>RK4_ODOSI (P49546) Chloroplast 50S ribosomal protein L4|
          Length = 215

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = +1

Query: 37  NSADTTSPTATTGLRSIAHSIQKSGSYL-HKGKNGHQDHQERGQISLTTATQ 189
           NS D    T +   +   + ++KSG+YL HK    HQ  Q +G IS  T ++
Sbjct: 10  NSVDINGKTLSDEYKLELNVLEKSGNYLIHKDILRHQSSQRQGTISTKTRSE 61

>LYPD3_RAT (O55162) Ly6/PLAUR domain-containing protein 3 precursor|
           (GPI-anchored metastasis-associated protein C4.4A)
          Length = 352

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 15/59 (25%)
 Frame = +1

Query: 34  SNSADTTSPT-ATTGLR---------SIAHS-----IQKSGSYLHKGKNGHQDHQERGQ 165
           S++  TT+PT ATT ++         S  H      IQ+ GS+L  G  GHQD    G+
Sbjct: 259 SSTTSTTAPTTATTTIKPTTVQASHTSSTHETEHEVIQEEGSHLSGGATGHQDRSNMGK 317

>EFTU1_SOYBN (Q43467) Elongation factor Tu, chloroplast precursor (EF-Tu)|
          Length = 479

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/67 (25%), Positives = 33/67 (49%)
 Frame = +1

Query: 28  LHSNSADTTSPTATTGLRSIAHSIQKSGSYLHKGKNGHQDHQERGQISLTTATQYAVSPM 207
           L    + TT+P  T  +R+     ++   +++ G  GH DH   G+ +LT A   A++ +
Sbjct: 53  LRRTPSSTTTPRRTFTVRAARGKFERKKPHVNIGTIGHVDH---GKTTLTAALTMALAAL 109

Query: 208 ILNLPNQ 228
             + P +
Sbjct: 110 GNSAPKK 116

>GUND_CELFI (P50400) Endoglucanase D precursor (EC 3.2.1.4)|
           (Endo-1,4-beta-glucanase) (Cellulase)
          Length = 747

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
 Frame = +1

Query: 46  DTTSPTATTGLR-------SIAHSIQKSGSYLHKGKNGHQDHQERGQISLTTATQYAVS 201
           DTT+PTA TGLR       ++  +   S      G  G++ ++    +  TTAT Y V+
Sbjct: 450 DTTAPTAPTGLRAGTPTASTVPLTWSASTDTGGSGVAGYEVYRGTTLVGTTTATSYTVT 508

>EFTU2_SOYBN (P46280) Elongation factor Tu, chloroplast precursor (EF-Tu)|
          Length = 479

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/67 (25%), Positives = 35/67 (52%)
 Frame = +1

Query: 28  LHSNSADTTSPTATTGLRSIAHSIQKSGSYLHKGKNGHQDHQERGQISLTTATQYAVSPM 207
           LH  +A+TT+   +  +R+     ++   +++ G  GH DH   G+ +LT A   A++ +
Sbjct: 53  LHLAAANTTTRRRSFTVRAARGKFERKKPHVNIGTIGHVDH---GKTTLTAALTMALASL 109

Query: 208 ILNLPNQ 228
             + P +
Sbjct: 110 GNSAPKK 116

>PANK4_RAT (Q923S8) Pantothenate kinase 4 (EC 2.7.1.33) (Pantothenic acid|
           kinase 4) (rPanK4)
          Length = 773

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/31 (35%), Positives = 19/31 (61%)
 Frame = +1

Query: 82  SIAHSIQKSGSYLHKGKNGHQDHQERGQISL 174
           ++ H + K  S+ H GK+  QDH+   +IS+
Sbjct: 53  TVQHKVAKVRSFDHPGKDAEQDHEPPYEISV 83

>STRC_MOUSE (Q8VIM6) Stereocilin precursor|
          Length = 1809

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = -2

Query: 178 WLEKSVPFPDGLDAHFSLYGGMNQTSGWSELLNAVLLWRWDWLYQQ 41
           +L++  P P GLD+  SL  GM++     ELL+      WD L ++
Sbjct: 718 YLQREEPTPPGLDSSLSLGSGMSK----MELLSCFSPVLWDLLQRE 759

>TSH1_MOUSE (Q5DTH5) Teashirt homolog 1 (Serologically defined colon cancer|
           antigen 3 homolog)
          Length = 1084

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/57 (26%), Positives = 27/57 (47%)
 Frame = +1

Query: 34  SNSADTTSPTATTGLRSIAHSIQKSGSYLHKGKNGHQDHQERGQISLTTATQYAVSP 204
           +++A T   TATT + S + S   S +  +   +G+  HQ     +L   + Y + P
Sbjct: 162 TSTASTACTTATTAITSCSTSTSHSSTTSNSSSSGYDWHQAALAKTLQQTSSYGLLP 218

>PSAB_HETTR (Q9XQV2) Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)|
           (PSI-B)
          Length = 776

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
 Frame = -2

Query: 166 SVPFPDGL-DAHF-----SLYGGMNQTSGWSELLNAVLLWRWDWLYQQNCYGVNEV 17
           ++P   G+ D HF     +++GG++ TSG SE +       ++WLY      V E+
Sbjct: 95  TMPIAHGIWDPHFGAQGEAVWGGVSATSGGSEAVVVSYSGIYNWLYAVGFTSVYEI 150


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,896,065
Number of Sequences: 219361
Number of extensions: 997518
Number of successful extensions: 2296
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2295
length of database: 80,573,946
effective HSP length: 90
effective length of database: 60,831,456
effective search space used: 1459954944
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)