>AERA_AERSO (Q06304) Aerolysin precursor (Hemolysin)|
          Length = 488

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +2

Query: 59  KDQNHPKTQTYRQRKRLQTTT*FSSIFRQPRVDP--IIISVAAIEH-ARHRATETSKALD 229
           K  N  KT TY   +++ T     + F+ P V    + I +AA +  A  +   T++ + 
Sbjct: 246 KATNWSKTDTYSLSEKVTT----KNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVS 301

Query: 230 REARETVAPYSMLSV 274
            EAR TV P+S L V
Sbjct: 302 VEARPTVPPHSSLPV 316

>BAS1_YEAST (P22035) Myb-like DNA-binding protein BAS1|
          Length = 811

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 70  PS*NTDIQATEKATNNDIVQFNFSATTRRPH 162
           P  NT I     ATNN+I+Q N SA +  P+
Sbjct: 563 PQANTLIPTNSTATNNEIIQGNVSANSMSPN 593

>AERA_AERSA (Q08676) Aerolysin precursor (Hemolysin-3)|
          Length = 489

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
 Frame = +2

Query: 59  KDQNHPKTQTYRQRKRLQTTT*FSSIFRQPRVDP--IIISVAAIEH-ARHRATETSKALD 229
           K  N  KT TY   +++ T     + F+ P V    + I +AA +  A  +   T++ + 
Sbjct: 247 KATNWSKTDTYSLSEKVTT----KNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVS 302

Query: 230 REARETVAPYSMLSV 274
            EAR TV P+S L V
Sbjct: 303 VEARPTVPPHSSLPV 317

>VE7_HPV25 (P36823) Protein E7|
          Length = 102

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 143 QPRVDPIIISVAAIEHARHRATETSKALDREARETVAP 256
           QP V P+ +       A H+ TE   A+DR   + VAP
Sbjct: 19  QPEVQPVDLFCEEELPAEHQETEEEPAIDRTPYKVVAP 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,126,595
Number of Sequences: 219361
Number of extensions: 713114
Number of successful extensions: 1609
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)