>emb|AJ131403.1|PVI131403 Potato virus A RNA complete genome, isolate TamMV
          Length = 9605

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 20   ccatttccagtgctccactat 40
            |||||||||||||||||||||
Sbjct: 2609 ccatttccagtgctccactat 2589

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 4      acaaaggacaatgcttccatt 24
              |||||||||||||||||||||
Sbjct: 415763 acaaaggacaatgcttccatt 415783

>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 42.1 bits (21), Expect = 0.86
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 35    cactataaatatcaatggata 55
             |||||||||||||||||||||
Sbjct: 41306 cactataaatatcaatggata 41286

>gb|AC124576.4| Mus musculus BAC clone RP23-162H6 from chromosome 16, complete sequence
          Length = 233527

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    gtaaaaagaagagacaggaa 241
              ||||||||||||||||||||
Sbjct: 228327 gtaaaaagaagagacaggaa 228346

>gb|AC127246.3| Mus musculus BAC clone RP24-424L20 from chromosome 16, complete
             sequence
          Length = 181475

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 222   gtaaaaagaagagacaggaa 241
             ||||||||||||||||||||
Sbjct: 74304 gtaaaaagaagagacaggaa 74285

>gb|AC163723.3| Mus musculus BAC clone RP23-450O11 from chromosome 16, complete sequence
          Length = 181338

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 222    gtaaaaagaagagacaggaa 241
              ||||||||||||||||||||
Sbjct: 122502 gtaaaaagaagagacaggaa 122483

>emb|AL359748.11| Human DNA sequence from clone RP11-158C4 on chromosome 13, complete
             sequence
          Length = 39764

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    cttccatttccagtgctcca 36
             ||||||||||||||||||||
Sbjct: 24124 cttccatttccagtgctcca 24143

>gb|AC136504.23| Medicago truncatula clone mth2-13m6, complete sequence
          Length = 107180

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    acatgacacatctataaaat 85
             ||||||||||||||||||||
Sbjct: 60900 acatgacacatctataaaat 60919

>emb|BX890605.4| Mouse DNA sequence from clone RP23-29K12 on chromosome 2, complete
             sequence
          Length = 148620

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   agaagagacaggaaggcccc 247
             ||||||||||||||||||||
Sbjct: 87876 agaagagacaggaaggcccc 87895

>gb|AC007684.3| Homo sapiens BAC clone RP11-449G16 from 2, complete sequence
          Length = 196848

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 154   tacctggtcctaataaaaacaaat 177
             ||||||||||||||||||| ||||
Sbjct: 70952 tacctggtcctaataaaaaaaaat 70929

>gb|AC006210.4| Homo sapiens X BAC GS1-309P15 (Genome Systems Human BAC Library)
             complete sequence
          Length = 185638

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    atgacacatctataaaatgtccaa 91
             ||||||||||||||| ||||||||
Sbjct: 65207 atgacacatctataatatgtccaa 65184

>emb|CT573324.3| CH251-10E6, complete sequence
          Length = 169419

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 68    atgacacatctataaaatgtccaa 91
             ||||||||||||||| ||||||||
Sbjct: 61717 atgacacatctataatatgtccaa 61694

>emb|CR385063.6| Zebrafish DNA sequence from clone CH211-250G4 in linkage group 19,
             complete sequence
          Length = 72609

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    gagggacatgacacatctat 80
             ||||||||||||||||||||
Sbjct: 51430 gagggacatgacacatctat 51449


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,122,278
Number of Sequences: 3902068
Number of extensions: 3122278
Number of successful extensions: 60209
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 60184
Number of HSP's gapped (non-prelim): 25
length of query: 262
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 240
effective length of database: 17,147,199,772
effective search space: 4115327945280
effective search space used: 4115327945280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)