>HAP1_HAEIN (P44596) Adhesion and penetration protein precursor (EC 3.4.21.-)|
          Length = 1409

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = +2

Query: 113 GVQPSCLSTDC-RGEKAAMELCLTIVLRSTR*TNYFP*KWAQ-KINNRNRATVKVINALA 286
           GV P+  +T C R +   +  C T+ L  T+  N  P       IN  N ATV +     
Sbjct: 705 GVVPNXQNTICTRSDWTGLTTCKTVNLTDTKVINSIPITQINGSINLTNNATVNIHGLAK 764

Query: 287 TRTHVTAPDHSSSSMKQNSEE 349
              +VT  DHS  ++  N+ +
Sbjct: 765 LNGNVTLIDHSQFTLSNNATQ 785

>STE3_YEAST (P06783) Pheromone a factor receptor|
          Length = 470

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = +1

Query: 52  RIFNYCLSRFSSALNLLTAAWRTTVLF 132
           ++F Y ++R++   NLL+  W TTVL+
Sbjct: 135 QVFRYGIARYNGCQNLLSPTWITTVLY 161

>BORG4_MOUSE (Q9JM96) Cdc42 effector protein 4 (Binder of Rho GTPases 4)|
          Length = 349

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/17 (64%), Positives = 13/17 (76%)
 Frame = -2

Query: 366 APSRRGSSEFCFIDEEE 316
           AP R+   EFCF+DEEE
Sbjct: 327 APPRQPDKEFCFMDEEE 343

>CYLN2_RAT (O55156) Cytoplasmic linker protein 2 (Cytoplasmic linker protein|
            115) (CLIP-115)
          Length = 1046

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = +3

Query: 138  LIAEGKRQQWNSV*LLCSAQHAELI----ISPKNGRKK*TTVTGLQSR*SMLSPRELMLQ 305
            L+AE + Q   S   LCSAQH+ +I    +S +  R K  TV GLQ + +        L 
Sbjct: 788  LVAENRLQAVES---LCSAQHSHVIESNDLSEEKIRMK-ETVEGLQDKLNKRDKEVAALT 843

Query: 306  RQTILLHQ*SKTLKNLFCSAQVQTETL 386
             Q  +L      L+N   S + + ++L
Sbjct: 844  SQMDMLRAQVSALENKCKSGEKKIDSL 870

>CYLN2_MOUSE (Q9Z0H8) Cytoplasmic linker protein 2 (Cytoplasmic linker protein|
            115) (CLIP-115)
          Length = 1047

 Score = 28.1 bits (61), Expect = 5.2
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
 Frame = +3

Query: 138  LIAEGKRQQWNSV*LLCSAQHAELI----ISPKNGRKK*TTVTGLQSR*SMLSPRELMLQ 305
            L+AE + Q   S   LCSAQH+ +I    +S +  R K  TV GLQ + +        L 
Sbjct: 789  LVAENRLQAAES---LCSAQHSHVIESSDLSEETIRMK-ETVEGLQDKLNKRDKEVTALT 844

Query: 306  RQTILLHQ*SKTLKNLFCSAQVQTETL 386
             Q  +L      L+N   S + + ++L
Sbjct: 845  SQMDMLRAQVSALENKCKSGEKKIDSL 871

>UXAC_BACLD (Q65F21) Uronate isomerase (EC 5.3.1.12) (Glucuronate isomerase)|
           (Uronic isomerase)
          Length = 473

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = -1

Query: 283 ESIDHLDCSPVTVVYFLRPFLGEIISSAC 197
           +S+D  D  P T++Y L P    +ISS C
Sbjct: 333 DSLDRKDALPKTILYSLNPRDNVVISSLC 361

>Y539_AQUAE (O66818) Hypothetical protein aq_539|
          Length = 285

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +1

Query: 25  FISFRIASYRIFNYCLSRFSSALNLLTAAWRTTVLFE 135
           F SFRI+ +RIF YC   F +   L++A    T+L E
Sbjct: 85  FYSFRISDFRIFLYCSIPFLTFF-LISALLSNTLLEE 120

>TACY_LISIV (P31831) Ivanolysin precursor (Thiol-activated cytolysin)|
          Length = 528

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +2

Query: 233 QKINNRNRATVKVINALATRTHVTAPDHSSSSMKQNSEEPL 355
           +K  N+N A ++VIN+LA+ T+  A   ++S + +N  + L
Sbjct: 104 KKSINQNNADIQVINSLASLTYPGALVKANSELVENQPDVL 144


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,940,274
Number of Sequences: 219361
Number of extensions: 941938
Number of successful extensions: 2044
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)