>SYH_MYCPA (P60917) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 420

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +2

Query: 116 RGRPSIVYEAPRLGRRTAKISASRQEEHGAFQARKLQRLQPVEEELDEKFAEVL 277
           RG    +  A R G R A +   R  + G    + LQ    V  ELD   AEVL
Sbjct: 362 RGLKGAMRAADRSGARIALVLGDRDIDAGTVGVKDLQTGSQVSVELDSVVAEVL 415

>I5P2_HUMAN (P32019) Type II inositol-1,4,5-trisphosphate 5-phosphatase|
           precursor (EC 3.1.3.36) (Phosphoinositide 5-phosphatase)
           (5PTase) (75 kDa inositol polyphosphate-5-phosphatase)
          Length = 993

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -2

Query: 123 LPLVFGSPVT*ICLLRP*IFEWRLCTISQLCSM 25
           LP  FGSP+  +C +R  I +  L TIS+L  M
Sbjct: 780 LPSCFGSPIHTLCYMREPILDLPLETISELTLM 812

>SMBP2_HUMAN (P38935) DNA-binding protein SMUBP-2 (EC 3.6.1.-) (ATP-dependent|
           helicase IGHMBP2) (Immunoglobulin mu-binding protein 2)
           (SMUBP-2) (Glial factor 1) (GF-1)
          Length = 993

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +1

Query: 142 SSQAWKEDGKNLSQQAGRARRISGQEASAPPASGR 246
           S  A K  G   S + G  R+  GQEA+AP   GR
Sbjct: 660 SHAATKPQGPATSTRTGSQRQEGGQEAAAPARQGR 694

>PO23_POPJA (Q05118) Retrovirus-related Pol polyprotein from type-1|
           retrotransposable element R2 (Retrovirus-related Pol
           polyprotein from type I retrotransposable element R2)
           [Includes: Reverse transcriptase (EC 2.7.7.49);
           Endonuclease] (Fragment)
          Length = 606

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 15/39 (38%), Positives = 22/39 (56%)
 Frame = -3

Query: 242 PLAGGAEASWPEMRRALPACWLRFLPSSFQAWELHTQLK 126
           PL  GA   WP  R  +P C +  +P++ +A  +HT LK
Sbjct: 543 PLLLGARGIWP--RANVPTCNILSIPTTLRASCVHTCLK 579

>AKH2_MAIZE (P49080) Bifunctional aspartokinase/homoserine dehydrogenase 2,|
           chloroplast precursor (AK-HD 2) (AK-HSDH 2) [Includes:
           Aspartokinase (EC 2.7.2.4); Homoserine dehydrogenase (EC
           1.1.1.3)]
          Length = 917

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +2

Query: 89  IQVTGLPNTRGRPSIVYEAPR-LGRRTAKISASRQEEHGAFQARKLQRLQPVEEELDEKF 265
           ++ TG+    G  S ++ A + +G     IS +   EH    A   + +  V  EL ++F
Sbjct: 413 VEGTGMAGVPGTASAIFSAVKDVGANVIMISQA-SSEHSVCFAVPEKEVAVVSAELHDRF 471

Query: 266 AEVLDPGRQRSVD 304
            E L  GR   V+
Sbjct: 472 REALAAGRLSKVE 484

>TRPB_MYCIT (O68905) Tryptophan synthase beta chain (EC 4.2.1.20)|
          Length = 421

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 14/29 (48%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +2

Query: 110 NTRGRPSIVYEAPRLGRRT-AKISASRQE 193
           N  GRPS +YEAPRL  +  A+I   R++
Sbjct: 74  NYAGRPSPLYEAPRLSEQAGARIFLKRED 102

>OXAA_DEIRA (Q9RSH5) Membrane protein oxaA|
          Length = 428

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = +2

Query: 218 KLQRLQPVEEELDEKFAEVLDPGRQRSV 301
           ++Q +QP+++E+ EK+    DP  QR++
Sbjct: 241 RMQLVQPLQKEIQEKYKGKTDPESQRAM 268

>GLUB7_ORYSA (Q52PJ1) Glutelin type-B 7 precursor [Contains: Glutelin type-B 7|
           acidic chain; Glutelin type-B 7 basic chain]
          Length = 495

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 131 IVYEAPRLGRRTAK-ISASRQEEHGAFQARKLQRLQP 238
           +V  A R+ R  A+ I  +R EEHGAF  R  Q+  P
Sbjct: 447 VVANAYRISREQARSIKNNRGEEHGAFTPRFQQQYYP 483

>GLUB2_ORYSA (Q02897) Glutelin type-B 2 precursor [Contains: Glutelin type-B 2|
           acidic chain; Glutelin type-B 2 basic chain]
          Length = 495

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = +2

Query: 131 IVYEAPRLGRRTAK-ISASRQEEHGAFQARKLQRLQP 238
           +V  A R+ R  A+ I  +R EEHGAF  R  Q+  P
Sbjct: 447 VVANAYRISREQARSIKNNRGEEHGAFTPRFQQQYYP 483


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,625,735
Number of Sequences: 219361
Number of extensions: 1001199
Number of successful extensions: 2956
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)