Clone Name | rbastl56a12 |
---|---|
Clone Library Name | barley_pub |
>SCRB_KLEPN (P27217) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 465 Score = 30.8 bits (68), Expect = 0.84 Identities = 10/18 (55%), Positives = 15/18 (83%) Frame = +2 Query: 224 TTAPELHWRHQPLVLLPD 277 ++A LHWRH+P+ L+PD Sbjct: 73 SSADLLHWRHEPIALMPD 90
>ACA1_ARATH (Q37145) Calcium-transporting ATPase 1, chloroplast precursor (EC| 3.6.3.8) (Ca(2+)-ATPase isoform 1) (Plastid envelope ATPase 1) Length = 1020 Score = 28.9 bits (63), Expect = 3.2 Identities = 11/16 (68%), Positives = 15/16 (93%) Frame = -3 Query: 364 IGMPIAAIVKLIPVGS 317 +GMP+AA +K+IPVGS Sbjct: 1004 LGMPVAAALKMIPVGS 1019
>ZN493_HUMAN (Q6ZR52) Zinc finger protein 493| Length = 646 Score = 28.5 bits (62), Expect = 4.2 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 8/78 (10%) Frame = +3 Query: 18 QAYHTISSF--NTPRKIT*KKKLQGVYQTLLKNQAHSLGSSSKDQMQKKKEGHRFT*I-- 185 + Y+ ++ + T KI K V+ LL + H+ + K + KK G F + Sbjct: 9 EGYNELNQYLTTTQSKIFQCDKYVKVFHKLLNSNRHNTKHTGKKPFKCKKCGKSFCMLLH 68 Query: 186 ----KRINSRKNSFLCSQ 227 KRI+ R+NS+ C + Sbjct: 69 LCQHKRIHIRENSYRCEE 86
>SCRB_SALTY (P37075) Sucrose-6-phosphate hydrolase (EC 3.2.1.26) (Sucrase)| (Invertase) Length = 466 Score = 28.5 bits (62), Expect = 4.2 Identities = 8/13 (61%), Positives = 12/13 (92%) Frame = +2 Query: 239 LHWRHQPLVLLPD 277 LHW+H+P+ L+PD Sbjct: 79 LHWQHEPIALMPD 91
>PZRN4_HUMAN (Q6ZMN7) PDZ domain-containing RING finger protein 4 (Ligand of| Numb-protein X 4) (SEMACAP3-like protein) Length = 1036 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = -2 Query: 125 KTVGLILQKCLIDPL*FLF--SCYFPWSVET*NCMISLQP 12 K G +L++ L P +F SC PW+V C + QP Sbjct: 19 KLCGQVLEEPLCTPCGHVFCASCLLPWAVRRRRCPLQCQP 58
>DNSL1_HUMAN (P49184) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (Muscle-specific DNase I-like) (DNase X) (XIB) Length = 302 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 242 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 352 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>DNSL1_CERAE (Q2QDF1) Deoxyribonuclease I-like 1 precursor (EC 3.1.21.-) (DNase| I-like 1) (DNase X) Length = 302 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +2 Query: 242 HWRHQPLVLLPDFSS*PEISCRLLLRTHRDKLDYRSD 352 HW+ + ++LL DF++ C L + DKL+ R++ Sbjct: 171 HWQSKDVILLGDFNA----DCASLTKKRLDKLELRTE 203
>SL9A3_HUMAN (P48764) Sodium/hydrogen exchanger 3 (Na(+)/H(+) exchanger 3)| (NHE-3) (Solute carrier family 9 member 3) Length = 834 Score = 27.7 bits (60), Expect = 7.2 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -2 Query: 206 LSAINPFYLGESMAFFFLLHLIFRGRAKTVGLILQKCLID 87 +SA+NPF + AF LL L+F + +G++LQ L++ Sbjct: 356 ISAVNPFIWTWNTAFV-LLTLVFISVYRAIGVVLQTWLLN 394
>YL92_SCHPO (Q9HFF2) Hypothetical protein C683.02c in chromosome I| Length = 218 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 3/44 (6%) Frame = +3 Query: 108 NQAHSLGSSSKDQMQKKKEGHRFT*IKRINSRKNS---FLCSQQ 230 N S GSS + ++KK+ + ++RIN R F C QQ Sbjct: 42 NMKASFGSSKRYDERQKKKRSEYRRLRRINQRNRDKFCFACRQQ 85 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,344,461 Number of Sequences: 219361 Number of extensions: 801237 Number of successful extensions: 1531 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1527 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1531 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)