo sapiens chromosome 18, clone RP11-813F20, complete sequence
          Length = 224366

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 325    ctcatttctttcctttggtct 345
              |||||||||||||||||||||
Sbjct: 185110 ctcatttctttcctttggtct 185090

>gb|AC102597.22| Mus musculus chromosome 18, clone RP23-361H2, complete sequence
          Length = 204401

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 86     caagtccaaattttaattat 105
              ||||||||||||||||||||
Sbjct: 119112 caagtccaaattttaattat 119093

>gb|AC116875.10| Mus musculus chromosome 8, clone RP24-426B21, complete sequence
          Length = 188938

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 344    cttcagacactttgcaatgctgct 367
              ||||||| ||||||||||||||||
Sbjct: 114035 cttcagagactttgcaatgctgct 114058

>gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, complete sequence
          Length = 191711

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   ttaatctggattttttgaag 169
             ||||||||||||||||||||
Sbjct: 84737 ttaatctggattttttgaag 84756

>gb|AC024202.1| Caenorhabditis elegans cosmid Y71H2B, complete sequence
          Length = 58518

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   tctggattttttgaaggaaaagaa 177
             |||||||||||| |||||||||||
Sbjct: 24124 tctggattttttcaaggaaaagaa 24101

>gb|AC146176.2| Pan troglodytes BAC clone RP43-24N3 from 7, complete sequence
          Length = 138742

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     ttccattacagtgccgacta 52
              ||||||||||||||||||||
Sbjct: 111560 ttccattacagtgccgacta 111541

>gb|AC124720.3| Mus musculus BAC clone RP23-387F14 from chromosome 5, complete sequence
          Length = 193210

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 170    gaaaagaaggctgattacaa 189
              ||||||||||||||||||||
Sbjct: 129058 gaaaagaaggctgattacaa 129077

>gb|AC122859.4| Mus musculus BAC clone RP23-133M12 from 6, complete sequence
          Length = 187791

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ttttttgaaggaaaagaagg 179
             ||||||||||||||||||||
Sbjct: 31777 ttttttgaaggaaaagaagg 31758

>emb|AL163282.2|HS21C082 Homo sapiens chromosome 21 segment HS21C082
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   agtgctcatttctttccttt 340
             ||||||||||||||||||||
Sbjct: 68683 agtgctcatttctttccttt 68664

>gb|AC109253.9| Mus musculus, clone RP23-351D8, complete sequence
          Length = 254578

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 146    caagttaatctggatttttt 165
              ||||||||||||||||||||
Sbjct: 187940 caagttaatctggatttttt 187921

>emb|AL355338.33| Human DNA sequence from clone RP11-12G12 on chromosome 13 Contains the
             gene for zinc finger protein of the cerebellum 5 (ZIC5),
             the ZIC2 gene for Zic family member 2 (odd-paired homolog
             Drosophila), a 13kDa differentiation-associated protein
             (DAP13) pseudogene, an asparagine synthetase (ASNS)
             pseudogene, the 5' end of the PCCA gene for propionyl
             Coenzyme A carboxylase alpha polypeptide and seven CpG
             islands, complete sequence
          Length = 153762

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 170   gaaaagaaggctgattacaaggca 193
             ||||||||||||||| ||||||||
Sbjct: 21543 gaaaagaaggctgatcacaaggca 21520

>gb|AC092554.3| Papio anubis clone RP41-414G17, complete sequence
          Length = 167543

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     tgcatgcctgtagttccattacag 43
              |||||||||||||||||| |||||
Sbjct: 103704 tgcatgcctgtagttccactacag 103727

>gb|AE010131.1| Pyrococcus furiosus DSM 3638, section 6 of 173 of the complete genome
          Length = 11112

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 149  gttaatctggattttttgaaggaa 172
            ||||| ||||||||||||||||||
Sbjct: 4364 gttaagctggattttttgaaggaa 4387

>dbj|AK141102.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length
           enriched library, clone:C230052E06 product:hypothetical
           protein, full insert sequence
          Length = 4171

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  catgcctgtagttccattac 41
           ||||||||||||||||||||
Sbjct: 132 catgcctgtagttccattac 151

>gb|AC008442.6| Homo sapiens chromosome 5 clone CTC-331P4, complete sequence
          Length = 171937

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    atcgctcaagtccaaatttt 99
             ||||||||||||||||||||
Sbjct: 67747 atcgctcaagtccaaatttt 67728

>gb|AC010254.6| Homo sapiens chromosome 5 clone CTC-434O11, complete sequence
          Length = 172300

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 80     atcgctcaagtccaaatttt 99
              ||||||||||||||||||||
Sbjct: 138752 atcgctcaagtccaaatttt 138771

>dbj|AK083812.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130013I17
           product:unclassifiable, full insert sequence
          Length = 2863

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 285 ttgttctggaagcattttca 304
           ||||||||||||||||||||
Sbjct: 317 ttgttctggaagcattttca 298

>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 116     tgtccaagaatataaaaaagtgct 139
               |||||||||||||| |||||||||
Sbjct: 2121630 tgtccaagaatatagaaaagtgct 2121607

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 242      tggaaatggggccttcacacccttggtc 269
                ||||||||||| ||||| ||||||||||
Sbjct: 13283535 tggaaatgggggcttcatacccttggtc 13283508

>emb|BX679674.3| Mouse DNA sequence from clone RP23-66H6 on chromosome X, complete
              sequence
          Length = 205905

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    ttgttctggaagcattttca 304
              ||||||||||||||||||||
Sbjct: 115198 ttgttctggaagcattttca 115217

>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0622F08
          Length = 140628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 242   tggaaatggggccttcacacccttggtc 269
             ||||||||||| ||||| ||||||||||
Sbjct: 91462 tggaaatgggggcttcatacccttggtc 91435

>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1521_G01
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 242  tggaaatggggccttcacacccttggtc 269
            ||||||||||| ||||| ||||||||||
Sbjct: 8786 tggaaatgggggcttcatacccttggtc 8759

>gb|AC024861.1|AC024861 Caenorhabditis elegans clone Y71H2B, complete sequence
          Length = 58518

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   tctggattttttgaaggaaaagaa 177
             |||||||||||| |||||||||||
Sbjct: 24124 tctggattttttcaaggaaaagaa 24101

>emb|AL592062.11| Zebrafish DNA sequence from clone XX-6CSE, complete sequence
          Length = 106778

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     gaaaataatctgcattgcat 24
             ||||||||||||||||||||
Sbjct: 52903 gaaaataatctgcattgcat 52884

>emb|AL954231.3|PTB144O12 Pan troglodytes chromosome 22 BAC PTB-144O12, complete sequence
          Length = 180638

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    agtgctcatttctttccttt 340
              ||||||||||||||||||||
Sbjct: 138602 agtgctcatttctttccttt 138583

>emb|AL954232.2|RP43039B12 Pan troglodytes chromosome 22 BAC RP43-039B12, complete sequence
          Length = 201761

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 321    agtgctcatttctttccttt 340
              ||||||||||||||||||||
Sbjct: 146806 agtgctcatttctttccttt 146787

>emb|AL954233.1|RP43116M22 Pan troglodytes chromosome 22 BAC RP43-116M22, complete sequence
          Length = 163163

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   agtgctcatttctttccttt 340
             ||||||||||||||||||||
Sbjct: 32166 agtgctcatttctttccttt 32147

>gb|AF042091.1|AF042091 Homo sapiens chromosome 21q22.3 PAC 267O10, complete sequence
          Length = 121019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   agtgctcatttctttccttt 340
             ||||||||||||||||||||
Sbjct: 22229 agtgctcatttctttccttt 22210

>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 150   ttaatctggattttttgaag 169
             ||||||||||||||||||||
Sbjct: 39130 ttaatctggattttttgaag 39111


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,475,725
Number of Sequences: 3902068
Number of extensions: 4475725
Number of successful extensions: 115995
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 115855
Number of HSP's gapped (non-prelim): 140
length of query: 379
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 357
effective length of database: 17,147,199,772
effective search space: 6121550318604
effective search space used: 6121550318604
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)