>SEM1A_DROME (Q24322) Semaphorin-1A precursor (Semaphorin-I) (Sema I)|
          Length = 850

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -2

Query: 344 LCWRGPKQSI*QKWMIKQDEPQSHKFCKFKILPQAGELTPFGSNFFREVC 195
           L W  P+       +  +DE     + +  ++P  G L   G+N FR +C
Sbjct: 80  LVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMC 129

>CNTN2_HUMAN (Q02246) Contactin-2 precursor (Axonin-1) (Axonal glycoprotein|
           TAG-1) (Transient axonal glycoprotein 1) (TAX-1)
          Length = 1040

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 11/45 (24%)
 Frame = +2

Query: 101 TKCSLQTTGFILCFTNNKN-SLSANA----------FRLNPVRRL 202
           +K SL+ +G   C   NK+ ++ A+A          FRLNPVRRL
Sbjct: 383 SKLSLEDSGMYQCVAENKHGTIYASAELAVQALAPDFRLNPVRRL 427

>YA4G_SCHPO (Q09733) Hypothetical protein C31A2.16 in chromosome I|
          Length = 1101

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = -3

Query: 379 PSRLLLGLVRTYSAGGALXXXXXXXXXXNKMNHNHINSANSKF 251
           PS++ L L R Y+ GG              ++HN+I+  + KF
Sbjct: 737 PSKISLSLNRFYNQGGLSKSCATLPSQMYNLDHNNISQKSLKF 779

>TPO_MOUSE (P40226) Thrombopoietin precursor (Megakaryocyte colony-stimulating|
           factor) (Myeloproliferative leukemia virus oncogene
           ligand) (C-mpl ligand) (ML) (Megakaryocyte growth and
           development factor) (MGDF)
          Length = 356

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +3

Query: 9   KSSLALFSSFIQEVETASPGLLSNLLSYKI*LNAAYRQQVSSFVLQIT 152
           ++S  L ++F     TA PGLLS L  +++ +      Q S   +QI+
Sbjct: 198 RTSGLLETNFSVTARTAGPGLLSRLQGFRVKITPGQLNQTSRSPVQIS 245

>TPP2_HUMAN (P29144) Tripeptidyl-peptidase 2 (EC 3.4.14.10)|
           (Tripeptidyl-peptidase II) (TPP-II) (Tripeptidyl
           aminopeptidase)
          Length = 1248

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 302 MIKQDEPQSHKFCKFKILPQAGELT 228
           ++KQ   +SH+F KF  LP+ G LT
Sbjct: 694 LVKQRAYRSHEFYKFCSLPEKGTLT 718


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,815,634
Number of Sequences: 219361
Number of extensions: 918108
Number of successful extensions: 1609
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1589
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 1380984984
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)