Clone Name | rbastl55c05 |
---|---|
Clone Library Name | barley_pub |
>gb|M90664.1|WHTE1B Wheat ubiquitin activating enzyme (E1) mRNA, complete cds Length = 3588 Score = 145 bits (73), Expect = 1e-31 Identities = 82/85 (96%) Strand = Plus / Minus Query: 338 gactagcggaagtaaaccgagacgagagggatatcgacgtcgttctcgtcctcgtcctcg 397 |||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||| Sbjct: 3349 gactagcggaagtaaaccgacacgagggggatgtcgacgtcgttctcgtcctcgtcctcg 3290 Query: 398 caggccacgccgatgtccaggtgcc 422 ||||||||||||||||||||||||| Sbjct: 3289 caggccacgccgatgtccaggtgcc 3265 Score = 109 bits (55), Expect = 7e-21 Identities = 131/155 (84%), Gaps = 11/155 (7%) Strand = Plus / Minus Query: 55 ttaaccgtaaccgatgtgtcctttgttcattcctcc-----caactatctgaatgcgacc 109 |||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct: 3576 ttaaccgtaaccgatgtgtctgttgttcattcctccaactccaactatttgactgcgacc 3517 Query: 110 aacgagcaaatagctgcaggaccagtgtaccacaaggagagaacatcttgaggtaaccat 169 ||| |||| ||| ||| ||||||||| |||||||| ||||||||||||| |||| ||| Sbjct: 3516 aaccagcagataactgtaggaccagtataccacaaagagagaacatctt-aggtgacc-- 3460 Query: 170 gatatgatagatcgatcagcgcgagagcggcggct 204 |||||||| | ||||||||||||||||||||| Sbjct: 3459 ---atgatagagctatcagcgcgagagcggcggct 3428
>ref|NM_185567.2| Oryza sativa (japonica cultivar-group), mRNA Length = 3522 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 344 cggaagtaaaccgagacgagagggatatcgacgtcgttctcgtcctcgtcctcgcaggcc 403 ||||||||||| ||||| ||||| ||||||| |||||| | || || |||||||||||| Sbjct: 3356 cggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgcaggcc 3297
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 344 cggaagtaaaccgagacgagagggatatcgacgtcgttctcgtcctcgtcctcgcaggcc 403 ||||||||||| ||||| ||||| ||||||| |||||| | || || |||||||||||| Sbjct: 29429855 cggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgcaggcc 29429796
>dbj|AK074007.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076H04, full insert sequence Length = 3522 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 344 cggaagtaaaccgagacgagagggatatcgacgtcgttctcgtcctcgtcctcgcaggcc 403 ||||||||||| ||||| ||||| ||||||| |||||| | || || |||||||||||| Sbjct: 3356 cggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgcaggcc 3297
>dbj|AP004333.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0034A04 Length = 151263 Score = 48.1 bits (24), Expect = 0.023 Identities = 51/60 (85%) Strand = Plus / Minus Query: 344 cggaagtaaaccgagacgagagggatatcgacgtcgttctcgtcctcgtcctcgcaggcc 403 ||||||||||| ||||| ||||| ||||||| |||||| | || || |||||||||||| Sbjct: 92777 cggaagtaaactgagacaagaggaatatcgatgtcgtttccatcatcatcctcgcaggcc 92718
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.092 Identities = 26/27 (96%) Strand = Plus / Plus Query: 371 tcgacgtcgttctcgtcctcgtcctcg 397 |||||||||| |||||||||||||||| Sbjct: 4160837 tcgacgtcgtcctcgtcctcgtcctcg 4160863
>gb|AF124045.1| Sorghum bicolor BAC clone 110K5, partial sequence Length = 78195 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 gagaacatcttgaggtaaccatgat 172 |||||||||||||||||| |||||| Sbjct: 59753 gagaacatcttgaggtaatcatgat 59777
>gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete sequence Length = 171772 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 88124 tcgttctcgtcctcgtcctcg 88144
>gb|DQ493954.1| Magnaporthe grisea 70-15 clone 56L15 telomere region, partial sequence Length = 41298 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 34248 tcgttctcgtcctcgtcctcg 34228
>gb|DQ493952.1| Magnaporthe grisea 70-15 clone 41N21 telomere region, partial sequence Length = 43132 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 38090 tcgttctcgtcctcgtcctcg 38070
>gb|DQ493951.1| Magnaporthe grisea 70-15 clone 41H14 telomere region, partial sequence Length = 39091 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 36316 tcgttctcgtcctcgtcctcg 36296
>gb|DQ493948.1| Magnaporthe grisea 70-15 clone 23E18 telomere region, partial sequence Length = 46418 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 39849 tcgttctcgtcctcgtcctcg 39829
>gb|DQ493947.1| Magnaporthe grisea 70-15 clone 21N16 telomere region, partial sequence Length = 36848 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 29107 tcgttctcgtcctcgtcctcg 29087
>gb|DQ493946.1| Magnaporthe grisea 70-15 clone 15L20 telomere region, partial sequence Length = 39538 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 34334 tcgttctcgtcctcgtcctcg 34314
>gb|DQ493945.1| Magnaporthe grisea 70-15 clone 13H23 telomere region, partial sequence Length = 75735 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 63959 tcgttctcgtcctcgtcctcg 63939
>gb|DQ493944.1| Magnaporthe grisea 70-15 clone 01G11 telomere region, partial sequence Length = 40546 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 32822 tcgttctcgtcctcgtcctcg 32802
>gb|DQ493942.1| Magnaporthe grisea 70-15 clone 72A13 telomere region, partial sequence Length = 40639 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 35126 tcgttctcgtcctcgtcctcg 35106
>gb|DQ493941.1| Magnaporthe grisea 70-15 clone 69K09 telomere region, partial sequence Length = 46711 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 36355 tcgttctcgtcctcgtcctcg 36335
>ref|XM_801122.1| Trypanosoma cruzi strain CL Brener nucleosome assembly protein-like protein (Tc00.1047053505983.20) partial mRNA Length = 1368 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 1217 tcgttctcgtcctcgtcctcg 1197
>gb|AY371488.1| Zea mays clone BAC 276N12-123C01, partial sequence Length = 213888 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 148 gagaacatcttgaggtaaccatgat 172 |||||||||||||||||| |||||| Sbjct: 194419 gagaacatcttgaggtaatcatgat 194443
>gb|AC144636.4| Artibeus jamaicensis clone 1A13, complete sequence Length = 114691 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gttttttatcttgctagtttt 288 ||||||||||||||||||||| Sbjct: 3316 gttttttatcttgctagtttt 3296
>gb|AY077623.1| Magnaporthe grisea telomere-linked helicase 1 (TLH1) gene, complete cds Length = 13101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 6504 tcgttctcgtcctcgtcctcg 6484
>gb|DP000001.1| Artibeus jamaicensis target 1 genomic scaffold Length = 584809 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 268 gttttttatcttgctagtttt 288 ||||||||||||||||||||| Sbjct: 327875 gttttttatcttgctagtttt 327855
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 188017 tcgttctcgtcctcgtcctcg 187997
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 103394 tcgttctcgtcctcgtcctcg 103374
>gb|AF123535.1| Zea mays alcohol dehydrogenase 1 (adh1) gene, adh1-F allele, complete cds Length = 160480 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gagaacatcttgaggtaacca 168 ||||||||||||||||||||| Sbjct: 126127 gagaacatcttgaggtaacca 126147
>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete sequence Length = 295132 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 110982 tcgttctcgtcctcgtcctcg 111002
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 27406 tcgttctcgtcctcgtcctcg 27386
>gb|AY691949.1| Zea mays alcohol dehydrogenase 1 (adh1A) gene, complete cds; Fourf copia_LTR and Huck gypsy_LTR retrotransposons, complete sequence; Opie2 copia_LTR retrotransposon Zeon gypsy_LTR and Opie1 copia_LTR retrotransposons, complete sequence; Ji copia_LTR retrotransposon, complete sequence; and unknown protein (adh1B), cyclin H-1 (adh1C), unknown protein (adh1D), hypothetical protein (adh1E), and unknown protein (adh1F) genes, complete cds Length = 126039 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 148 gagaacatcttgaggtaacca 168 ||||||||||||||||||||| Sbjct: 109458 gagaacatcttgaggtaacca 109478
>gb|AC002444.1|AC002444 Drosophila melanogaster (P1 DS02782 (D71)) DNA sequence, complete sequence Length = 80124 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcg 397 ||||||||||||||||||||| Sbjct: 4760 tcgttctcgtcctcgtcctcg 4740
>ref|XM_483012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1120 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 cgtcgttctcgtcctcgtcctcgc 398 |||||| ||||||||||||||||| Sbjct: 707 cgtcgtcctcgtcctcgtcctcgc 684
>gb|AC007578.6| Drosophila melanogaster clone BACR09A11, complete sequence Length = 170684 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tttatctcgaggaccgacta 342 |||||||||||||||||||| Sbjct: 19104 tttatctcgaggaccgacta 19085
>gb|BC055336.1| Mus musculus transketolase, mRNA (cDNA clone MGC:64711 IMAGE:6413263), complete cds Length = 2063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 33 cgttctcgtcctcgtcctcg 52
>ref|NM_009388.2| Mus musculus transketolase (Tkt), mRNA Length = 3207 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 89 cgttctcgtcctcgtcctcg 108
>gb|AC119886.7| Mus musculus chromosome 14, clone RP24-218I13, complete sequence Length = 138803 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 20339 cgttctcgtcctcgtcctcg 20320
>ref|XM_747003.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g07300) partial mRNA Length = 864 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctcgcag 400 ||||| |||||||||||||||||| Sbjct: 701 tcgttgtcgtcctcgtcctcgcag 678
>emb|AL451145.15| Human DNA sequence from clone RP11-164A17 on chromosome 6 Contains the 5' end of the gene for a novel protein similar to S. pombe Rad8 and a CpG island, complete sequence Length = 65811 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 accgatgtgtcctttgttca 83 |||||||||||||||||||| Sbjct: 6474 accgatgtgtcctttgttca 6493
>ref|XM_504014.1| Yarrowia lipolytica CLIB122, YALI0E16280g predicted mRNA Length = 1950 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 377 tcgttctcgtcctcgtcctc 396 |||||||||||||||||||| Sbjct: 1880 tcgttctcgtcctcgtcctc 1861
>gb|AC040933.12| Homo sapiens chromosome 17, clone CTD-2019C10, complete sequence Length = 168585 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gtcctttgttcattcctccc 91 |||||||||||||||||||| Sbjct: 21758 gtcctttgttcattcctccc 21777
>emb|AL109935.39|HSJ1022P6 Human DNA sequence from clone RP5-1022P6 on chromosome 20 Contains the RPS18P1 gene for ribosomal protein S18 pseudogene 1, the gene for a novel protein (KIAA1434), an EIF4E (eukaryotic translation initiation factor 4E) pseudogene, three novel genes and two CpG islands, complete sequence Length = 178601 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 ttttttatcttgctagtttt 288 |||||||||||||||||||| Sbjct: 83570 ttttttatcttgctagtttt 83551
>emb|CR626880.9| Human DNA sequence from clone XX-HCC1954_11K06, complete sequence Length = 151284 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gtcctttgttcattcctccc 91 |||||||||||||||||||| Sbjct: 10789 gtcctttgttcattcctccc 10808
>gb|AC087491.5| Homo sapiens chromosome 17, clone RP11-62N23, complete sequence Length = 157216 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gtcctttgttcattcctccc 91 |||||||||||||||||||| Sbjct: 70556 gtcctttgttcattcctccc 70575
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgatcagcgcgagagcggcg 201 |||||||||||||||||||| Sbjct: 5248087 cgatcagcgcgagagcggcg 5248068
>tpg|BK003497.1| TPA: TPA_inf: Drosophila melanogaster HDC02776 (HDC02776) gene, complete cds Length = 276 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 acgtcgttctcgtcctcgtcctcg 397 ||||||| |||||||||||||||| Sbjct: 113 acgtcgtcctcgtcctcgtcctcg 136
>gb|AF435975.1| Homo sapiens dopamine- and cAMP-regulated neuronal phosphoprotein (PPP1R1B) gene, complete cds, alternatively spliced Length = 34765 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 gtcctttgttcattcctccc 91 |||||||||||||||||||| Sbjct: 25158 gtcctttgttcattcctccc 25177
>dbj|AK140965.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130085N19 product:transketolase, full insert sequence Length = 2098 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 90 cgttctcgtcctcgtcctcg 109
>dbj|AK144146.1| Mus musculus RCB-1283 B16 melanoma cDNA, RIKEN full-length enriched library, clone:G430040M14 product:transketolase, full insert sequence Length = 2068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 61 cgttctcgtcctcgtcctcg 80
>dbj|AK151969.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830044C22 product:transketolase, full insert sequence Length = 2062 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK151916.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830042N04 product:transketolase, full insert sequence Length = 2062 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK146157.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730024K03 product:transketolase, full insert sequence Length = 2067 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>dbj|AK150769.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015D22 product:transketolase, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK150901.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830018A06 product:transketolase, full insert sequence Length = 2066 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>dbj|AK150856.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830016F08 product:transketolase, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK150844.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830015O14 product:transketolase, full insert sequence Length = 2063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK152886.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830089F24 product:transketolase, full insert sequence Length = 2067 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK145677.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0028J21 product:transketolase, full insert sequence Length = 2068 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>dbj|AK152460.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830073F11 product:transketolase, full insert sequence Length = 1701 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 75 cgttctcgtcctcgtcctcg 94
>dbj|AK166763.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0009J01 product:transketolase, full insert sequence Length = 2102 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 93 cgttctcgtcctcgtcctcg 112
>dbj|AK152245.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830057H12 product:transketolase, full insert sequence Length = 2062 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 55 cgttctcgtcctcgtcctcg 74
>dbj|AK150139.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:G530136D09 product:transketolase, full insert sequence Length = 2067 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>dbj|AK159922.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420037O14 product:transketolase, full insert sequence Length = 2067 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>dbj|AK167084.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0029P20 product:transketolase, full insert sequence Length = 2101 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 93 cgttctcgtcctcgtcctcg 112
>gb|AC154646.2| Mus musculus BAC clone RP23-283B12 from chromosome 14, complete sequence Length = 189102 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 131827 cgttctcgtcctcgtcctcg 131808
>dbj|AK002627.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:0610013L23 product:transketolase, full insert sequence Length = 2066 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 59 cgttctcgtcctcgtcctcg 78
>gb|AC092400.1|AC092400 Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39L06, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 374 acgtcgttctcgtcctcgtcctcg 397 ||||||| |||||||||||||||| Sbjct: 55049 acgtcgtcctcgtcctcgtcctcg 55026
>gb|AC092396.1|AC092396 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR21C10, complete sequence Length = 164439 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 acgtcgttctcgtcctcgtcctcg 397 ||||||| |||||||||||||||| Sbjct: 23060 acgtcgtcctcgtcctcgtcctcg 23083
>dbj|AK012794.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810023I22 product:transketolase, full insert sequence Length = 2080 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 61 cgttctcgtcctcgtcctcg 80
>dbj|AK050793.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030020D18 product:transketolase, full insert sequence Length = 3160 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 57 cgttctcgtcctcgtcctcg 76
>dbj|AK086716.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930047D01 product:similar to FUSED SERINE/THREONINE KINASE [Homo sapiens], full insert sequence Length = 3085 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 166 ccatgatatgatagatcgat 185 |||||||||||||||||||| Sbjct: 3077 ccatgatatgatagatcgat 3058
>dbj|AK030446.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330413I19 product:transketolase, full insert sequence Length = 3207 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 89 cgttctcgtcctcgtcctcg 108
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gttctcgtcctcgtcctcgc 398 |||||||||||||||||||| Sbjct: 15572825 gttctcgtcctcgtcctcgc 15572844
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 cgtcgttctcgtcctcgtcctcgc 398 |||||| ||||||||||||||||| Sbjct: 23863034 cgtcgtcctcgtcctcgtcctcgc 23863057
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 atgcgaccaacgagcaaatagctg 125 |||||||| ||||||||||||||| Sbjct: 36339783 atgcgacccacgagcaaatagctg 36339806
>gb|AC008343.4|AC008343 Drosophila melanogaster, chromosome 2R, region 51F-52A, BAC clone BACR03D24, complete sequence Length = 158402 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 87412 cgttctcgtcctcgtcctcg 87393
>dbj|AB175626.1| Trypanosoma sp. Pteromys genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-6 Length = 7852 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 atgatgatgcaaggtttttt 274 |||||||||||||||||||| Sbjct: 2861 atgatgatgcaaggtttttt 2842
>dbj|AB175625.1| Trypanosoma otospermophili genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-6 Length = 7768 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 atgatgatgcaaggtttttt 274 |||||||||||||||||||| Sbjct: 2858 atgatgatgcaaggtttttt 2839
>dbj|AP003251.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0446B05 Length = 149145 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 atgcgaccaacgagcaaatagctg 125 |||||||| ||||||||||||||| Sbjct: 89660 atgcgacccacgagcaaatagctg 89683
>gb|AC144525.3| Homo sapiens BAC clone CTC-833E13 from 2, complete sequence Length = 75381 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 gaagagcaggcctggggatg 311 |||||||||||||||||||| Sbjct: 62683 gaagagcaggcctggggatg 62664
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 375 cgtcgttctcgtcctcgtcctcgc 398 |||||| ||||||||||||||||| Sbjct: 54738 cgtcgtcctcgtcctcgtcctcgc 54761
>dbj|AK178969.1| Mus musculus cDNA, clone:Y0G0108J01, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000022529, based on BLAT search Length = 161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 30 cgttctcgtcctcgtcctcg 49
>dbj|AB190228.1| Trypanosoma otospermophili genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-6 Length = 7823 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 atgatgatgcaaggtttttt 274 |||||||||||||||||||| Sbjct: 2858 atgatgatgcaaggtttttt 2839
>dbj|AP005886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0689B09 Length = 144932 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 gttctcgtcctcgtcctcgc 398 |||||||||||||||||||| Sbjct: 93680 gttctcgtcctcgtcctcgc 93699
>dbj|AK119400.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-E01, full insert sequence Length = 3421 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 atgcgaccaacgagcaaatagctg 125 |||||||| ||||||||||||||| Sbjct: 413 atgcgacccacgagcaaatagctg 436
>dbj|AK099821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A13, full insert sequence Length = 1120 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 375 cgtcgttctcgtcctcgtcctcgc 398 |||||| ||||||||||||||||| Sbjct: 707 cgtcgtcctcgtcctcgtcctcgc 684
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 374 acgtcgttctcgtcctcgtcctcg 397 ||||||| |||||||||||||||| Sbjct: 58821 acgtcgtcctcgtcctcgtcctcg 58844
>gb|AE003825.3| Drosophila melanogaster chromosome 2R, section 25 of 73 of the complete sequence Length = 261690 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tttatctcgaggaccgacta 342 |||||||||||||||||||| Sbjct: 77018 tttatctcgaggaccgacta 77037
>gb|AE003810.3| Drosophila melanogaster chromosome 2R, section 40 of 73 of the complete sequence Length = 271178 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 27664 cgttctcgtcctcgtcctcg 27645
>dbj|AB095943.1| Homo sapiens mRNA for KIAA2023 protein Length = 11657 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 accgatgtgtcctttgttca 83 |||||||||||||||||||| Sbjct: 5176 accgatgtgtcctttgttca 5157
>gb|U90889.1|MMU90889 Mus musculus transketolase (TKT) gene, partial cds Length = 15450 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgttctcgtcctcgtcctcg 397 |||||||||||||||||||| Sbjct: 2245 cgttctcgtcctcgtcctcg 2264
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tcgttctcgtcctcgtcctc 396 |||||||||||||||||||| Sbjct: 1933838 tcgttctcgtcctcgtcctc 1933857
>emb|CR383665.9| Zebrafish DNA sequence from clone DKEY-3G23 in linkage group 14, complete sequence Length = 120923 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 gtcctttgttcattcctccc 91 |||||||||||||||||||| Sbjct: 40723 gtcctttgttcattcctccc 40704 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,207,918 Number of Sequences: 3902068 Number of extensions: 3207918 Number of successful extensions: 59628 Number of sequences better than 10.0: 91 Number of HSP's better than 10.0 without gapping: 91 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 59222 Number of HSP's gapped (non-prelim): 396 length of query: 422 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 400 effective length of database: 17,147,199,772 effective search space: 6858879908800 effective search space used: 6858879908800 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)