>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                      
Query: 232     ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 286
               ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 7741627 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 7741573



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 137      agcaacatactactagtacta 157
                |||||||||||||||||||||
Sbjct: 35686192 agcaacatactactagtacta 35686212



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 139      caacatactactagtactaa 158
                ||||||||||||||||||||
Sbjct: 40019904 caacatactactagtactaa 40019923

>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0010K01
          Length = 144404

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                    
Query: 232   ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 286
             ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 44208 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 44154

>dbj|AK122130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B05, full
            insert sequence
          Length = 3604

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 232  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 286
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 3475 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 3421

>dbj|AK070058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023041N23, full
            insert sequence
          Length = 1619

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 232  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 286
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 1374 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 1320

>dbj|AK067723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J03, full
            insert sequence
          Length = 3671

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 50/55 (90%)
 Strand = Plus / Minus

                                                                   
Query: 232  ccctaccggaatcaatggcacggcccacagacagctagaacaaccaagaacaccg 286
            ||||||||| ||||||||||||| ||||| ||||| || ||||||||||||||||
Sbjct: 3420 ccctaccggcatcaatggcacggtccacatacagcaaggacaaccaagaacaccg 3366

>dbj|AP004366.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0460C04
          Length = 189043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 137   agcaacatactactagtacta 157
             |||||||||||||||||||||
Sbjct: 89529 agcaacatactactagtacta 89549

>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 275     ccaagaacaccgccgctagct 295
               |||||||||||||||||||||
Sbjct: 1229861 ccaagaacaccgccgctagct 1229881

>emb|AJ333681.1|HSA333681 Homo sapiens genomic sequence surrounding NotI site, clone
           HSJ-BL4RS
          Length = 726

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 7   ggaactaaatagctggacccc 27
           |||||||||||||||||||||
Sbjct: 345 ggaactaaatagctggacccc 365

>gb|AC154746.2| Mus musculus BAC clone RP24-396N7 from chromosome 14, complete sequence
          Length = 184783

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    aacaaccacccatatatggt 91
             ||||||||||||||||||||
Sbjct: 26055 aacaaccacccatatatggt 26074

>gb|AC105075.6| Mus musculus chromosome 1, clone RP23-366P11, complete sequence
          Length = 195511

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    ccacagacagctagaacaac 275
              ||||||||||||||||||||
Sbjct: 148060 ccacagacagctagaacaac 148079

>emb|CR788255.6| Zebrafish DNA sequence from clone DKEY-9C18 in linkage group 2, complete
              sequence
          Length = 210464

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 264    agctagaacaaccaagaaca 283
              ||||||||||||||||||||
Sbjct: 153678 agctagaacaaccaagaaca 153659

>emb|AL591070.19| Mouse DNA sequence from clone RP23-185A18 on chromosome 11 Contains the
             3' end of a novel gene, Traf4 gene for Tnf receptor
             associated factor 4, the Nek8 gene for NIMA (never in
             mitosis gene a)-related expressed kinase 8, six novel
             genes, the Rpl23a gene for ribosomal protein L23a, the
             Rab34 gene for RAB34 member of RAS oncogene family, the
             Supt6h gene for suppressor of Ty 6 homolog (S.
             cerevisiae), the Sdf2 gene for stromal cell derived factor
             2, the Spag5 gene for sperm associated antigen 5, the
             Aldo3 gene for aldolase 3 C isoform, the Pigs gene for
             phosphatidylinositol glycan class S and the Unc119 gene
             for unc-119 homolog (C. elegans), complete sequence
          Length = 233242

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     ctgaggggaactaaatagct 20
             ||||||||||||||||||||
Sbjct: 71139 ctgaggggaactaaatagct 71120

>dbj|AP003451.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0413C03
          Length = 162161

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 139    caacatactactagtactaa 158
              ||||||||||||||||||||
Sbjct: 111355 caacatactactagtactaa 111374

>gb|AC004807.1|AC004807 Mus musculus chromosome 11, clone mCIT.268_P_23, complete sequence
          Length = 110970

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     ctgaggggaactaaatagct 20
             ||||||||||||||||||||
Sbjct: 97450 ctgaggggaactaaatagct 97469


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,077,977
Number of Sequences: 3902068
Number of extensions: 3077977
Number of successful extensions: 55737
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55621
Number of HSP's gapped (non-prelim): 116
length of query: 371
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 349
effective length of database: 17,147,199,772
effective search space: 5984372720428
effective search space used: 5984372720428
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)