ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbastl55d03 |
|---|---|
| Clone Library Name | barley_pub |
>MTH2_DROME (Q9VRN2) Probable G-protein coupled receptor Mth-like 2 precursor| (Protein methuselah-like 2) Length = 518 Score = 31.6 bits (70), Expect = 0.48 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAV 91 ICY+ L F LL L+ S+ FC + G +G FF + Sbjct: 253 ICYMMCLFFGYLFLLLDLWELSLDFCKAAGFLGYFFVM 290
>MTH_DROME (O97148) G-protein coupled receptor Mth precursor (Protein| methuselah) Length = 514 Score = 31.2 bits (69), Expect = 0.63 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAV 91 ICY+ L F LL L+ S+ FC G +G FF + Sbjct: 251 ICYMVCLFMGYLFLLLDLWQISISFCKPAGFLGYFFVM 288
>MTH_DROSI (P83120) G-protein coupled receptor Mth precursor (Protein| methuselah) Length = 515 Score = 30.0 bits (66), Expect = 1.4 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAV 91 ICY+ L F L L+ S+ FC G++G FF + Sbjct: 251 ICYMVCLFMGYLFLLFDLWQISISFCKPAGVLGYFFVM 288
>HXUC2_HAEIN (P45357) Heme/hemopexin utilization protein C precursor| Length = 725 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +2 Query: 203 ILNGYHHGCNHRKTGGKNTINATAYKQ 283 +++G+++ ++ +TG N +N TAYKQ Sbjct: 190 LISGFYNNADNLRTGKGNKLNNTAYKQ 216
>HT1_TRYVI (Q27115) Glucose transporter HT1| Length = 543 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/46 (30%), Positives = 25/46 (54%) Frame = -3 Query: 147 STSMCFCWSVGLVGLFFAVYDGISGCAL*SHLSVCSALNAKVSFVP 10 ST +S+G V ++ +Y+ SGC+ CS N+K +++P Sbjct: 45 STGSLNGFSIGFVAVYMHLYEIFSGCSALESSGACSG-NSKCTWIP 89
>HXUC1_HAEIN (P44600) Heme/hemopexin utilization protein C precursor| Length = 723 Score = 28.9 bits (63), Expect = 3.1 Identities = 10/27 (37%), Positives = 20/27 (74%) Frame = +2 Query: 203 ILNGYHHGCNHRKTGGKNTINATAYKQ 283 +++G+++ ++ +TG N +N TAYKQ Sbjct: 190 LISGFYNNADNLRTGKGNKLNNTAYKQ 216
>MTH3_DROME (Q9V818) Probable G-protein coupled receptor Mth-like 3 precursor| (Protein methuselah-like 3) Length = 511 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAV 91 ICYL L +F +L ++ S FC + G +G F + Sbjct: 248 ICYLASLFLGYFFLVLNVWKYSSGFCVTAGFLGYFSVI 285
>MTH_DROYA (Q9GT50) G-protein coupled receptor Mth precursor (Protein| methuselah) Length = 517 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/38 (34%), Positives = 20/38 (52%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAV 91 +CY+ L + LL L+ S FC + G +G FF + Sbjct: 254 MCYMVCLFMAYLLLLLNLWQMSQNFCITAGFLGYFFVM 291
>LOLD_AGRT5 (Q8UFV7) Lipoprotein-releasing system ATP-binding protein lolD| Length = 227 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 8/52 (15%) Frame = +2 Query: 59 LYRAHPLIPSYTAKNKPTRP--------TDQQKHMDVEYRYNKVNHREDHKP 190 +Y+ H L+P +TA P + +K Y +V HR +H+P Sbjct: 93 VYQFHHLLPEFTAVENVMMPQLIAGLTQAEARKRASALLDYMRVGHRGEHRP 144
>LOLD_SALTY (P61482) Lipoprotein-releasing system ATP-binding protein lolD| Length = 233 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +2 Query: 14 TKLTFAFRAE---QTLR*LYRAHPLIPSYTAKNKPTRP--TDQQKHMDVEYRYNK----- 163 +KL+ A +AE Q L +Y+ H L+P +TA P ++K +++ R + Sbjct: 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIDARAREMLHAV 133 Query: 164 -VNHREDHKP 190 + HR H+P Sbjct: 134 GLEHRATHRP 143
>LOLD_SALTI (P61481) Lipoprotein-releasing system ATP-binding protein lolD| Length = 233 Score = 28.1 bits (61), Expect = 5.3 Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 11/70 (15%) Frame = +2 Query: 14 TKLTFAFRAE---QTLR*LYRAHPLIPSYTAKNKPTRP--TDQQKHMDVEYRYNK----- 163 +KL+ A +AE Q L +Y+ H L+P +TA P ++K +++ R + Sbjct: 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEIDARAREMLHAV 133 Query: 164 -VNHREDHKP 190 + HR H+P Sbjct: 134 GLEHRATHRP 143
>PPIL4_SCHPO (Q9UUE4) Peptidyl-prolyl cis-trans isomerase cyp6 (EC 5.2.1.8)| (PPIase cyp6) (Rotamase cyp8) Length = 432 Score = 27.7 bits (60), Expect = 7.0 Identities = 10/33 (30%), Positives = 21/33 (63%) Frame = +2 Query: 98 KNKPTRPTDQQKHMDVEYRYNKVNHREDHKPKR 196 K +R D++ H + RY++ N+R+D++ +R Sbjct: 337 KRSSSRSDDREYHRRSDGRYDRSNYRDDYRHRR 369
>MTH4_DROME (Q9V817) Probable G-protein coupled receptor Mth-like 4 precursor| (Protein methuselah-like 4) Length = 480 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/35 (37%), Positives = 19/35 (54%) Frame = -3 Query: 204 ICYLFGL*SSLWFTLLYLYSTSMCFCWSVGLVGLF 100 ICYL L +F +L ++ S FC + G +G F Sbjct: 245 ICYLASLFLGYFFLVLNVWKYSSGFCVTAGFLGYF 279
>YK31_YEAST (P36142) Hypothetical UPF0206 protein YKR051w| Length = 418 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/38 (28%), Positives = 18/38 (47%) Frame = -3 Query: 189 GL*SSLWFTLLYLYSTSMCFCWSVGLVGLFFAVYDGIS 76 G+ +WF Y + T +C W + +F V+ IS Sbjct: 141 GILQYVWFKPFYCFGTLICSAWKLPKFEIFLNVFYNIS 178
>RPB1_PLAFD (P14248) DNA-directed RNA polymerase II largest subunit (EC 2.7.7.6)| Length = 2452 Score = 27.3 bits (59), Expect = 9.1 Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%) Frame = +2 Query: 74 PLIPSYTAKN---KPTRPTDQQKHMDVEYRYN 160 P P+Y A N PT P +Q M+V +YN Sbjct: 2253 PTSPTYNANNAYYSPTSPKNQNDQMNVNSQYN 2284
>LOLD_ECOLI (P75957) Lipoprotein-releasing system ATP-binding protein lolD| Length = 233 Score = 27.3 bits (59), Expect = 9.1 Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 11/70 (15%) Frame = +2 Query: 14 TKLTFAFRAE---QTLR*LYRAHPLIPSYTAKNKPTRP--TDQQKHMDVEYRYNK----- 163 +KL+ A +AE Q L +Y+ H L+P +TA P ++K ++ R + Sbjct: 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLKAV 133 Query: 164 -VNHREDHKP 190 ++HR +H+P Sbjct: 134 GLDHRANHRP 143 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 52,611,632 Number of Sequences: 219361 Number of extensions: 940871 Number of successful extensions: 2977 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2869 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2976 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 1386249648 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
