Clone Name | rbastl55d09 |
---|---|
Clone Library Name | barley_pub |
>PWP1_YEAST (P21304) Periodic tryptophan protein 1| Length = 576 Score = 29.3 bits (64), Expect = 2.6 Identities = 14/47 (29%), Positives = 24/47 (51%) Frame = -3 Query: 275 TSIVKSHHPMVYTQVRHEEYTRPFIYSCSIIHVGRLLNVSAHNPARS 135 T + +HH + H +Y R + S S H +L ++++ N ARS Sbjct: 278 TGHITTHHTDAVLSMAHNKYFRSVLASTSADHTVKLWDLNSGNAARS 324
>VAV_MOUSE (P27870) Proto-oncogene vav (p95vav)| Length = 845 Score = 28.5 bits (62), Expect = 4.5 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = -2 Query: 273 KHRQVASSDGLYSSSARRVHQTLYLLLFYYSCWSFAECFST 151 KH ++ +S+GLY + ++ + L L+ +Y S +CF + Sbjct: 716 KHIKIMTSEGLYRITEKKAFRGLLELVEFYQQNSLKDCFKS 756
>NAS31_CAEEL (Q7JLI1) Zinc metalloproteinase nas-31 precursor (EC 3.4.24.21)| (Nematode astacin 31) Length = 611 Score = 28.1 bits (61), Expect = 5.8 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 14/75 (18%) Frame = +3 Query: 33 SATTLSFKQRQ*YK--YFPKYSLGLHMINLINRVLT----------ATSW--IVC*NIQQ 170 + +T S +RQ Y+ Y+P + G + +R T W + C NI Q Sbjct: 149 TVSTASRARRQAYRDRYYPSTTWGSSVYYYYDRTATPKIVKAFEQAVAFWQNVTCINIMQ 208 Query: 171 TTNMNNRTRVNKGSG 215 ++ NR RV KG G Sbjct: 209 SSTAINRIRVFKGQG 223
>ZN267_HUMAN (Q14586) Zinc finger protein 267 (Zinc finger protein HZF2)| Length = 743 Score = 28.1 bits (61), Expect = 5.8 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -2 Query: 300 AYHRPFINDKHRQVASSDG-LYSSSARRVHQTLYLLLFYYSCWSFAECF 157 +Y FI +K+ +S+ L SS+ + HQ Y L Y C F E F Sbjct: 205 SYRNVFIGEKNYHCNNSEKTLNQSSSPKNHQENYFLEKQYKCKEFEEVF 253
>LASS1_MOUSE (P27545) LAG1 longevity assurance homolog 1 (UOG-1 protein)| Length = 350 Score = 28.1 bits (61), Expect = 5.8 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = -2 Query: 267 RQVASSDGLYSSSARRVHQTLYLLLFYYSCWSF 169 R +A L A R+ ++ + LLFY +CWS+ Sbjct: 83 RPLAKRCRLQPRDAARLPESAWKLLFYLACWSY 115
>VAV_RAT (P54100) Proto-oncogene vav (p95)| Length = 843 Score = 27.7 bits (60), Expect = 7.6 Identities = 12/41 (29%), Positives = 24/41 (58%) Frame = -2 Query: 273 KHRQVASSDGLYSSSARRVHQTLYLLLFYYSCWSFAECFST 151 KH ++ +S+GLY + ++ + L L+ +Y S +CF + Sbjct: 714 KHIKIMTSEGLYRITEKKAFRGLPELVEFYQQNSLKDCFKS 754
>CCG1_MOUSE (O70578) Voltage-dependent calcium channel gamma-1 subunit| (Dihydropyridine-sensitive L-type, skeletal muscle calcium channel gamma subunit) Length = 223 Score = 27.7 bits (60), Expect = 7.6 Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 4/63 (6%) Frame = -3 Query: 302 LLITDPL*MTSIVKSHHPMVYTQVRHEEYTRPFIYSCSIIHVGR----LLNVSAHNPARS 135 +L+ L M ++V H ++ + H T C H G V+ HN +S Sbjct: 16 ILVGGVLAMVAVVTDHWAVLSPHLEHHNET------CEAAHFGLWRICTARVAVHNKDKS 69 Query: 134 CEH 126 CEH Sbjct: 70 CEH 72 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 42,260,461 Number of Sequences: 219361 Number of extensions: 740692 Number of successful extensions: 1424 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1406 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1424 length of database: 80,573,946 effective HSP length: 80 effective length of database: 63,025,066 effective search space used: 1512601584 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)