>TRPC_BUCSC (Q44603) Tryptophan biosynthesis protein trpCF [Includes:|
           Indole-3-glycerol phosphate synthase (EC 4.1.1.48)
           (IGPS); N-(5'-phospho-ribosyl)anthranilate isomerase (EC
           5.3.1.24) (PRAI)]
          Length = 461

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -2

Query: 147 VDPVQVYSMNEHQVRSINLLLLSVRKYSFYLTITRIIYNL 28
           +DP Q+Y    +Q  SI LL+LS+ K + Y  + ++ Y+L
Sbjct: 120 IDPYQIYLARYYQADSI-LLMLSILKDNQYRALEKLAYSL 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,657,598
Number of Sequences: 219361
Number of extensions: 385557
Number of successful extensions: 635
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 635
length of database: 80,573,946
effective HSP length: 47
effective length of database: 70,263,979
effective search space used: 1686335496
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)