Clone Name | rbastl55g09 |
---|---|
Clone Library Name | barley_pub |
>emb|BX248137.9| Zebrafish DNA sequence from clone DKEY-19L19, complete sequence Length = 209896 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 59 cattacattcattttacaacaaatgt 84 |||| ||||||||||||||||||||| Sbjct: 176545 catttcattcattttacaacaaatgt 176520
>emb|CR940310.6| M.truncatula DNA sequence from clone MTH2-5D8 on chromosome 3, complete sequence Length = 121689 Score = 42.1 bits (21), Expect = 0.66 Identities = 24/25 (96%) Strand = Plus / Minus Query: 114 gaaaaacacatacatgattctacag 138 ||||||||||| ||||||||||||| Sbjct: 37638 gaaaaacacattcatgattctacag 37614
>emb|CR382370.13| Zebrafish DNA sequence from clone DKEY-22O12 in linkage group 1, complete sequence Length = 257504 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 229746 ttacagtacagcattacatt 229765
>emb|CR388412.9| Zebrafish DNA sequence from clone CH211-69G13 in linkage group 5, complete sequence Length = 158289 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 45457 ttacagtacagcattacatt 45438
>gb|AC108799.9| Mus musculus, clone RP23-119G12, complete sequence Length = 228349 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 153 tgccttttttagcatcaacaaaaa 176 ||||||| |||||||||||||||| Sbjct: 88931 tgcctttgttagcatcaacaaaaa 88908
>emb|BX908783.8| Zebrafish DNA sequence from clone DKEY-86M2 in linkage group 25, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 121961 ttacagtacagcattacatt 121980
>emb|BX323796.14| Zebrafish DNA sequence from clone DKEY-106N21 in linkage group 25, complete sequence Length = 204383 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 123959 ttacagtacagcattacatt 123940
>emb|BX649627.10| Zebrafish DNA sequence from clone DKEY-78B7 in linkage group 3, complete sequence Length = 92147 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 80765 ttacagtacagcattacatt 80746
>emb|AJ291569.1|HTR291569 Homalia trichomanoides mitochondrial partial nad5 gene for NADH dehydrogenase subunit 5, exons 1-2 Length = 1933 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 tttgccttttttagcatcaacaaa 174 |||| ||||||||||||||||||| Sbjct: 1825 tttgacttttttagcatcaacaaa 1848
>emb|BX511176.6| Zebrafish DNA sequence from clone CH211-8C17 in linkage group 3, complete sequence Length = 116813 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 103428 ttacagtacagcattacatt 103409
>emb|CR556722.7| Zebrafish DNA sequence from clone CH211-195N12 in linkage group 13, complete sequence Length = 205873 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 caatgcatttgcctttttta 163 |||||||||||||||||||| Sbjct: 163844 caatgcatttgcctttttta 163863
>emb|BX000435.21| Zebrafish DNA sequence from clone DKEY-12L8 in linkage group 1, complete sequence Length = 201673 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 153044 ttacagtacagcattacatt 153025
>emb|AL935031.12| Zebrafish DNA sequence from clone CH211-93I23, complete sequence Length = 178457 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 caatgcatttgcctttttta 163 |||||||||||||||||||| Sbjct: 27275 caatgcatttgcctttttta 27294
>emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 in linkage group 14, complete sequence Length = 214178 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 145384 ttacagtacagcattacatt 145403
>gb|AC092645.2| Homo sapiens BAC clone RP11-399B17 from 2, complete sequence Length = 147390 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 ttttttagcatcaacaaaaatcat 180 |||||||||||| ||||||||||| Sbjct: 114908 ttttttagcatctacaaaaatcat 114931
>gb|AC008394.3|AC008394 Homo sapiens chromosome 5 clone CTC_242N15, complete sequence Length = 171545 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 ttctacagctgcacaatgcatttg 154 |||||||||||||||||| ||||| Sbjct: 157682 ttctacagctgcacaatgtatttg 157659
>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome Length = 3940880 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 60 attacattcattttacaacaaatg 83 |||||||||||||||||| ||||| Sbjct: 381838 attacattcattttacaagaaatg 381861
>emb|BX842613.7| Zebrafish DNA sequence from clone CH211-227J9 in linkage group 19, complete sequence Length = 166128 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 90961 ttacagtacagcattacatt 90942
>emb|BX004885.4| Zebrafish DNA sequence from clone CH211-103L6, complete sequence Length = 187201 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 39594 ttacagtacagcattacatt 39613
>dbj|AP002496.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2378D21, complete sequence Length = 110702 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tagcatcaacaaaaatcatg 181 |||||||||||||||||||| Sbjct: 77051 tagcatcaacaaaaatcatg 77032
>emb|AL953893.17| Zebrafish DNA sequence from clone DKEY-60B12, complete sequence Length = 216749 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 164 gcatcaacaaaaatcatgtg 183 |||||||||||||||||||| Sbjct: 55852 gcatcaacaaaaatcatgtg 55833
>emb|CR762424.33| Zebrafish DNA sequence from clone RP71-52E8 in linkage group 22, complete sequence Length = 178229 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ttacagtacagcattacatt 67 |||||||||||||||||||| Sbjct: 16976 ttacagtacagcattacatt 16995 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,008,835 Number of Sequences: 3902068 Number of extensions: 2008835 Number of successful extensions: 151007 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 150892 Number of HSP's gapped (non-prelim): 115 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)