Clone Name | rbastl55c03 |
---|---|
Clone Library Name | barley_pub |
>emb|CR390310.1| Gallus gallus finished cDNA, clone ChEST234p17 Length = 1645 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 222 gtatgaaaacagccattcctt 242 ||||||||||||||||||||| Sbjct: 495 gtatgaaaacagccattcctt 475
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 tctcctcagatcgacacctct 317 ||||||||||||||||||||| Sbjct: 23968123 tctcctcagatcgacacctct 23968143 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tctcctcagatcgacacctct 317 ||||||||||||||||||||| Sbjct: 6273780 tctcctcagatcgacacctct 6273760
>dbj|AP004085.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1267_F10 Length = 162669 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 297 tctcctcagatcgacacctct 317 ||||||||||||||||||||| Sbjct: 71167 tctcctcagatcgacacctct 71147
>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1476_F05 Length = 125426 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 tctcctcagatcgacacctct 317 ||||||||||||||||||||| Sbjct: 3161 tctcctcagatcgacacctct 3181
>dbj|AP004881.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0496E03 Length = 138622 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 tctcctcagatcgacacctct 317 ||||||||||||||||||||| Sbjct: 102087 tctcctcagatcgacacctct 102107
>gb|AC101684.13| Mus musculus chromosome 1, clone RP23-187I13, complete sequence Length = 227440 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 354 tgctcacccacatgctcatc 373 |||||||||||||||||||| Sbjct: 100132 tgctcacccacatgctcatc 100113
>gb|AC079171.22| Homo sapiens X BAC RP11-791M20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 340 tatcggtgtccatttgctca 359 |||||||||||||||||||| Sbjct: 144817 tatcggtgtccatttgctca 144836
>emb|BX322614.3| Zebrafish DNA sequence from clone CH211-215G1 in linkage group 16, complete sequence Length = 199783 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aacactgcaaaaactctcca 198 |||||||||||||||||||| Sbjct: 150402 aacactgcaaaaactctcca 150383 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,577,895 Number of Sequences: 3902068 Number of extensions: 3577895 Number of successful extensions: 52621 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52582 Number of HSP's gapped (non-prelim): 39 length of query: 426 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 404 effective length of database: 17,147,199,772 effective search space: 6927468707888 effective search space used: 6927468707888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)