>M3K6_HUMAN (O95382) Mitogen-activated protein kinase kinase kinase 6 (EC|
           2.7.11.25)
          Length = 1011

 Score = 32.7 bits (73), Expect = 0.36
 Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
 Frame = +3

Query: 207 AEKRSLQLRALSG*TRLQSSKQ--MRDPILSTQRPSLFPVSPRLACRPGNLPSGA 365
           AE ++  LR      RL++S Q  + DP L   + S  P SPR A RP + PS +
Sbjct: 600 AEAQAFLLRTFEPDPRLRASAQTLLGDPFLQPGKRSRSPSSPRHAPRPSDAPSAS 654

>Y966_TREPA (O83932) Hypothetical protein TP0966 precursor|
          Length = 544

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/83 (27%), Positives = 31/83 (37%)
 Frame = +2

Query: 149 RHKPACRPAAPRKTTSCEVCGEEKPTITGAVGLNTLTVLKANAGSHPKHTETKFVPRFAS 328
           R     RP  P     C +CG     +  AVG     V      + P HT ++ VP    
Sbjct: 4   RRMLCARPWGP-SCVVCALCGA-LAALVPAVGAQEQAVPAPGTPAPPAHTASEAVPPAPE 61

Query: 329 PRLSSRQPTLRCISRWKHPDGSV 397
           PR    QP+    +    P G+V
Sbjct: 62  PRAEGEQPSPLVPTALPVPGGAV 84

>ZN687_MOUSE (Q9D2D7) Zinc finger protein 687|
          Length = 1237

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = -2

Query: 418  PRTPTTTDRSIRVLPP*NAPEGRLPGRQARRGETGNK 308
            P T  ++  S   LP  ++PE   P ++ARRGE GNK
Sbjct: 918  PATEESSSSSEEELP--SSPEPPRPTKRARRGELGNK 952

>Y2340_MYCBO (P64994) Hypothetical protein Mb2340c|
          Length = 284

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -3

Query: 330 GEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSS--PHTSQLVVLRGAAGRQAG 157
           G  K     V+  + WD    L + +VFN   P +    +  P TS+LV LRGAA     
Sbjct: 112 GVGKEYLGWVTGPISWDHNTDL-SAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCR 170

Query: 156 LCR 148
           +C+
Sbjct: 171 VCK 173

>Y2313_MYCTU (P64993) Hypothetical protein Rv2313c/MT2376|
          Length = 284

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 21/63 (33%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
 Frame = -3

Query: 330 GEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSS--PHTSQLVVLRGAAGRQAG 157
           G  K     V+  + WD    L + +VFN   P +    +  P TS+LV LRGAA     
Sbjct: 112 GVGKEYLGWVTGPISWDHNTDL-SAAVFNGFLPAVARMRALDPVTSELVRLRGAAQHNCR 170

Query: 156 LCR 148
           +C+
Sbjct: 171 VCK 173

>RFAF_ECOLI (P37692) ADP-heptose--LPS heptosyltransferase 2 (EC 2.-.-.-)|
           (ADP-heptose--LPS heptosyltransferase II)
          Length = 348

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = +1

Query: 340 VQATYPQVHFTVEAPGWICPLLS 408
           +QA YPQ    V AP W  PLLS
Sbjct: 24  LQARYPQAIIDVMAPAWCRPLLS 46

>HIS6_THET8 (Q7SIB9) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -3

Query: 354 VGCLDDRRGEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSSPHTSQLVVL 184
           V CLD   G   +G N V++    DP  A R          V +  S+ H  + ++L
Sbjct: 8   VPCLDVHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEERAILL 64

>HIS6_THET2 (P62453) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 252

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/57 (28%), Positives = 24/57 (42%)
 Frame = -3

Query: 354 VGCLDDRRGEAKRGTNLVSVCLGWDPAFALRTVSVFNPTAPVIVGFSSPHTSQLVVL 184
           V CLD   G   +G N V++    DP  A R          V +  S+ H  + ++L
Sbjct: 8   VPCLDVHAGRVVKGVNFVNLRDAGDPVEAARAYDEAGADELVFLDISATHEERAILL 64

>NRIP3_HUMAN (Q9NQ35) Nuclear receptor-interacting protein 3 (Sarcoma antigen|
           NY-SAR-105)
          Length = 241

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 123 VTNDNNDQGDISQPAALQHLVR-QQAVKYAEKRSLQLRALSG*TRLQSSKQMR 278
           +T     + D+ + A+L+   R +QAV++  K S  L  L G  +L SSK M+
Sbjct: 7   LTEGGRKETDMREAASLRQQRRMKQAVQFIHKDSADLLPLDGLKKLGSSKDMQ 59

>GLYA2_PSEU2 (Q4ZM83) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 417

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 253 AYSPQSKCGIPS*AHRDQVCSPFRLASPVVQATYPQVHFTVEAPGWICPLL 405
           A+   +K  +P+      V S  R+ +P V     +V   VE  GWIC +L
Sbjct: 340 AHITVNKNSVPNDPQSPFVTSGLRIGTPAVTTRGFKVTQCVELAGWICDIL 390

>GLYA2_PSE14 (Q48CP3) Serine hydroxymethyltransferase 2 (EC 2.1.2.1) (Serine|
           methylase 2) (SHMT 2)
          Length = 417

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 16/51 (31%), Positives = 24/51 (47%)
 Frame = +1

Query: 253 AYSPQSKCGIPS*AHRDQVCSPFRLASPVVQATYPQVHFTVEAPGWICPLL 405
           A+   +K  +P+      V S  R+ +P V     +V   VE  GWIC +L
Sbjct: 340 AHITVNKNSVPNDPQSPFVTSGLRIGTPAVTTRGFKVTQCVELAGWICDIL 390


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,018,089
Number of Sequences: 219361
Number of extensions: 1214490
Number of successful extensions: 3325
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3325
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)