ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl55h02 |
|---|---|
| Clone Library Name | barley_pub |
>ALK_MOUSE (P97793) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1621 Score = 31.2 bits (69), Expect = 0.66 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -2 Query: 336 GPLGKLIADCWA-EPQDRPSCQEILTRLLDCEYAES*EPETNLVNXSLP 193 GP+ +++ CW +P+DRP+ IL R+ C + +++N +LP Sbjct: 1360 GPVYRIMTQCWQHQPEDRPNFAIILERIEYC------TQDPDVINTALP 1402
>ALK_HUMAN (Q9UM73) ALK tyrosine kinase receptor precursor (EC 2.7.10.1)| (Anaplastic lymphoma kinase) (CD246 antigen) Length = 1620 Score = 31.2 bits (69), Expect = 0.66 Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = -2 Query: 336 GPLGKLIADCWA-EPQDRPSCQEILTRLLDCEYAES*EPETNLVNXSLP 193 GP+ +++ CW +P+DRP+ IL R+ C + +++N +LP Sbjct: 1356 GPVYRIMTQCWQHQPEDRPNFAIILERIEYC------TQDPDVINTALP 1398
>LTK_HUMAN (P29376) Leukocyte tyrosine kinase receptor precursor (EC 2.7.10.1)| (Protein tyrosine kinase 1) Length = 864 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -2 Query: 336 GPLGKLIADCWA-EPQDRPSCQEILTRLLDC 247 GP+ +++ CW EP+ RPS IL RL C Sbjct: 750 GPVYRIMTQCWQHEPELRPSFASILERLQYC 780
>HAK2_ORYSA (Q942X8) Probable potassium transporter 2 (OsHAK2)| Length = 783 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/30 (50%), Positives = 18/30 (60%) Frame = -1 Query: 202 FTPNLPVPSEVEPFLCIKLVKI*PVDPADR 113 FT NLP EV FLC+K V + V P +R Sbjct: 548 FTTNLPAFHEVLVFLCVKSVPVPYVSPDER 577
>GCY1_CAEEL (Q09435) Guanylate cyclase receptor-type gcy-1 precursor (EC| 4.6.1.2) Length = 1137 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/23 (47%), Positives = 18/23 (78%), Gaps = 1/23 (4%) Frame = -2 Query: 321 LIADCWAE-PQDRPSCQEILTRL 256 L+ DCWAE P+DRP+ + I +++ Sbjct: 801 LVKDCWAEVPEDRPTAENICSQM 823
>CLAP2_BRARE (Q6NYW6) CLIP-associating protein 2 (Cytoplasmic linker-associated| protein 2) Length = 1288 Score = 28.9 bits (63), Expect = 3.3 Identities = 15/42 (35%), Positives = 22/42 (52%) Frame = +3 Query: 159 RNGSTSEGTGRLGVXHSPGSFQALSSQRTRSRASE*GSPGSS 284 R+ + G GR+ +PGS+ +L RT+ S S GSS Sbjct: 377 RHSGQAGGAGRVTTGLTPGSYASLGRLRTKQTLSTASSVGSS 418
>M3K11_HUMAN (Q16584) Mitogen-activated protein kinase kinase kinase 11 (EC| 2.7.11.25) (Mixed lineage kinase 3) (Src-homology 3 domain-containing proline-rich kinase) Length = 847 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%) Frame = -2 Query: 333 PLGKLIADCWA-EPQDRPSCQEILTRL 256 P +L+ADCWA +P RP IL +L Sbjct: 350 PFAQLMADCWAQDPHRRPDFASILQQL 376
>ISPH_BARHE (Q6G4C5) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 343 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ + A F++ L Sbjct: 26 QIVLLALKKYGAPVYVRHEIVHNRYVVEGLQQRGAIFVEEL 66
>PTK7_HUMAN (Q13308) Tyrosine-protein kinase-like 7 precursor (Colon carcinoma| kinase 4) (CCK-4) Length = 1070 Score = 28.5 bits (62), Expect = 4.3 Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 4/35 (11%) Frame = -2 Query: 342 PEG---PLGKLIADCWA-EPQDRPSCQEILTRLLD 250 PEG L +L+ CWA P+DRPS EI + L D Sbjct: 1029 PEGCPSKLYRLMQRCWALSPKDRPSFSEIASALGD 1063
>RASA3_HUMAN (Q14644) Ras GTPase-activating protein 3 (GAP1(IP4BP)) (Ins| P4-binding protein) Length = 834 Score = 28.5 bits (62), Expect = 4.3 Identities = 32/100 (32%), Positives = 42/100 (42%) Frame = +3 Query: 21 LKGENFSFTNLKERVADIQPKYKSLIYVYPCRSAGSTG*IFTSFIQRNGSTSEGTGRLGV 200 L+ E+F N+ + IQP+ I C A I T Q N RL V Sbjct: 635 LEEESFKMKNMFQV---IQPERALYIQANNCVEAKDWIDILTKVSQCNQK------RLTV 685 Query: 201 XHSPGSFQALSSQRTRSRASE*GSPGSSADLGALPSNLQL 320 H P ++ LS RA +PG S G LP+N+QL Sbjct: 686 YH-PSAY--LSGHWLCCRAPSDSAPGCSPCTGGLPANIQL 722
>ISPH_BARQU (Q6G0C9) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 340 Score = 28.5 bits (62), Expect = 4.3 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ + A F++ L Sbjct: 26 QIVLLALKKYGAPVYVRHEIVHNRYVVEGLQQRGAIFVEEL 66
>ISPH_BRUSU (Q8G257) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 346 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ + A F++ L Sbjct: 27 QIVVLALKKYGAPVYVRHEIVHNRYVVEGLQARGAIFVEEL 67
>ISPH_BRUME (Q8YFR1) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 346 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ + A F++ L Sbjct: 27 QIVVLALKKYGAPVYVRHEIVHNRYVVEGLQARGAIFVEEL 67
>ISPH_BRUAB (Q57EP6) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 346 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ + A F++ L Sbjct: 27 QIVVLALKKYGAPVYVRHEIVHNRYVVEGLQARGAIFVEEL 67
>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) Length = 518 Score = 28.1 bits (61), Expect = 5.6 Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 5/33 (15%) Frame = -2 Query: 342 PEGP----LGKLIADCWA-EPQDRPSCQEILTR 259 PE P L +L+ CW+ EP+DRPS QE L + Sbjct: 250 PETPGLEGLKELMQLCWSSEPKDRPSFQECLPK 282
>MOS_XENLA (P12965) Serine/threonine-protein kinase mos (EC 2.7.11.1)| (pp39-mos) Length = 359 Score = 28.1 bits (61), Expect = 5.6 Identities = 10/23 (43%), Positives = 17/23 (73%), Gaps = 1/23 (4%) Frame = -2 Query: 321 LIADCWA-EPQDRPSCQEILTRL 256 ++ CWA PQ+RP+ +++L RL Sbjct: 309 IVQSCWAARPQERPNAEQLLERL 331
>ISPH_RHILO (Q985W3) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC| 1.17.1.2) Length = 336 Score = 28.1 bits (61), Expect = 5.6 Identities = 15/41 (36%), Positives = 24/41 (58%) Frame = +1 Query: 31 RIFPLQI*KKGSPIYSRNTRV*YMYILAGLQDQRARFLQVL 153 +I L + K G+P+Y R+ V Y++ GLQ A F++ L Sbjct: 29 QIVVLALKKYGAPVYVRHEIVHNRYVVEGLQSLGAVFIEEL 69
>IF3_BORGA (Q662H4) Translation initiation factor IF-3| Length = 186 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 56 RKGRRYTAEIQEFNICISLPVCRINGLDFYKFYTEKR 166 +K + ++ E + +S PVC+I YKF+ EKR Sbjct: 50 KKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKR 86
>IF3_BORBU (O51208) Translation initiation factor IF-3| Length = 186 Score = 27.7 bits (60), Expect = 7.3 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 56 RKGRRYTAEIQEFNICISLPVCRINGLDFYKFYTEKR 166 +K + ++ E + +S PVC+I YKF+ EKR Sbjct: 50 KKAKEAGLDLVEVSPNVSPPVCKIIDYGKYKFHQEKR 86
>A2MG_PONPY (Q5R4N8) Alpha-2-macroglobulin precursor (Alpha-2-M)| Length = 1474 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +1 Query: 61 GSPIYSRNTRV*YMYILAGLQDQRARFLQVLYRETV 168 GS +Y++ Y + LAG QD+R LQ L+ E V Sbjct: 1141 GSHVYTKALLA-YAFALAGNQDKRKEVLQSLHEEAV 1175
>HAK10_ORYSA (Q67VS5) Potassium transporter 10 (OsHAK10)| Length = 843 Score = 27.7 bits (60), Expect = 7.3 Identities = 15/30 (50%), Positives = 17/30 (56%) Frame = -1 Query: 202 FTPNLPVPSEVEPFLCIKLVKI*PVDPADR 113 F NLP +V FLCIK V I V P +R Sbjct: 583 FVTNLPAFHQVLIFLCIKNVPIPHVSPEER 612
>POT8_ARATH (Q9M7J9) Potassium transporter 8 (AtPOT8) (AtHAK8)| Length = 781 Score = 27.3 bits (59), Expect = 9.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 202 FTPNLPVPSEVEPFLCIKLVKI*PVDPADR 113 F NLP +V FLC+K V + V P +R Sbjct: 555 FITNLPAFHQVVVFLCVKSVPVPHVKPEER 584
>CO4A1_HUMAN (P02462) Collagen alpha-1(IV) chain precursor| Length = 1669 Score = 27.3 bits (59), Expect = 9.5 Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%) Frame = +3 Query: 3 PCNILLLKGENF----SFTNLKERVADIQPKYKSLIYVYPCRSAGSTG*IFTSFIQRNGS 170 P ++ + GEN S + E A + + I + PC S S+ I SF+ + Sbjct: 1530 PMSMAPITGENIRPFISRCAVCEAPAMVMAVHSQTIQIPPCPSGWSSLWIGYSFVMHTSA 1589 Query: 171 TSEGTGRLGVXHSPGS 218 +EG+G+ SPGS Sbjct: 1590 GAEGSGQ--ALASPGS 1603
>PERI_MOUSE (P15331) Peripherin| Length = 475 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +3 Query: 207 SPGSFQALSSQR-TRSRASE*GSPGSSADLGA 299 SPG+F SS R + SR GSP SSA LG+ Sbjct: 35 SPGAFSYSSSSRFSSSRLLGSGSPSSSARLGS 66
>PERI_RAT (P21807) Peripherin| Length = 468 Score = 27.3 bits (59), Expect = 9.5 Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 1/32 (3%) Frame = +3 Query: 207 SPGSFQALSSQR-TRSRASE*GSPGSSADLGA 299 SPG+F SS R + SR GSP SSA LG+ Sbjct: 28 SPGAFSYSSSSRFSSSRLLGSGSPSSSARLGS 59 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,695,572 Number of Sequences: 219361 Number of extensions: 954629 Number of successful extensions: 2291 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2255 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2290 length of database: 80,573,946 effective HSP length: 92 effective length of database: 60,392,734 effective search space used: 1449425616 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
