ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55f04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
2dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
3dbj|AK106519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
4dbj|AK101990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.006
5gb|AC067773.4| Homo sapiens chromosome 8, clone RP11-706J10, com... 46 0.096
6gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I... 46 0.096
7gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete ... 44 0.38
8gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence 42 1.5
9gb|AC149302.1| Solanum demissum chromosome 11 clone PGEC400L14 m... 42 1.5
10gb|AC091655.15| Trypanosoma brucei chromosome 5 clone RPCI93-3C6... 42 1.5
11emb|AL627162.4| Zebrafish DNA sequence from clone XX-KT119 in li... 42 1.5
12emb|AL133454.6|CNS01DV5 Human chromosome 14 DNA sequence BAC R-5... 42 1.5
13emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 i... 42 1.5
14gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 ma... 42 1.5
15emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 i... 42 1.5
16emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chro... 42 1.5
17emb|AL929252.6| Zebrafish DNA sequence from clone CH211-150G13 i... 42 1.5
18emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from... 42 1.5
19gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, co... 40 5.9
20gb|AC115738.9| Mus musculus chromosome 3, clone RP23-474P24, com... 40 5.9
21gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosom... 40 5.9
22emb|Z77136.1|CEZC376 Caenorhabditis elegans Cosmid ZC376, comple... 40 5.9
23gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complet... 40 5.9
24ref|XM_759648.1| Theileria parva strain Muguga importin beta-rel... 40 5.9
25gb|AC101679.8| Mus musculus chromosome 17, clone RP23-173O19, co... 40 5.9
26gb|AC160124.3| Mus musculus BAC clone RP23-297P22 from chromosom... 40 5.9
27emb|AL513130.11| Human DNA sequence from clone RP11-572D5 on chr... 40 5.9
28gb|AC131310.3| Homo sapiens chromosome 15, clone RP11-150C6, com... 40 5.9
29gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, comp... 40 5.9
30gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome... 40 5.9
31dbj|AK150031.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 5.9
32gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, comp... 40 5.9
33gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence 40 5.9
34gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Can... 40 5.9
35emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in ... 40 5.9
36ref|NM_074107.2| Caenorhabditis elegans ZC376.3 (carboxylesteras... 40 5.9
37gb|AC011224.8|AC011224 Homo sapiens, clone RP11-10K20, complete ... 40 5.9
38gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
39gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complet... 40 5.9
40gb|AC127511.7| Homo sapiens chromosome 15, clone RP13-188P24, co... 40 5.9
41dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
42emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chro... 40 5.9
43dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44gb|U58728.1| Caenorhabditis elegans cosmid C54H2, complete sequence 40 5.9
45gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, comple... 40 5.9
46emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chro... 40 5.9 
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 411     tacttctttgaaccacgagctgctgcaag 439
               ||||| |||||||||||||||||||||||
Sbjct: 7337763 tacttttttgaaccacgagctgctgcaag 7337735



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 356      agcctgacatttctgttcttgtcaaaat 383
                ||||||||||| ||||||| ||||||||
Sbjct: 38965931 agcctgacattactgttctagtcaaaat 38965904
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>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0431F01
          Length = 143209

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 411    tacttctttgaaccacgagctgctgcaag 439
              ||||| |||||||||||||||||||||||
Sbjct: 139193 tacttttttgaaccacgagctgctgcaag 139165
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>dbj|AK106519.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-C06, full
            insert sequence
          Length = 2644

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 411  tacttctttgaaccacgagctgctgcaag 439
            ||||| |||||||||||||||||||||||
Sbjct: 2164 tacttttttgaaccacgagctgctgcaag 2136
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>dbj|AK101990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033079D23, full
            insert sequence
          Length = 2651

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 411  tacttctttgaaccacgagctgctgcaag 439
            ||||| |||||||||||||||||||||||
Sbjct: 2234 tacttttttgaaccacgagctgctgcaag 2206
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>gb|AC067773.4| Homo sapiens chromosome 8, clone RP11-706J10, complete sequence
          Length = 174397

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 5      ttctaacatgagacctttttaaaatta 31
              |||||| ||||||||||||||||||||
Sbjct: 106439 ttctaaaatgagacctttttaaaatta 106413
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>gb|AC013509.5|AC013509 Homo sapiens chromosome , clone RP11-115I9, complete sequence
          Length = 151544

 Score = 46.1 bits (23), Expect = 0.096
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 5      ttctaacatgagacctttttaaaatta 31
              |||||| ||||||||||||||||||||
Sbjct: 100621 ttctaaaatgagacctttttaaaatta 100647
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>gb|AC146891.3| Dasypus novemcinctus clone VMRC5-364E4, complete sequence
          Length = 133673

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 181   atttatttttaacttaaaccag 202
             ||||||||||||||||||||||
Sbjct: 48696 atttatttttaacttaaaccag 48675
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>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 216    acacaatacaacacaataccccatc 240
              |||||| ||||||||||||||||||
Sbjct: 765915 acacaacacaacacaataccccatc 765891
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>gb|AC149302.1| Solanum demissum chromosome 11 clone PGEC400L14 map MAP_LOC, complete
             sequence
          Length = 136874

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 384   tctgaacatgacattcttttt 404
             |||||||||||||||||||||
Sbjct: 50754 tctgaacatgacattcttttt 50774
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>gb|AC091655.15| Trypanosoma brucei chromosome 5 clone RPCI93-3C6, complete sequence
          Length = 158247

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 216   acacaatacaacacaataccccatc 240
             |||||| ||||||||||||||||||
Sbjct: 95521 acacaacacaacacaataccccatc 95497
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>emb|AL627162.4| Zebrafish DNA sequence from clone XX-KT119 in linkage group 7 Contains
             part of a gene similar to GAS2 (growth arrest-specific 2)
             a CpG island, complete sequence
          Length = 29255

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 379   aaaattctgaacatgacattctttt 403
             |||||||||||||| ||||||||||
Sbjct: 12583 aaaattctgaacataacattctttt 12559
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>emb|AL133454.6|CNS01DV5 Human chromosome 14 DNA sequence BAC R-580E16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 165159

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 50     atcaaaagaacaaaaatgtat 70
              |||||||||||||||||||||
Sbjct: 118030 atcaaaagaacaaaaatgtat 118050
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>emb|BX649405.13| Zebrafish DNA sequence from clone DKEY-190M16 in linkage group 1,
             complete sequence
          Length = 231915

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tgaatatacaatgtctgactc 128
             |||||||||||||||||||||
Sbjct: 23418 tgaatatacaatgtctgactc 23398
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>gb|AC174474.1| Pan troglodytes chromosome X clone CH251-58H10 map human ortholog p11.4,
              complete sequence
          Length = 159881

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 181    atttatttttaacttaaacca 201
              |||||||||||||||||||||
Sbjct: 131739 atttatttttaacttaaacca 131759
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>emb|AL928650.5| Zebrafish DNA sequence from clone CH211-160D14 in linkage group 17,
             complete sequence
          Length = 178563

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   tgaatatacaatgtctgactc 128
             |||||||||||||||||||||
Sbjct: 73611 tgaatatacaatgtctgactc 73591
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>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete
             sequence
          Length = 200375

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   gaagcatgccaaacaaaccag 296
             |||||||||||||||||||||
Sbjct: 55651 gaagcatgccaaacaaaccag 55671
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>emb|AL929252.6| Zebrafish DNA sequence from clone CH211-150G13 in linkage group 7,
             complete sequence
          Length = 173244

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 379   aaaattctgaacatgacattctttt 403
             |||||||||||||| ||||||||||
Sbjct: 47942 aaaattctgaacataacattctttt 47966
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>emb|AL121578.1|HSXKSRPXR Homo sapiens chromosome X sequence from 12 cosmids, map Xp21.1 region
              DXS709-SRPX, complete sequence
          Length = 337101

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 181    atttatttttaacttaaacca 201
              |||||||||||||||||||||
Sbjct: 282676 atttatttttaacttaaacca 282696
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>gb|AC158156.10| Mus musculus chromosome 3, clone RP23-145F12, complete sequence
          Length = 201984

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  caatttatttttaacttaaa 198
            ||||||||||||||||||||
Sbjct: 7642 caatttatttttaacttaaa 7661
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>gb|AC115738.9| Mus musculus chromosome 3, clone RP23-474P24, complete sequence
          Length = 188507

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    caatttatttttaacttaaa 198
              ||||||||||||||||||||
Sbjct: 139130 caatttatttttaacttaaa 139149
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>gb|AC132426.3| Mus musculus BAC clone RP23-312J19 from chromosome 2, complete sequence
          Length = 189633

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ctcacaatttatttttaact 194
              ||||||||||||||||||||
Sbjct: 175898 ctcacaatttatttttaact 175879
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>emb|Z77136.1|CEZC376 Caenorhabditis elegans Cosmid ZC376, complete sequence
          Length = 28762

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 48  ccatcaaaagaacaaaaatg 67
           ||||||||||||||||||||
Sbjct: 250 ccatcaaaagaacaaaaatg 231
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>gb|AC123872.4| Mus musculus BAC clone RP23-254P8 from 2, complete sequence
          Length = 185953

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    ctcacaatttatttttaact 194
              ||||||||||||||||||||
Sbjct: 152961 ctcacaatttatttttaact 152980
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>ref|XM_759648.1| Theileria parva strain Muguga importin beta-related nuclear transport
            factor (TP02_0177) partial mRNA
          Length = 3204

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 14   gagacctttttaaaattaacaaac 37
            ||||||||||||||| ||||||||
Sbjct: 1888 gagacctttttaaaaataacaaac 1911
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>gb|AC101679.8| Mus musculus chromosome 17, clone RP23-173O19, complete sequence
          Length = 132957

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   cacaatacaacacaataccc 236
             ||||||||||||||||||||
Sbjct: 34398 cacaatacaacacaataccc 34379
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>gb|AC160124.3| Mus musculus BAC clone RP23-297P22 from chromosome 9, complete sequence
          Length = 182831

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    taaatacacaatacaacacaatac 234
              |||||||||||||||| |||||||
Sbjct: 131094 taaatacacaatacaaaacaatac 131117
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>emb|AL513130.11| Human DNA sequence from clone RP11-572D5 on chromosome 1 Contains part
             of the RYR2 gene for ryanodine receptor 2 (cardiac),
             complete sequence
          Length = 19799

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 178   acaatttatttttaacttaa 197
             ||||||||||||||||||||
Sbjct: 13691 acaatttatttttaacttaa 13672
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>gb|AC131310.3| Homo sapiens chromosome 15, clone RP11-150C6, complete sequence
          Length = 168425

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 175    ctcacaatttatttttaacttaaa 198
              |||||||||| |||||||||||||
Sbjct: 100385 ctcacaatttctttttaacttaaa 100362
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>gb|AC010635.6| Homo sapiens chromosome 5 clone CTD-2324F15, complete sequence
          Length = 81252

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 75    aaagtaacaaaagataaaat 94
             ||||||||||||||||||||
Sbjct: 62133 aaagtaacaaaagataaaat 62114
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>gb|AC159886.2| Mus musculus BAC clone RP24-397P9 from chromosome 9, complete sequence
          Length = 191328

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 211    taaatacacaatacaacacaatac 234
              |||||||||||||||| |||||||
Sbjct: 182197 taaatacacaatacaaaacaatac 182174
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>dbj|AK150031.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:G530122K13 product:unclassifiable, full
            insert sequence
          Length = 3240

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 182  tttatttttaacttaaaccagccttctt 209
            |||||||||||||||||  |||||||||
Sbjct: 2899 tttatttttaacttaaaaaagccttctt 2926
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>gb|AC090812.5| Homo sapiens chromosome 18, clone RP11-59J7, complete sequence
          Length = 176873

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   atttatttttaacttaaacc 200
             ||||||||||||||||||||
Sbjct: 52629 atttatttttaacttaaacc 52610
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>gb|AC015617.8| Homo sapiens, clone RP11-45H23, complete sequence
          Length = 160541

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 181  atttatttttaacttaaacc 200
            ||||||||||||||||||||
Sbjct: 3186 atttatttttaacttaaacc 3205
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>gb|AC024909.28| Homo sapiens 12 BAC RP11-823E8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 179151

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 17    acctttttaaaattaacaaa 36
             ||||||||||||||||||||
Sbjct: 57762 acctttttaaaattaacaaa 57743
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>emb|BX548256.7| Zebrafish DNA sequence from clone DKEYP-75B4 in linkage group 1,
             complete sequence
          Length = 181272

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 210   ctaaatacacaatacaacacaata 233
             ||||||| ||||||||||||||||
Sbjct: 92884 ctaaataaacaatacaacacaata 92907
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>ref|NM_074107.2| Caenorhabditis elegans ZC376.3 (carboxylesterase) mRNA, complete cds
          Length = 2188

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   ccatcaaaagaacaaaaatg 67
            ||||||||||||||||||||
Sbjct: 1545 ccatcaaaagaacaaaaatg 1564
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>gb|AC011224.8|AC011224 Homo sapiens, clone RP11-10K20, complete sequence
          Length = 164916

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 175   ctcacaatttatttttaacttaaa 198
             |||||||||| |||||||||||||
Sbjct: 87352 ctcacaatttctttttaacttaaa 87375
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>gb|AC148676.1| Macaca mulatta Major Histocompatibility Complex BAC MMU118H05, complete
              sequence
          Length = 155090

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     tttttaaaattaacaaactt 39
              ||||||||||||||||||||
Sbjct: 119417 tttttaaaattaacaaactt 119436
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>gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complete sequence
          Length = 120590

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    tatttgaatatacaatgtct 123
              ||||||||||||||||||||
Sbjct: 100490 tatttgaatatacaatgtct 100471
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>gb|AC127511.7| Homo sapiens chromosome 15, clone RP13-188P24, complete sequence
          Length = 201949

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 175    ctcacaatttatttttaacttaaa 198
              |||||||||| |||||||||||||
Sbjct: 113937 ctcacaatttctttttaacttaaa 113960
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>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0674H09
          Length = 142955

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 356   agcctgacatttctgttcttgtcaaaat 383
             ||||||||||| ||||||| ||||||||
Sbjct: 39564 agcctgacattactgttctagtcaaaat 39537
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>emb|AL606494.4| Mouse DNA sequence from clone RP23-198B6 on chromosome 2, complete
              sequence
          Length = 196744

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 182    tttatttttaacttaaaccagccttctt 209
              |||||||||||||||||  |||||||||
Sbjct: 118351 tttatttttaacttaaaaaagccttctt 118378
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0696G06
          Length = 142571

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 356    agcctgacatttctgttcttgtcaaaat 383
              ||||||||||| ||||||| ||||||||
Sbjct: 130717 agcctgacattactgttctagtcaaaat 130690
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>gb|U58728.1| Caenorhabditis elegans cosmid C54H2, complete sequence
          Length = 36344

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    aaaagaacaaaaatgtatcc 72
             ||||||||||||||||||||
Sbjct: 18723 aaaagaacaaaaatgtatcc 18742
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>gb|AC135861.5| Mus musculus BAC clone RP23-179J18 from 6, complete sequence
          Length = 202869

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 38     tttacagttcccatcaaaagaacaaaaa 65
              |||| ||||| |||||||||||||||||
Sbjct: 145070 tttaaagttcacatcaaaagaacaaaaa 145043
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>emb|AL928811.8| Mouse DNA sequence from clone RP23-74P23 on chromosome 2, complete
              sequence
          Length = 222061

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    ctcacaatttatttttaact 194
              ||||||||||||||||||||
Sbjct: 169446 ctcacaatttatttttaact 169427


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,103,385
Number of Sequences: 3902068
Number of extensions: 6103385
Number of successful extensions: 134793
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 134600
Number of HSP's gapped (non-prelim): 193
length of query: 441
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 419
effective length of database: 17,147,199,772
effective search space: 7184676704468
effective search space used: 7184676704468
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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