>gb|AC139569.3| Mus musculus BAC clone RP24-340F13 from chromosome 14, complete sequence
          Length = 173736

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 100    agcaaaacaaaaggatgtaaaca 122
              |||||||||||||||||||||||
Sbjct: 122474 agcaaaacaaaaggatgtaaaca 122452

>gb|AC162183.4| Mus musculus BAC clone RP23-27I10 from chromosome 14, complete
            sequence
          Length = 225212

 Score = 46.1 bits (23), Expect = 0.053
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 100  agcaaaacaaaaggatgtaaaca 122
            |||||||||||||||||||||||
Sbjct: 5297 agcaaaacaaaaggatgtaaaca 5275

>gb|AY491010.1| Leishmania major Hut1L protein (Hut1L) gene, complete cds
          Length = 1732

 Score = 42.1 bits (21), Expect = 0.83
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 179 taacgcgcgcggtaccacaca 199
           |||||||||||||||||||||
Sbjct: 675 taacgcgcgcggtaccacaca 655

>gb|AC121797.3| Mus musculus BAC clone RP23-424C23 from chromosome 3, complete sequence
          Length = 177109

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    tgggtacagttctttattgg 51
             ||||||||||||||||||||
Sbjct: 61035 tgggtacagttctttattgg 61016

>gb|AF506853.1| Papaya ringspot virus isolate VNW-38 coat protein (cp) gene,
           partial cds
          Length = 849

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 104 aaacaaaaggatgtaaacaa 123
           ||||||||||||||||||||
Sbjct: 64  aaacaaaaggatgtaaacaa 83

>emb|AL672262.11| Mouse DNA sequence from clone RP23-318G8 on chromosome 11, complete
             sequence
          Length = 101598

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 216   accaaatggctgtaatttag 235
             ||||||||||||||||||||
Sbjct: 78854 accaaatggctgtaatttag 78835

>emb|CR450779.7| Zebrafish DNA sequence from clone CH211-258C22 in linkage group 5,
              complete sequence
          Length = 179980

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    aacaaaattatgcactgaaa 157
              ||||||||||||||||||||
Sbjct: 125048 aacaaaattatgcactgaaa 125029

>dbj|AP007170.1| Aspergillus oryzae RIB40 genomic DNA, SC138
          Length = 504369

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    aggcgatgacgggaacaaaa 144
              ||||||||||||||||||||
Sbjct: 431604 aggcgatgacgggaacaaaa 431623

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 208      gattattcaccaaatggctg 227
                ||||||||||||||||||||
Sbjct: 19193185 gattattcaccaaatggctg 19193166

>emb|BX322651.3| Zebrafish DNA sequence from clone DKEYP-32G10, complete sequence
          Length = 152913

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   aacaaaattatgcactgaaa 157
             ||||||||||||||||||||
Sbjct: 71960 aacaaaattatgcactgaaa 71979

>dbj|AK098921.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N21, full
            insert sequence
          Length = 3612

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  gattattcaccaaatggctg 227
            ||||||||||||||||||||
Sbjct: 3415 gattattcaccaaatggctg 3396

>dbj|AK067777.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116O03, full
            insert sequence
          Length = 3581

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  gattattcaccaaatggctg 227
            ||||||||||||||||||||
Sbjct: 3461 gattattcaccaaatggctg 3442

>dbj|AK060837.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-C11, full
            insert sequence
          Length = 1546

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 208  gattattcaccaaatggctg 227
            ||||||||||||||||||||
Sbjct: 1396 gattattcaccaaatggctg 1377

>emb|AL731599.2|OSJN00244 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0053B21,
              complete sequence
          Length = 151936

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 208    gattattcaccaaatggctg 227
              ||||||||||||||||||||
Sbjct: 126707 gattattcaccaaatggctg 126688


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,903,328
Number of Sequences: 3902068
Number of extensions: 2903328
Number of successful extensions: 44379
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44346
Number of HSP's gapped (non-prelim): 33
length of query: 254
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 232
effective length of database: 17,147,199,772
effective search space: 3978150347104
effective search space used: 3978150347104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)