ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl55h01 |
|---|---|
| Clone Library Name | barley_pub |
>YQG4_CAEEL (Q09499) Putative serine/threonine-protein kinase C41C4.4 precursor| (EC 2.7.11.1) Length = 983 Score = 68.2 bits (165), Expect = 5e-12 Identities = 30/58 (51%), Positives = 42/58 (72%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RNK HYRE P D+++SLG +P+ F YF+SRFP+LL+ VYK + YC E F++Y+ Sbjct: 867 RNKKHHYRELPEDVRQSLGDIPDQFLHYFTSRFPRLLLHVYKA-TEYCSGEAVFKRYY 923
>ERN1_MOUSE (Q9EQY0) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Inositol-requiring protein 1) (IRE1a) (Ire1-alpha) (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonucle Length = 977 Score = 64.3 bits (155), Expect = 7e-11 Identities = 29/58 (50%), Positives = 41/58 (70%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RNK HYRE P +++E+LGS+P+ F RYF+SRFP LL Y+ M + C+ E F+ Y+ Sbjct: 905 RNKKHHYRELPVEVQETLGSIPDDFVRYFTSRFPHLLSHTYQAMEL-CRHERLFQTYY 961
>ERN1_HUMAN (O75460) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Inositol-requiring protein 1) (hIRE1p) (IRE1a) (Ire1-alpha) (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endo Length = 977 Score = 61.2 bits (147), Expect = 6e-10 Identities = 28/58 (48%), Positives = 39/58 (67%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RNK HYRE P +++E+LG+LP+ F YF+SRFP LL Y+ M + C E F+ Y+ Sbjct: 905 RNKKHHYRELPAEVRETLGTLPDDFVCYFTSRFPHLLAHTYRAMEL-CSHERLFQPYY 961
>ERN2_HUMAN (Q76MJ5) Serine/threonine-protein kinase/endoribonuclease IRE2| precursor (Inositol-requiring protein 2) (hIRE2p) (IRE1b) (Ire1-beta) (Endoplasmic reticulum-to-nucleus signaling 2) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endor Length = 925 Score = 60.5 bits (145), Expect = 9e-10 Identities = 26/58 (44%), Positives = 41/58 (70%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RNK HYRE P +++++LG +P+GF +YF++RFP+LL+ ++VM C E F Y+ Sbjct: 853 RNKKHHYRELPVEVRQALGQVPDGFVQYFTNRFPQLLLHTHRVMR-SCASESLFLPYY 909
>ERN2_MOUSE (Q9Z2E3) Serine/threonine-protein kinase/endoribonuclease IRE2| precursor (Inositol-requiring protein 2) (IRE1b) (Ire1-beta) (Endoplasmic reticulum-to-nucleus signaling 2) (mIre1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endori Length = 911 Score = 59.7 bits (143), Expect = 2e-09 Identities = 26/58 (44%), Positives = 38/58 (65%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RNK HYRE P +++++LG LP GF +YF+ RFP+LL+ ++ M C E F Y+ Sbjct: 841 RNKKHHYRELPAEVRQTLGQLPAGFIQYFTQRFPRLLLHTHRAMRT-CASESLFLPYY 897
>IRE1_YEAST (P32361) Serine/threonine-protein kinase/endoribonuclease IRE1| precursor (Endoplasmic reticulum-to-nucleus signaling 1) [Includes: Serine/threonine-protein kinase (EC 2.7.11.1); Endoribonuclease (EC 3.1.26.-)] Length = 1115 Score = 53.9 bits (128), Expect = 9e-08 Identities = 23/57 (40%), Positives = 36/57 (63%) Frame = -2 Query: 406 RNKSGHYREPPTDLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKY 236 RNK H+ + P D+ E +G +P+GF YF+ RFP LLI VY ++ D++ R++ Sbjct: 1056 RNKYHHFMDLPEDIAELMGPVPDGFYDYFTKRFPNLLIGVYMIVKENLSDDQILREF 1112
>FAM5C_RAT (Q8K1M7) Protein FAM5C precursor (BMP/retinoic acid-inducible| neural-specific protein 3) Length = 766 Score = 30.4 bits (67), Expect = 1.0 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +3 Query: 105 SLMISSFNGNMIQITCTYILLGEGC*CIQ*RDDICFSYTELPMKYFLKSSSSLQ*TDMTL 284 S+ I + N+++IT T+ + D+ F LPM YFL +S T M L Sbjct: 293 SMDIQAMEENLLRITETWKAYNSD---FEDSDEFKFFMKRLPMNYFLNTS-----TIMHL 344 Query: 285 YTSISSFGNRLEKYRSN 335 +T S+F R E+ ++ Sbjct: 345 WTMDSNFQRRYEQLENS 361
>FAM5C_MOUSE (Q499E0) Protein FAM5C precursor| Length = 766 Score = 30.4 bits (67), Expect = 1.0 Identities = 23/77 (29%), Positives = 37/77 (48%) Frame = +3 Query: 105 SLMISSFNGNMIQITCTYILLGEGC*CIQ*RDDICFSYTELPMKYFLKSSSSLQ*TDMTL 284 S+ I + N+++IT T+ + D+ F LPM YFL +S T M L Sbjct: 293 SMDIQAMEENLLRITETWKAYNSD---FEDSDEFKFFMKRLPMNYFLNTS-----TIMHL 344 Query: 285 YTSISSFGNRLEKYRSN 335 +T S+F R E+ ++ Sbjct: 345 WTMDSNFQRRYEQLENS 361
>RN5A_MOUSE (Q05921) 2-5A-dependent ribonuclease (EC 3.1.26.-) (2-5A-dependent| RNase) (Ribonuclease L) (RNase L) (Ribonuclease 4) Length = 735 Score = 30.0 bits (66), Expect = 1.4 Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -2 Query: 406 RNKSGHYREPPT-DLKESLGSLPEGFDRYFSSRFPKLLIEVYKVMSVYCKDEEDFRKYF 233 RN H E +KE LG RYF FP L+I +YK + E ++RK+F Sbjct: 666 RNIGEHINEEKKRGMKEILGDP----SRYFQETFPDLVIYIYKKLK-----ETEYRKHF 715
>STAC_MOUSE (P97306) SH3 and cysteine-rich domain-containing protein (SRC| homology 3 and cysteine-rich domain protein) Length = 403 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -2 Query: 355 LGSLPEGFDRYFSSRFPKLLIE----VYKVMSVYCKDEED 248 +G LP+GF RY+SS P L+ E + +VM + C ++ D Sbjct: 161 MGKLPKGFRRYYSS--PLLIHEQFGCIKEVMPIACGNKVD 198
>STAC_HUMAN (Q99469) SH3 and cysteine-rich domain-containing protein (SRC| homology 3 and cysteine-rich domain protein) Length = 402 Score = 28.5 bits (62), Expect = 4.0 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 4/40 (10%) Frame = -2 Query: 355 LGSLPEGFDRYFSSRFPKLLIE----VYKVMSVYCKDEED 248 +G LP+GF RY+SS P L+ E + +VM + C ++ D Sbjct: 160 MGKLPKGFRRYYSS--PLLIHEQFGCIKEVMPIACGNKVD 197
>TRPA_LEPBI (Q5MI53) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 266 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 7/72 (9%) Frame = -1 Query: 227 ELGITKADVI---PLLYALTAFT*QNVCTCD-LYHITIEGRNHKRSQPLICTLYYTELYC 60 ELGI +D + P++ A + +N + D ++ +T + HK+ PL+ Y+ +Y Sbjct: 47 ELGIPFSDPVADGPVIQRAVARSLKNKFSFDEIFRVTKQIHLHKQETPLVYLTYFNPIYH 106 Query: 59 YSVT---DKKKD 33 +T D KD Sbjct: 107 CGITKFLDNAKD 118
>COAT3_MIMIV (Q5UQN7) Probable capsid protein 3| Length = 2156 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Frame = -2 Query: 385 REPPTDLKESLGSLPEGFDRYFSSRFPKLLIEV-YKVMSVYCKDEEDFRKYFIGSSV 218 RE T+LK + L +GF YF +++ K+ E Y + +E + G+S+ Sbjct: 587 RETLTELKSTAKQLYQGFYNYFMNKYNKMHFEAEYHCEEINPLVQEYVNHFLTGTSI 643 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,754,728 Number of Sequences: 219361 Number of extensions: 1102729 Number of successful extensions: 2222 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2193 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2222 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
