ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55c10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosp... 28 8.9

>PLCG1_RAT (P10686) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
           gamma 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
           (PLC-gamma-1) (Phospholipase C-gamma-1) (PLC-II)
           (PLC-148)
          Length = 1290

 Score = 27.7 bits (60), Expect = 8.9
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 3   PEGTSHHRLHYWAKQGIFSAHDDALTGSQLS*ASACRSDPSCTHPYC 143
           PE  ++   HYW    I S+H+  LTG Q S  S+  +   C    C
Sbjct: 319 PETMNNPLSHYW----ISSSHNTYLTGDQFSSESSLEAYARCLRMGC 361


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,624,163
Number of Sequences: 219361
Number of extensions: 374098
Number of successful extensions: 983
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 983
length of database: 80,573,946
effective HSP length: 30
effective length of database: 73,993,116
effective search space used: 1775834784
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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