ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55c08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 i... 44 0.31
2gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 ma... 42 1.2
3emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in... 42 1.2
4gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Canc... 42 1.2
5gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
6emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 i... 42 1.2
7emb|BX927401.14| Zebrafish DNA sequence from clone CH211-210H11 ... 42 1.2
8gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
9gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete ... 42 1.2
10emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in... 42 1.2
11dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
13dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
14emb|BX548076.6| Zebrafish DNA sequence from clone CH211-154A22 i... 42 1.2
15dbj|AK063740.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
16emb|BX294165.10| Zebrafish DNA sequence from clone DKEYP-20E4 in... 42 1.2
17gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
18emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chr... 42 1.2
19ref|XM_475386.1| Oryza sativa (japonica cultivar-group), predic... 40 4.8
20gb|AC116774.9| Mus musculus chromosome 3, clone RP24-361N19, com... 40 4.8
21gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome... 40 4.8
22gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, co... 40 4.8
23gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome 40 4.8
24gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome... 40 4.8
25gb|AC104683.3| Danio rerio clone 102M10, complete sequence 40 4.8
26gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complet... 40 4.8
27emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chr... 40 4.8
28gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, co... 40 4.8
29gb|AC114486.2| Homo sapiens chromosome 1 clone RP11-371A23, comp... 40 4.8
30gb|AC090095.7| Homo sapiens, clone RP11-296C13, complete sequence 40 4.8
31gb|AC018443.9|AC018443 Homo sapiens chromosome 8, clone RP11-674... 40 4.8
32gb|AC053480.5|AC053480 Homo sapiens chromosome 8, clone RP11-526... 40 4.8
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.8
34gb|AC084428.1|CBRG45F20 Caenorhabditis briggsae cosmid G45F20, c... 40 4.8
35dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.8
36gb|AC011990.7| Homo sapiens chromosome 17, clone CTD-2378E21, co... 40 4.8
37emb|AL772151.17| Mouse DNA sequence from clone RP23-320C6 on chr... 40 4.8
38emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11,... 40 4.8
39gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, co... 40 4.8
40dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.8
41gb|AC005939.1|AC005939 Homo sapiens chromosome 17, clone hRPK.46... 40 4.8
42dbj|AP005853.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 4.8
43gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, comple... 40 4.8
44gb|DQ238619.1| Mus musculus tolloid-like 1 gene, partial sequence 40 4.8
45emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, ... 40 4.8
46emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 4.8 
>emb|BX294662.13| Zebrafish DNA sequence from clone DKEYP-117E6 in linkage group 20,
              complete sequence
          Length = 154558

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 314    ccagttttatttcttctaaatg 335
              ||||||||||||||||||||||
Sbjct: 128942 ccagttttatttcttctaaatg 128963
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>gb|AC127172.13| Mus musculus strain C57BL/6J clone rp23-387d2 map 17, complete sequence
          Length = 203077

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    ggggacgggagagggagggga 204
              |||||||||||||||||||||
Sbjct: 103538 ggggacgggagagggagggga 103558
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>emb|CR376844.12| Zebrafish DNA sequence from clone DKEYP-51B7 in linkage group 8,
             complete sequence
          Length = 203472

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   cagttttatttcttctaaatg 335
             |||||||||||||||||||||
Sbjct: 86656 cagttttatttcttctaaatg 86636
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>gb|AC117459.6| Homo sapiens 3 BAC RP11-343L17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153618

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 315    cagttttatttcttctaaatgctct 339
              ||||||||||||||| |||||||||
Sbjct: 130147 cagttttatttcttccaaatgctct 130123
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>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0015J03, complete sequence
          Length = 165933

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 206   tacaacaatacacgatttaaaaatt 230
             ||||| |||||||||||||||||||
Sbjct: 56719 tacaataatacacgatttaaaaatt 56743
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>emb|BX294162.23| Zebrafish DNA sequence from clone CH211-270C5 in linkage group 10,
             complete sequence
          Length = 150791

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 76    cttacaatgaacaagtaaaacataa 100
             |||||||||||||| ||||||||||
Sbjct: 92299 cttacaatgaacaaataaaacataa 92323
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>emb|BX927401.14| Zebrafish DNA sequence from clone CH211-210H11 in linkage group 19,
             complete sequence
          Length = 137958

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   cagttttatttcttctaaatg 335
             |||||||||||||||||||||
Sbjct: 87517 cagttttatttcttctaaatg 87497
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>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
            OSJNBb0015J03, complete sequence
          Length = 135940

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 206  tacaacaatacacgatttaaaaatt 230
            ||||| |||||||||||||||||||
Sbjct: 3282 tacaataatacacgatttaaaaatt 3258
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>gb|AC160836.12| Medicago truncatula clone mth2-115l23, complete sequence
          Length = 116158

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 319   tttatttcttctaaatgctct 339
             |||||||||||||||||||||
Sbjct: 95921 tttatttcttctaaatgctct 95941
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>emb|BX511229.6| Zebrafish DNA sequence from clone CH211-194H2 in linkage group 11,
             complete sequence
          Length = 211986

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 315   cagttttatttcttctaaatg 335
             |||||||||||||||||||||
Sbjct: 94981 cagttttatttcttctaaatg 95001
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 206     tacaacaatacacgatttaaaaatt 230
               ||||| |||||||||||||||||||
Sbjct: 4289178 tacaataatacacgatttaaaaatt 4289202
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 175      cacggggacggggacgggaga 195
                |||||||||||||||||||||
Sbjct: 23026788 cacggggacggggacgggaga 23026808
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>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0415C01
          Length = 138701

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 175   cacggggacggggacgggaga 195
             |||||||||||||||||||||
Sbjct: 97194 cacggggacggggacgggaga 97214
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>emb|BX548076.6| Zebrafish DNA sequence from clone CH211-154A22 in linkage group 15,
             complete sequence
          Length = 175161

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 76    cttacaatgaacaagtaaaacataa 100
             |||||||||||||||||||| ||||
Sbjct: 71620 cttacaatgaacaagtaaaaaataa 71596
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>dbj|AK063740.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-F07, full
           insert sequence
          Length = 749

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 175 cacggggacggggacgggaga 195
           |||||||||||||||||||||
Sbjct: 426 cacggggacggggacgggaga 446
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>emb|BX294165.10| Zebrafish DNA sequence from clone DKEYP-20E4 in linkage group 22,
             complete sequence
          Length = 125073

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 76    cttacaatgaacaagtaaaacataa 100
             |||||||||||||||||||| ||||
Sbjct: 70680 cttacaatgaacaagtaaaaaataa 70656
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 206     tacaacaatacacgatttaaaaatt 230
               ||||| |||||||||||||||||||
Sbjct: 4289999 tacaataatacacgatttaaaaatt 4290023
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>emb|AL589878.12| Mouse DNA sequence from clone RP23-351C7 on chromosome 15, complete
              sequence
          Length = 203949

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 184    ggggacgggagagggagggga 204
              |||||||||||||||||||||
Sbjct: 100060 ggggacgggagagggagggga 100040
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>ref|XM_475386.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2493

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  tcaatccagttttatttctt 328
            ||||||||||||||||||||
Sbjct: 2493 tcaatccagttttatttctt 2474
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>gb|AC116774.9| Mus musculus chromosome 3, clone RP24-361N19, complete sequence
          Length = 147728

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaattgcatttctcattcat 26
             ||||||||||||||||||||
Sbjct: 91039 aaattgcatttctcattcat 91020
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>gb|AC121361.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009E21, complete sequence
          Length = 153214

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   tcaatccagttttatttctt 328
             ||||||||||||||||||||
Sbjct: 45411 tcaatccagttttatttctt 45430
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>gb|AC104881.9| Mus musculus chromosome 18, clone RP23-244A24, complete sequence
          Length = 184796

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 91     taaaacataacttattatcttttg 114
              |||||| |||||||||||||||||
Sbjct: 140955 taaaacttaacttattatcttttg 140978
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>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
          Length = 490885

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 317    gttttatttcttctaaatgctctc 340
              |||||||||||||||||| |||||
Sbjct: 291775 gttttatttcttctaaattctctc 291798
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>gb|AC133100.5| Mus musculus BAC clone RP23-98O11 from chromosome 19, complete sequence
          Length = 204855

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   acgatttaaaaattggagcc 236
             ||||||||||||||||||||
Sbjct: 10002 acgatttaaaaattggagcc 9983
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>gb|AC104683.3| Danio rerio clone 102M10, complete sequence
          Length = 51808

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   aacaatacacgatttaaaaa 228
             ||||||||||||||||||||
Sbjct: 30069 aacaatacacgatttaaaaa 30050
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>gb|AC098728.3| Mus musculus BAC clone RP23-3H22 from 15, complete sequence
          Length = 245757

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 178   ggggacggggacgggagagggaggggac 205
             ||||| ||||| ||||||||||||||||
Sbjct: 74009 ggggagggggaggggagagggaggggac 74036
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>emb|AL359770.12| Human DNA sequence from clone RP11-286B9 on chromosome 13, complete
             sequence
          Length = 104638

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    ttgcatttctcattcatgtc 29
             ||||||||||||||||||||
Sbjct: 66317 ttgcatttctcattcatgtc 66336
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>gb|AC124231.17| Mus musculus chromosome 18, clone RP23-17N19, complete sequence
          Length = 219005

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 191    ggagagggaggggactacaa 210
              ||||||||||||||||||||
Sbjct: 179970 ggagagggaggggactacaa 179989
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>gb|AC114486.2| Homo sapiens chromosome 1 clone RP11-371A23, complete sequence
          Length = 179070

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   gggacgggagagggagggga 204
             ||||||||||||||||||||
Sbjct: 38668 gggacgggagagggagggga 38687
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>gb|AC090095.7| Homo sapiens, clone RP11-296C13, complete sequence
          Length = 194074

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 81    aatgaacaagtaaaacataa 100
             ||||||||||||||||||||
Sbjct: 94450 aatgaacaagtaaaacataa 94431
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>gb|AC018443.9|AC018443 Homo sapiens chromosome 8, clone RP11-674A24, complete sequence
          Length = 199810

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     aatgaacaagtaaaacataa 100
              ||||||||||||||||||||
Sbjct: 127445 aatgaacaagtaaaacataa 127426
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>gb|AC053480.5|AC053480 Homo sapiens chromosome 8, clone RP11-526P7, complete sequence
          Length = 158267

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 328  tctaaatgctctccctgccc 347
            ||||||||||||||||||||
Sbjct: 3537 tctaaatgctctccctgccc 3556
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 309      tcaatccagttttatttctt 328
                ||||||||||||||||||||
Sbjct: 22690212 tcaatccagttttatttctt 22690231
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>gb|AC084428.1|CBRG45F20 Caenorhabditis briggsae cosmid G45F20, complete sequence
          Length = 40493

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 249   ttcagcttcctatcaaaatc 268
             ||||||||||||||||||||
Sbjct: 36225 ttcagcttcctatcaaaatc 36244
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 179     gggacggggacgggagagggaggg 202
               ||||||||||||||| ||||||||
Sbjct: 4946689 gggacggggacgggacagggaggg 4946666
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>gb|AC011990.7| Homo sapiens chromosome 17, clone CTD-2378E21, complete sequence
          Length = 76700

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aagtgacacaagctggacac 177
             ||||||||||||||||||||
Sbjct: 73549 aagtgacacaagctggacac 73530
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>emb|AL772151.17| Mouse DNA sequence from clone RP23-320C6 on chromosome 4, complete
              sequence
          Length = 128073

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ggggacgggagagggagggg 203
              ||||||||||||||||||||
Sbjct: 122278 ggggacgggagagggagggg 122297
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>emb|AL935290.10| Zebrafish DNA sequence from clone CH211-270H11, complete sequence
          Length = 129665

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 96   cataacttattatcttttgg 115
            ||||||||||||||||||||
Sbjct: 1812 cataacttattatcttttgg 1831
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>gb|AC158772.5| Mus musculus chromosome 18, clone RP23-291M14, complete sequence
          Length = 198851

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 91    taaaacataacttattatcttttg 114
             |||||| |||||||||||||||||
Sbjct: 24305 taaaacttaacttattatcttttg 24328
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>dbj|AK065821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013043G04, full
            insert sequence
          Length = 3034

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 309  tcaatccagttttatttctt 328
            ||||||||||||||||||||
Sbjct: 2667 tcaatccagttttatttctt 2648
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>gb|AC005939.1|AC005939 Homo sapiens chromosome 17, clone hRPK.467_K_17, complete sequence
          Length = 179485

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 158   aagtgacacaagctggacac 177
             ||||||||||||||||||||
Sbjct: 13382 aagtgacacaagctggacac 13363
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>dbj|AP005853.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB265H3, complete
              sequence
          Length = 122073

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 328    tctaaatgctctccctgccc 347
              ||||||||||||||||||||
Sbjct: 108678 tctaaatgctctccctgccc 108697
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>gb|AC147185.2| Mus musculus BAC clone RP24-119J12 from 8, complete sequence
          Length = 164789

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aaaaattgcatttctcattc 24
             ||||||||||||||||||||
Sbjct: 90108 aaaaattgcatttctcattc 90127
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>gb|DQ238619.1| Mus musculus tolloid-like 1 gene, partial sequence
          Length = 2282

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 5   aaaaattgcatttctcattc 24
           ||||||||||||||||||||
Sbjct: 547 aaaaattgcatttctcattc 566
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>emb|AL807377.10| Zebrafish DNA sequence from clone CH211-229G3, complete sequence
          Length = 170231

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 315  cagttttatttcttctaaatgctc 338
            ||||||||| ||||||||||||||
Sbjct: 2731 cagttttatatcttctaaatgctc 2708
to top
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 176     acggggacggggacgggaga 195
               ||||||||||||||||||||
Sbjct: 1462780 acggggacggggacgggaga 1462761


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,334,319
Number of Sequences: 3902068
Number of extensions: 4334319
Number of successful extensions: 114786
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114497
Number of HSP's gapped (non-prelim): 289
length of query: 359
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 337
effective length of database: 17,147,199,772
effective search space: 5778606323164
effective search space used: 5778606323164
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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