ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY111316.1| Zea mays CL12529_1 mRNA sequence 64 3e-07
2ref|NM_185137.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.018
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.018
4emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chr... 48 0.018
5emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on ch... 48 0.018
6gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, comp... 48 0.018
7gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic ... 48 0.018
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
9gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, comp... 48 0.018
10dbj|AK104830.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
11dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
12emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chr... 46 0.072
13gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complet... 42 1.1
14gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complet... 42 1.1
15gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds 40 4.5
16gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete se... 40 4.5
17emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chr... 40 4.5
18emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on ch... 40 4.5
19emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chr... 40 4.5
20emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chro... 40 4.5
21emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G... 40 4.5
22emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P1... 40 4.5
23emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 ... 40 4.5
24emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 o... 40 4.5
25gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, c... 40 4.5
26emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B... 40 4.5
27gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Canc... 40 4.5
28gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, com... 40 4.5
29gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, com... 40 4.5
30emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in... 40 4.5
31dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA,... 40 4.5
32gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complet... 40 4.5
33gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5,... 40 4.5
34gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, comple... 40 4.5
35gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, compl... 40 4.5
36gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clon... 40 4.5
37emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMW... 40 4.5
38gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 40 4.5
39dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 4.5
40dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 4.5
41dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.5
42emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from... 40 4.5
43emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4... 40 4.5
44emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chr... 40 4.5
45dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 4.5 
>gb|AY111316.1| Zea mays CL12529_1 mRNA sequence
          Length = 1152

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 38/40 (95%)
 Strand = Plus / Plus

                                                   
Query: 275 ttccgcgaaaacgatggcaacggcgcaccttcttggggcc 314
           ||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 369 ttccgtgaaaacgatggcagcggcgcaccttcttggggcc 408
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>ref|NM_185137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2834

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 281  gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
            ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 2540 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 2497
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 281      gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
                ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 34383674 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 34383631
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>emb|AL353582.16| Human DNA sequence from clone CTD-2190D5 on chromosome 20 Contains
             ESTs, STSs and GSSs, complete sequence
          Length = 115551

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 61    tcaaaactcaactgtatttctata 84
             ||||||||||||||||||||||||
Sbjct: 81214 tcaaaactcaactgtatttctata 81237
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>emb|AL138751.18| Human DNA sequence from clone RP11-346E17 on chromosome 9 Contains the
             5' end of a novel gene (CGI-67), a novel gene, a novel
             gene (LOC138240) and a CpG island, complete sequence
          Length = 195844

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||||||||||||||||||||||
Sbjct: 99133 caaaactcaactgtatttctatac 99110
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>gb|AC091956.3| Homo sapiens chromosome 5 clone RP11-430F16, complete sequence
          Length = 209754

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||||||||||||||||||||||
Sbjct: 72435 caaaactcaactgtatttctatac 72412
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>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete
             sequence
          Length = 115393

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 281   gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
             ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 66020 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 66063
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                            
Query: 281      gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
                ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 34474146 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 34474103
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>gb|AC139497.3| Homo sapiens chromosome 5 clone RP11-855C21, complete sequence
          Length = 199004

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                      
Query: 62     caaaactcaactgtatttctatac 85
              ||||||||||||||||||||||||
Sbjct: 126557 caaaactcaactgtatttctatac 126580
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>dbj|AK104830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A01, full
           insert sequence
          Length = 880

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                       
Query: 281 gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
           ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 563 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 520
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>dbj|AK067902.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013121O19, full
            insert sequence
          Length = 3031

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 281  gaaaacgatggcaacggcgcaccttcttggggccgtaggatgac 324
            ||||| ||||||||||| || |||||||| ||||| ||||||||
Sbjct: 2687 gaaaatgatggcaacggagcgccttcttgtggccgcaggatgac 2644
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>emb|AL358434.16| Human DNA sequence from clone RP11-471P6 on chromosome 1 Contains the 5'
              end of the XPR1 gene for xenotropic and polytropic
              retrovirus receptor, complete sequence
          Length = 178375

 Score = 46.1 bits (23), Expect = 0.072
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 62     caaaactcaactgtatttctata 84
              |||||||||||||||||||||||
Sbjct: 153626 caaaactcaactgtatttctata 153604
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>gb|AC114788.4| Homo sapiens BAC clone RP11-648F7 from 2, complete sequence
          Length = 116951

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 61    tcaaaactcaactgtatttctatac 85
             ||||||||||| |||||||||||||
Sbjct: 35876 tcaaaactcaattgtatttctatac 35852
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>gb|AC009226.3| Homo sapiens BAC clone RP11-167C7 from 2, complete sequence
          Length = 138778

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 61    tcaaaactcaactgtatttctatac 85
             |||||| ||||||||||||||||||
Sbjct: 14323 tcaaaaatcaactgtatttctatac 14347
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>gb|AF461899.1| Homo sapiens FP6628 mRNA, complete cds
          Length = 3102

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 62   caaaactcaactgtatttctatac 85
            ||||| ||||||||||||||||||
Sbjct: 1838 caaaaatcaactgtatttctatac 1861
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>gb|AC141112.7| Medicago truncatula clone mth2-15m12, complete sequence
          Length = 135248

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 76    atttctatactgtaaaactatatc 99
             ||||||||| ||||||||||||||
Sbjct: 57869 atttctataatgtaaaactatatc 57892
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>emb|AL591901.12| Human DNA sequence from clone RP11-400C4 on chromosome 1, complete
             sequence
          Length = 129844

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 195   tgtgcagaggccctgtcatg 214
             ||||||||||||||||||||
Sbjct: 81163 tgtgcagaggccctgtcatg 81182
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>emb|AL359914.14| Human DNA sequence from clone RP11-637B23 on chromosome X Contains a H3
             histone, family 3B (H3F3B) pseudogene, the BMP15 gene for
             bone morphogenetic protein 15, and a high-mobility group
             box 1 (HMGB1) pseudogene, complete sequence
          Length = 125495

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||||||||||| ||||||||||
Sbjct: 74522 caaaactcaactgaatttctatac 74545
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>emb|AL390739.8| Human DNA sequence from clone RP11-157F14 on chromosome 13 Contains two
             CpG islands, complete sequence
          Length = 123887

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 61    tcaaaactcaactgtatttctata 84
             |||||| |||||||||||||||||
Sbjct: 50834 tcaaaagtcaactgtatttctata 50811
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>emb|AL353710.7| Human DNA sequence from clone RP11-470P4 on chromosome 9 Contains a novel
              gene, the 5' end of the CHAC gene for chorea acanthocytosis
              and a CpG island, complete sequence
          Length = 110633

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 62     caaaactcaactgtatttctatac 85
              |||||||||| |||||||||||||
Sbjct: 109107 caaaactcaattgtatttctatac 109084
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>emb|AL096677.21|HSJ322G13 Human DNA sequence from clone RP3-322G13 on chromosome 20p11.21-12.3
             Contains the gene for NTF2-related export protein (NXT1),
             the ZNF336 gene for zinc finger protein 336, two putative
             novel genes, the NAPB gene for N-ethylmaleimide-sensitive
             factor attachment protein beta, the CSTL1 gene for
             cystatin-like 1, the CST11 gene for cystatin 11 and six
             CpG islands, complete sequence
          Length = 112180

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 42775 caaaattcaactgtatttctatac 42798
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>emb|AL049641.11|HSDA22P16 Human DNA sequence from clone RP6-22P16 on chromosome Xq11.1-13.1
             Contains a zinc finger protein 208 (ZNF208) pseudogene,
             complete sequence
          Length = 103367

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             |||||||||| |||||||||||||
Sbjct: 67212 caaaactcaattgtatttctatac 67235
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>emb|AL035665.32|HS644L1 Human DNA sequence from clone RP4-644L1 on chromosome 20q12 Contains
             the MAFB gene for v-maf musculoaponeurotic fibrosarcoma
             oncogene homolog B (avian), a novel gene and two CpG
             islands, complete sequence
          Length = 145593

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 13232 caaaaatcaactgtatttctatac 13255
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>emb|AL009181.1|HS212P9 Human DNA sequence from clone RP1-212P9 on chromosome 1p34.1-35
             Contains the OPRD1 gene for opioid receptor delta 1, two
             novel genes, the 5' end of the  EPB41 gene for erythrocyte
             membrane protein band 4.1 (elliptocytosis 1, RH-linked)
             and a CpG island, complete sequence
          Length = 148540

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 61    tcaaaactcaactgtatttctata 84
             |||||| |||||||||||||||||
Sbjct: 20058 tcaaaaatcaactgtatttctata 20081
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>gb|AC007998.10| Homo sapiens chromosome 18, clone RP11-322E11, complete sequence
          Length = 207799

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 56889 caaaaatcaactgtatttctatac 56866
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>emb|AL109946.12|HSJ820B18 Human DNA sequence from clone RP5-820B18 on chromosome Xq22.2-23
            Contains part of a novel gene for a protein similar to
            nuclear cap binding protein and the 5' end of the MID1
            gene for midline 1 (Opitz/BBB syndrome) protein, complete
            sequence
          Length = 94081

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 62   caaaactcaactgtatttctatac 85
            ||||| ||||||||||||||||||
Sbjct: 9071 caaaaatcaactgtatttctatac 9094
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>gb|AC124892.8| Homo sapiens 12 BAC RP11-574B6 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 20925

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 47   caaaaaattcttcctcaaaa 66
            ||||||||||||||||||||
Sbjct: 8262 caaaaaattcttcctcaaaa 8243
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>gb|AC120053.4| Homo sapiens chromosome 8, clone CTD-2006H14, complete sequence
          Length = 124497

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 62   caaaactcaactgtatttctatac 85
            ||||| ||||||||||||||||||
Sbjct: 5161 caaaaatcaactgtatttctatac 5184
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>gb|AC010834.19| Homo sapiens chromosome 8, clone RP11-10N23, complete sequence
          Length = 175967

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 65642 caaaaatcaactgtatttctatac 65619
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>emb|BX511134.8| Zebrafish DNA sequence from clone CH211-134C9 in linkage group 1,
             complete sequence
          Length = 188290

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    aaaaaattcttcctcaaaac 67
             ||||||||||||||||||||
Sbjct: 61397 aaaaaattcttcctcaaaac 61416
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>dbj|AK019271.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length
           enriched library, clone:2810431G11 product:glutathione
           S-transferase, alpha 4, full insert sequence
          Length = 926

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 42  tgtgtcaaaaaattcttcctcaaa 65
           |||||||| |||||||||||||||
Sbjct: 205 tgtgtcaagaaattcttcctcaaa 182
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>gb|AC008281.3| Homo sapiens BAC clone RP11-481E6 from 2, complete sequence
          Length = 131085

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 63    aaaactcaactgtatttcta 82
             ||||||||||||||||||||
Sbjct: 85055 aaaactcaactgtatttcta 85036
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>gb|AC004826.3|AC004826 Homo sapiens PAC clone RP1-309D19 from 5, complete sequence
          Length = 149172

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 40483 caaaaatcaactgtatttctatac 40506
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>gb|AC010087.3| Homo sapiens BAC clone RP11-241M13 from 2, complete sequence
          Length = 202029

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 62     caaaactcaactgtatttctatac 85
              ||||| ||||||||||||||||||
Sbjct: 131285 caaaaatcaactgtatttctatac 131308
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>gb|AC113382.2| Homo sapiens chromosome 5 clone RP11-325L7, complete sequence
          Length = 166870

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 62    caaaactcaactgtatttctatac 85
             ||||| ||||||||||||||||||
Sbjct: 55239 caaaaatcaactgtatttctatac 55216
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>gb|AF245226.1|AF245226 Homo sapiens chromosome 21 map 21q21 clone B845I12, complete sequence
          Length = 178237

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaaaaattcttcctcaaaac 67
              ||||||||||||||||||||
Sbjct: 139920 aaaaaattcttcctcaaaac 139939
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>emb|AJ234430.1|HVU234430 Hordeum vulgare partial mRNA; clone cMWG0704
          Length = 521

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   ttacgatgacacatcaccag 24
           ||||||||||||||||||||
Sbjct: 347 ttacgatgacacatcaccag 328
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
             epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
             unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
             complete cds
          Length = 185988

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   tccgcgaaaacgatggcaac 295
             ||||||||||||||||||||
Sbjct: 11813 tccgcgaaaacgatggcaac 11832
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>dbj|AP001674.1| Homo sapiens genomic DNA, chromosome 21q, section 18/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     aaaaaattcttcctcaaaac 67
              ||||||||||||||||||||
Sbjct: 276715 aaaaaattcttcctcaaaac 276734
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>dbj|AP000486.6| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-23I22, complete
              sequence
          Length = 152472

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 62     caaaactcaactgtatttctatac 85
              ||||| ||||||||||||||||||
Sbjct: 113042 caaaaatcaactgtatttctatac 113065
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>dbj|AP003467.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1205A7
          Length = 150708

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    attcttcctcaaaactcaactgta 76
             |||||||| |||||||||||||||
Sbjct: 90541 attcttccacaaaactcaactgta 90518
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>emb|AL157359.1|HSP19646 Homo sapiens chromosome 21 sequence from PAC RP4-646P19 map 21q21
            region D21S189-LA297, complete sequence
          Length = 121360

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 48   aaaaaattcttcctcaaaac 67
            ||||||||||||||||||||
Sbjct: 1095 aaaaaattcttcctcaaaac 1076
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>emb|CT571261.1| Medicago truncatula chromosome 5 clone mth2-67l4, COMPLETE SEQUENCE
          Length = 136545

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 49    aaaaattcttcctcaaaactcaac 72
             |||||||||||||| |||||||||
Sbjct: 58235 aaaaattcttcctctaaactcaac 58212
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>emb|AL669959.22| Mouse DNA sequence from clone RP23-221H6 on chromosome 4, complete
             sequence
          Length = 213801

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aattcttcctcaaaactcaa 71
             ||||||||||||||||||||
Sbjct: 23072 aattcttcctcaaaactcaa 23053
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>dbj|AP003551.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1967D12, complete
            sequence
          Length = 160952

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 53   attcttcctcaaaactcaactgta 76
            |||||||| |||||||||||||||
Sbjct: 8941 attcttccacaaaactcaactgta 8918


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,921,926
Number of Sequences: 3902068
Number of extensions: 2921926
Number of successful extensions: 58225
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58119
Number of HSP's gapped (non-prelim): 106
length of query: 338
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 316
effective length of database: 17,147,199,772
effective search space: 5418515127952
effective search space used: 5418515127952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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