>Y1629_HAEIN (P45280) Hypothetical protein HI1629|
          Length = 212

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = -1

Query: 204 FSQFGCTGLFFFRQMHGLPSMPFSLV*GDVRRVTVCRYGWVDFCSGSCTI 55
           FSQ+G   LF  R + GL + P  +V G  RRV+  R+  +DFC+   ++
Sbjct: 119 FSQYGNRVLFVARFLPGLRA-PIYMVSGITRRVSYVRFVLIDFCAAIISV 167

>NU4M_APILI (P34853) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 447

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 21/82 (25%), Positives = 43/82 (52%)
 Frame = -3

Query: 268 VDWFMPFRTWLSGLIISLRVVLLTVWLHGLVFFPADAWLALNAIFLGMRRRPTCNCLQIW 89
           +DW   F   LS  + S  +++LT+W+ GL+F   +   +LN +F+ +    +   + + 
Sbjct: 54  IDWIYIFCN-LSFNMYSYGLIMLTLWIFGLIFISLNN-NSLNCLFMNLLLMISLLLVFLS 111

Query: 88  MG*FLQWLMYYCGHRYIIVVFF 23
           M   L +L Y  G   ++++F+
Sbjct: 112 MNLLLFYLFYEFG---LLLIFY 130

>MICA2_HUMAN (O94851) Protein MICAL-2|
          Length = 1124

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 26/80 (32%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
 Frame = +2

Query: 20  SKEYNNNVSVSTIVHEPLQK----STHPYLQTVTRRTSPHTKENGIEGKPCICRKKNKPV 187
           SKE  N   V ++ ++ L K    + +P L    RR S      GI GKP +C     PV
Sbjct: 706 SKEGGNQNKVKSMANQLLAKFEESTRNPSLMKQERRVS------GI-GKPVLCSSSGPPV 758

Query: 188 QPNCEKDYSQTDDQT*QPSP 247
              C K     ++ T  PSP
Sbjct: 759 HSCCPK----PEEATPSPSP 774

>Y3474_PSEAE (O68826) Hypothetical membrane protein PA3474|
          Length = 286

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 241 WLSGLIISLRVVLLTVWLHGLVFFPADAWLALNAIFLG 128
           +L+G + S   VL  V L GLVF P   W  +   F+G
Sbjct: 21  YLAGQVDSYFAVLTRVLLAGLVFLPLTRWRGVEPRFVG 58

>TAGH_ENTFA (Q831L8) Teichoic acids export ATP-binding protein tagH (EC|
           3.6.3.40)
          Length = 447

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
 Frame = +3

Query: 12  TISVKNTTIMYLCPQ*YMSHCKNQPIHICKQ-LH----VGRLLIPRKMALRASHASAGKK 176
           T+  K+  I+ LC   Y+S    + I +    +H    + R+ +P K+A + ++A    K
Sbjct: 306 TLGTKSLLILLLCMIFYVSLTFVKGISLTTAFIHPAETIQRIFVPEKVAGKDTNAVKTTK 365

Query: 177 TSPCSQTVRRTTRKLMIKPDNQVRNGMNQ 263
           T P S    R   ++   P N   N  ++
Sbjct: 366 TKPASTKESRQQEEVQPSPTNVPENNNSE 394

>CORO_YEAST (Q06440) Coronin-like protein|
          Length = 651

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 18/63 (28%), Positives = 26/63 (41%)
 Frame = +2

Query: 89  PYLQTVTRRTSPHTKENGIEGKPCICRKKNKPVQPNCEKDYSQTDDQT*QPSPKWHEPVN 268
           P      R   P T+E  +E          K  QP  EK  S+++ +  Q +PK   P+ 
Sbjct: 409 PSFHEAKRPQQPTTQETALE---------EKKEQPKVEKPISESEKEVKQEAPKSPSPLK 459

Query: 269 SPS 277
           S S
Sbjct: 460 SAS 462

>PVRL2_HUMAN (Q92692) Poliovirus receptor-related protein 2 precursor (Herpes|
           virus entry mediator B) (HveB) (Nectin-2) (CD112
           antigen)
          Length = 538

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +1

Query: 76  KINPSISANSYTSDVSSYQGK 138
           KINP   A SY+S   SYQGK
Sbjct: 508 KINPIYDALSYSSPSDSYQGK 528


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,118,278
Number of Sequences: 219361
Number of extensions: 873877
Number of successful extensions: 2552
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2552
length of database: 80,573,946
effective HSP length: 70
effective length of database: 65,218,676
effective search space used: 1565248224
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)