ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, com... 46 0.084
2emb|CR759881.16| Zebrafish DNA sequence from clone CH211-165K16 ... 46 0.084
3gb|AC183495.1| Brassica oleracea Contig A, complete sequence 46 0.084
4emb|BX511124.5| Zebrafish DNA sequence from clone CH211-260P9 in... 46 0.084
5gb|AC167246.2| Mus musculus BAC clone RP23-401H11 from chromosom... 44 0.33
6gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome... 42 1.3
7gb|AC122510.5| Mus musculus BAC clone RP24-445P13 from chromosom... 42 1.3
8emb|AL606752.11| Human DNA sequence from clone RP11-740C1 on chr... 42 1.3
9gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, comp... 42 1.3
10gb|DQ022190.1| Enterococcus gallinarum strain N04-0414 vancomyci... 42 1.3
11dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12gb|AF162694.1|AF162694 Enterococcus gallinarum vanC vancomycin-r... 42 1.3
13gb|CY005861.1| Influenza A virus (A/gull/MN/945/1980(H13N6)) seg... 42 1.3
14gb|CY005388.1| Influenza A virus (A/herring gull/DE/660/1988(H13... 42 1.3
15gb|CY005383.1| Influenza A virus (A/laughing gull/DE/554/1988(H1... 42 1.3
16gb|CY005372.1| Influenza A virus (A/shorebird/NJ/840/1986(H13N3)... 42 1.3
17gb|CY005067.1| Influenza A virus (A/laughing gull/DE/2838/1987(H... 42 1.3
18gb|CY004877.1| Influenza A virus (A/herring gull/DE/665/1988(H4N... 42 1.3
19gb|CY004563.1| Influenza A virus (A/herring gull/DE/712/1988(H16... 42 1.3
20gb|CY004453.1| Influenza A virus (A/herring gull/NJ/782/1986(H13... 42 1.3
21gb|CY004446.1| Influenza A virus (A/shorebird/DE/68/2004(H13N9))... 42 1.3
22gb|CY004388.1| Influenza A virus (A/herring gull/NJ/780/1986(H1N... 42 1.3
23gb|CY003897.1| Influenza A virus (A/herring gull/DE/475/1986(H13... 42 1.3
24dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26gb|AY684899.1| Influenza A virus (A/black-headed gull/Sweden/5/9... 42 1.3
27gb|AY684898.1| Influenza A virus (A/black-headed gull/Sweden/2/9... 42 1.3
28gb|AY684897.1| Influenza A virus (A/black-headed gull/Sweden/1/9... 42 1.3
29gb|AY684896.1| Influenza A virus (A/black-headed gull/Netherland... 42 1.3
30emb|AL355074.5|CNS05TC8 Human chromosome 14 DNA sequence BAC R-7... 42 1.3
31gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complet... 42 1.3
32gb|DQ021842.1| Influenza A virus (A/ruddy turnstone/NJ/1407/01(H... 42 1.3
33gb|M30757.1|FLANPO Influenza A/gull/Minnesota/945/80 (H13N6) nuc... 42 1.3
34gb|M30756.1|FLANPL Influenza A/gull/Maryland/1815/79 (H13N6) nuc... 42 1.3
35gb|M30755.1|FLANPK Influenza A/gull/Maryland/1824/78 (H13N9) nuc... 42 1.3
36gb|M30753.1|FLANPI Influenza A/gull/Astrakhan/227/84 (H13N6) nuc... 42 1.3
37gb|M30752.1|FLANPH Influenza A/gull/Massachussetts/26/80 (H13N6)... 42 1.3
38gb|AC150499.3| Bos taurus BAC CH240-105M18 (Children's Hospital... 40 5.2
39gb|AC107795.17| Mus musculus chromosome 1, clone RP23-433P9, com... 40 5.2
40gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 5.2
41gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 5.2
42gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, comple... 40 5.2
43gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete se... 40 5.2
44ref|XM_505771.1| Yarrowia lipolytica CLIB122, YALI0F23023g predi... 40 5.2
45gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence 40 5.2
46emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H1... 40 5.2
47emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 o... 40 5.2
48emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chro... 40 5.2
49gb|AC117467.3| Homo sapiens 3 BAC RP11-669C7 (Roswell Park Cance... 40 5.2
50gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell... 40 5.2
51gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswel... 40 5.2
52ref|XM_693432.1| PREDICTED: Danio rerio similar to F-box and leu... 40 5.2
53gb|AC008703.6| Homo sapiens chromosome 5 clone CTB-76P12, comple... 40 5.2
54ref|XM_688213.1| PREDICTED: Danio rerio similar to F-box and leu... 40 5.2
55gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold 40 5.2
56gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11... 40 5.2
57gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 5.2
58dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 5.2
59dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone... 40 5.2
60gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 5.2
61gb|AC004478.1|AC004478 Homo Sapiens Chromosome X clone bWXD312, ... 40 5.2
62emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.2
63gb|U52597.1|AIU52597 Avian infectious bronchitis virus N9/74 nuc... 40 5.2
64dbj|AP004969.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 5.2
65emb|AL807794.6| Mouse DNA sequence from clone RP23-192K24 on chr... 40 5.2 
>gb|AC165415.5| Mus musculus chromosome 15, clone RP23-17G19, complete sequence
          Length = 227254

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 144    tggagtacagatataacaaagta 166
              |||||||||||||||||||||||
Sbjct: 144024 tggagtacagatataacaaagta 144046
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>emb|CR759881.16| Zebrafish DNA sequence from clone CH211-165K16 in linkage group 18,
             complete sequence
          Length = 123400

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 233   cacaggaagacaggaggaaaaaa 255
             |||||||||||||||||||||||
Sbjct: 30681 cacaggaagacaggaggaaaaaa 30703
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>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 262    caatgctacagcctacaagcaaa 284
              |||||||||||||||||||||||
Sbjct: 168381 caatgctacagcctacaagcaaa 168359
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>emb|BX511124.5| Zebrafish DNA sequence from clone CH211-260P9 in linkage group 18,
             complete sequence
          Length = 149227

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 233   cacaggaagacaggaggaaaaaa 255
             |||||||||||||||||||||||
Sbjct: 80748 cacaggaagacaggaggaaaaaa 80770
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>gb|AC167246.2| Mus musculus BAC clone RP23-401H11 from chromosome 9, complete sequence
          Length = 160140

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 85    atcatatactgcaaagaacaag 106
             ||||||||||||||||||||||
Sbjct: 90474 atcatatactgcaaagaacaag 90453
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>gb|AC147047.2| Mus musculus BAC clone RP23-97D19 from chromosome 6, complete sequence
          Length = 239653

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    caaagaacaagcccaccaggc 116
             |||||||||||||||||||||
Sbjct: 21177 caaagaacaagcccaccaggc 21197
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>gb|AC122510.5| Mus musculus BAC clone RP24-445P13 from chromosome 6, complete sequence
          Length = 163800

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 96    caaagaacaagcccaccaggc 116
             |||||||||||||||||||||
Sbjct: 47961 caaagaacaagcccaccaggc 47981
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>emb|AL606752.11| Human DNA sequence from clone RP11-740C1 on chromosome 1 Contains the
             OR10J5 gene for olfactory receptor family 10 subfamily J
             member 5 and an amyloid P component serum (APCS)
             pseudogene, complete sequence
          Length = 87134

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 300   cagaagtttcttcaggagataacca 324
             |||||||||| ||||||||||||||
Sbjct: 81836 cagaagtttcctcaggagataacca 81812
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>gb|AC092812.2| Homo sapiens chromosome 1 clone RP11-536F12, complete sequence
          Length = 160903

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 199   acatattttgaatggctacca 219
             |||||||||||||||||||||
Sbjct: 79775 acatattttgaatggctacca 79755
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>gb|DQ022190.1| Enterococcus gallinarum strain N04-0414 vancomycin resistance gene
            cluster, complete sequence; and vacuolar-type sodium
            ATPase subunit D (ntpD) gene, partial cds
          Length = 6216

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  accatcatggctgcaatcaca 236
            |||||||||||||||||||||
Sbjct: 1851 accatcatggctgcaatcaca 1831
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 85      atcatatactgcaaagaacaa 105
               |||||||||||||||||||||
Sbjct: 3329733 atcatatactgcaaagaacaa 3329753
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>gb|AF162694.1|AF162694 Enterococcus gallinarum vanC vancomycin-resistance gene cluster,
            complete sequence
          Length = 6963

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  accatcatggctgcaatcaca 236
            |||||||||||||||||||||
Sbjct: 3057 accatcatggctgcaatcaca 3037
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>gb|CY005861.1| Influenza A virus (A/gull/MN/945/1980(H13N6)) segment 5, complete
            sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY005388.1| Influenza A virus (A/herring gull/DE/660/1988(H13N6)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY005383.1| Influenza A virus (A/laughing gull/DE/554/1988(H13N3)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY005372.1| Influenza A virus (A/shorebird/NJ/840/1986(H13N3)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY005067.1| Influenza A virus (A/laughing gull/DE/2838/1987(H13N2)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY004877.1| Influenza A virus (A/herring gull/DE/665/1988(H4N6)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY004563.1| Influenza A virus (A/herring gull/DE/712/1988(H16N3)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY004453.1| Influenza A virus (A/herring gull/NJ/782/1986(H13N2)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY004446.1| Influenza A virus (A/shorebird/DE/68/2004(H13N9)) segment 5, complete
            sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY004388.1| Influenza A virus (A/herring gull/NJ/780/1986(H1N3)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|CY003897.1| Influenza A virus (A/herring gull/DE/475/1986(H13N2)) segment 5,
            complete sequence
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0701D05
          Length = 172161

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   atcatatactgcaaagaacaa 105
            |||||||||||||||||||||
Sbjct: 8103 atcatatactgcaaagaacaa 8123
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>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1189A09
          Length = 167761

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 85     atcatatactgcaaagaacaa 105
              |||||||||||||||||||||
Sbjct: 147362 atcatatactgcaaagaacaa 147382
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>gb|AY684899.1| Influenza A virus (A/black-headed gull/Sweden/5/99(H16N3))
            nucleoprotein (NP) gene, partial cds
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1270 accatcatggctgcattcacaggaa 1294
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>gb|AY684898.1| Influenza A virus (A/black-headed gull/Sweden/2/99(H16N3))
            nucleoprotein (NP) gene, partial cds
          Length = 1494

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1270 accatcatggctgcattcacaggaa 1294
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>gb|AY684897.1| Influenza A virus (A/black-headed gull/Sweden/1/99(H13N6))
            nucleoprotein (NP) gene, partial cds
          Length = 1533

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|AY684896.1| Influenza A virus (A/black-headed gull/Netherlands/1/00(H13N8))
            nucleoprotein (NP) gene, partial cds
          Length = 1531

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>emb|AL355074.5|CNS05TC8 Human chromosome 14 DNA sequence BAC R-750I4 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 183672

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 78    taattccatcatatactgcaa 98
             |||||||||||||||||||||
Sbjct: 12525 taattccatcatatactgcaa 12505
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>gb|AC149276.2| Mus musculus BAC clone RP24-316O8 from 6, complete sequence
          Length = 193191

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 96     caaagaacaagcccaccaggc 116
              |||||||||||||||||||||
Sbjct: 149142 caaagaacaagcccaccaggc 149162
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>gb|DQ021842.1| Influenza A virus (A/ruddy turnstone/NJ/1407/01(H4N6)) nucleoprotein
            gene, partial cds
          Length = 1476

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1270 accatcatggctgcattcacaggaa 1294
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>gb|M30757.1|FLANPO Influenza A/gull/Minnesota/945/80 (H13N6) nucleoprotein (seg 5) mRNA,
            complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|M30756.1|FLANPL Influenza A/gull/Maryland/1815/79 (H13N6) nucleoprotein (seg 5) mRNA,
            complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|M30755.1|FLANPK Influenza A/gull/Maryland/1824/78 (H13N9) nucleoprotein (seg 5) mRNA,
            complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|M30753.1|FLANPI Influenza A/gull/Astrakhan/227/84 (H13N6) nucleoprotein (seg 5) mRNA,
            complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|M30752.1|FLANPH Influenza A/gull/Massachussetts/26/80 (H13N6) nucleoprotein (seg 5)
            mRNA, complete cds
          Length = 1565

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 216  accatcatggctgcaatcacaggaa 240
            ||||||||||||||| |||||||||
Sbjct: 1315 accatcatggctgcattcacaggaa 1339
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>gb|AC150499.3| Bos taurus  BAC CH240-105M18 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 205738

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 1     ggagaaaagaggaacaaagctaac 24
             ||||||||||||| ||||||||||
Sbjct: 24789 ggagaaaagaggatcaaagctaac 24812
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>gb|AC107795.17| Mus musculus chromosome 1, clone RP23-433P9, complete sequence
          Length = 216501

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 232   tcacaggaagacaggaggaaaaaa 255
             |||||||| |||||||||||||||
Sbjct: 98580 tcacaggatgacaggaggaaaaaa 98557
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>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    taagataacttttcggttgt 347
              ||||||||||||||||||||
Sbjct: 766635 taagataacttttcggttgt 766616
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>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    taagataacttttcggttgt 347
              ||||||||||||||||||||
Sbjct: 747044 taagataacttttcggttgt 747025
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>gb|AC006353.3| Homo sapiens PAC clone RP5-1062J16 from 7, complete sequence
          Length = 158090

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   acaggaggaaaaaatacaat 261
             ||||||||||||||||||||
Sbjct: 54229 acaggaggaaaaaatacaat 54210
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>gb|AC127429.25| Medicago truncatula clone mth2-9o20, complete sequence
          Length = 130703

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    ttttgaatggctaccatcat 223
              ||||||||||||||||||||
Sbjct: 120290 ttttgaatggctaccatcat 120309
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>ref|XM_505771.1| Yarrowia lipolytica CLIB122, YALI0F23023g predicted mRNA
          Length = 2988

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 298  aacagaagtttcttcaggag 317
            ||||||||||||||||||||
Sbjct: 1928 aacagaagtttcttcaggag 1947
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>gb|AC120541.8| Mus musculus, clone RP23-286L18, complete sequence
          Length = 171942

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     gagcagacactgagatgact 60
              ||||||||||||||||||||
Sbjct: 108791 gagcagacactgagatgact 108772
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>emb|AL078603.4|HSJ364H10 Human DNA sequence from clone RP3-364H10 on chromosome 6q16.1-16.3,
              complete sequence
          Length = 150355

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     acttttgcattcagagcaga 42
              ||||||||||||||||||||
Sbjct: 107551 acttttgcattcagagcaga 107532
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>emb|AL020994.1|HS929C8 Human DNA sequence from clone CTA-929C8 on chromosome 22q12.1-12.3,
              complete sequence
          Length = 139190

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 136    catggatgtggagtacagat 155
              ||||||||||||||||||||
Sbjct: 116566 catggatgtggagtacagat 116547
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>emb|BX470127.2| Mouse DNA sequence from clone RP24-280A6 on chromosome 4, complete
             sequence
          Length = 142803

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   acagatataacaaagtaaac 169
             ||||||||||||||||||||
Sbjct: 23752 acagatataacaaagtaaac 23771
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>gb|AC117467.3| Homo sapiens 3 BAC RP11-669C7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 90000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 235   caggaagacaggaggaaaaa 254
             ||||||||||||||||||||
Sbjct: 79662 caggaagacaggaggaaaaa 79643
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>gb|AC091206.3| Drosophila melanogaster 3L BAC RP98-19M9 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 178019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   aagcaaaaggcaaccaagag 297
             ||||||||||||||||||||
Sbjct: 58082 aagcaaaaggcaaccaagag 58063
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>gb|AC010018.6| Drosophila melanogaster 3L BAC RP98-17M19 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 172284

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 278   aagcaaaaggcaaccaagag 297
             ||||||||||||||||||||
Sbjct: 68127 aagcaaaaggcaaccaagag 68146
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>ref|XM_693432.1| PREDICTED: Danio rerio similar to F-box and leucine-rich repeat
           protein 13 (LOC570005), partial mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 245 ggaggaaaaaatacaatcaatgctacag 272
           |||||||||||||| |||||| ||||||
Sbjct: 24  ggaggaaaaaatactatcaatcctacag 51
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>gb|AC008703.6| Homo sapiens chromosome 5 clone CTB-76P12, complete sequence
          Length = 214187

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   tgctacagcctacaagcaaa 284
             ||||||||||||||||||||
Sbjct: 95098 tgctacagcctacaagcaaa 95079
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>ref|XM_688213.1| PREDICTED: Danio rerio similar to F-box and leucine-rich repeat
           protein 13 (LOC564889), partial mRNA
          Length = 2432

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 245 ggaggaaaaaatacaatcaatgctacag 272
           |||||||||||||| |||||| ||||||
Sbjct: 365 ggaggaaaaaatactatcaatcctacag 392
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>gb|DP000053.1| Oryctolagus cuniculus target 126 genomic scaffold
          Length = 470930

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     gctaacttttgcattcagag 38
              ||||||||||||||||||||
Sbjct: 223685 gctaacttttgcattcagag 223666
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>gb|AE003477.3| Drosophila melanogaster chromosome 3L, section 11 of 83 of the complete
              sequence
          Length = 297894

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    aagcaaaaggcaaccaagag 297
              ||||||||||||||||||||
Sbjct: 277192 aagcaaaaggcaaccaagag 277211
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>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    taagataacttttcggttgt 347
              ||||||||||||||||||||
Sbjct: 744965 taagataacttttcggttgt 744946
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>dbj|AP003477.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB2047A4
          Length = 179110

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 232    tcacaggaagacaggaggaaaaaa 255
              |||||| |||||||||||||||||
Sbjct: 156475 tcacagaaagacaggaggaaaaaa 156498
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>dbj|AP005791.2| Homo sapiens genomic DNA, chromosome 8q22, clone: KB1357H4, complete
             sequence
          Length = 160208

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 232   tcacaggaagacaggaggaaaaaa 255
             |||||| |||||||||||||||||
Sbjct: 77598 tcacagaaagacaggaggaaaaaa 77621
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 246     gaggaaaaaatacaatcaatgcta 269
               |||||||||||| |||||||||||
Sbjct: 1053186 gaggaaaaaatagaatcaatgcta 1053163
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>gb|AC004478.1|AC004478 Homo Sapiens Chromosome X clone bWXD312, complete sequence
          Length = 151822

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   accatcatggctgcaatcacagga 239
             |||||| |||||||||||||||||
Sbjct: 68965 accatcctggctgcaatcacagga 68942
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 298     aacagaagtttcttcaggag 317
               ||||||||||||||||||||
Sbjct: 3016949 aacagaagtttcttcaggag 3016930
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>gb|U52597.1|AIU52597 Avian infectious bronchitis virus N9/74 nucleocapsid protein mRNA,
            partial cds
          Length = 1717

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 276  acaagcaaaaggcaaccaagagaa 299
            ||||||||||||||||||| ||||
Sbjct: 1344 acaagcaaaaggcaaccaaaagaa 1321
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>dbj|AP004969.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT34P02, TM0146,
             complete sequence
          Length = 110752

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 150   acagatataacaaagtaaaccata 173
             ||||||||||||||||||| ||||
Sbjct: 23465 acagatataacaaagtaaatcata 23442
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>emb|AL807794.6| Mouse DNA sequence from clone RP23-192K24 on chromosome 4, complete
             sequence
          Length = 96244

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 234   acaggaagacaggaggaaaaaata 257
             |||||||||||||||| |||||||
Sbjct: 78020 acaggaagacaggaggtaaaaata 77997


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,654,167
Number of Sequences: 3902068
Number of extensions: 4654167
Number of successful extensions: 98631
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98441
Number of HSP's gapped (non-prelim): 190
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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