ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55b06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF031231.1|AF031231 Triticum aestivum S222 (S222) mRNA, compl... 254 2e-64
2ref|XM_466452.1| Oryza sativa (japonica cultivar-group), mRNA 54 3e-04
3ref|XM_506842.1| PREDICTED Oryza sativa (japonica cultivar-group... 54 3e-04
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
5dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic D... 54 3e-04
6dbj|AK100542.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
7dbj|AK100170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
8ref|XM_472836.1| Oryza sativa (japonica cultivar-group), predic... 48 0.018
9emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4,... 48 0.018
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.018
11dbj|AK070339.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
12dbj|AK070336.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.018
13gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome ... 46 0.073
14gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome... 46 0.073
15gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL ... 44 0.29
16gb|BC017066.1| Homo sapiens hypothetical protein MGC12103, mRNA ... 44 0.29
17emb|AJ515158.1|HSA515158 Homo sapiens mRNA for hypothetical prot... 44 0.29
18emb|AJ441110.3|HSA441110 Homo sapiens mRNA for hypothetical prot... 44 0.29
19emb|AJ515429.1|HSA515429 Homo sapiens mRNA for hypothetical prot... 44 0.29
20emb|AJ515428.1|HSA515428 Homo sapiens mRNA for hypothetical prot... 44 0.29
21emb|AJ496322.1|HSA496322 Homo sapiens partial mRNA for hypotheti... 44 0.29
22emb|AJ427339.1|HSA427339 Homo sapiens mRNA for hypothetical prot... 44 0.29
23emb|AL832600.2|HSM803910 Homo sapiens mRNA; cDNA DKFZp451C1217 (... 44 0.29
24gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, comp... 44 0.29
25dbj|AK057437.1| Homo sapiens cDNA FLJ32875 fis, clone TESTI2004031 44 0.29
26ref|NM_130809.2| Homo sapiens hypothetical protein MGC12103 (LOC... 44 0.29
27emb|AL832056.1|HSM803363 Homo sapiens mRNA; cDNA DKFZp313P0510 (... 44 0.29
28emb|AL831963.1|HSM803269 Homo sapiens mRNA; cDNA DKFZp451D162 (f... 44 0.29
29dbj|AK090486.1| Homo sapiens mRNA for FLJ00410 protein 44 0.29
30gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.1
31dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 42 1.1
32emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 42 1.1
33gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.1
34gb|AY842481.1| Homo sapiens growth associated protein 43 (GAP43)... 40 4.5
35gb|AE010334.1| Methanopyrus kandleri AV19 section 33 of 157 of t... 40 4.5
36gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome... 40 4.5
37gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chrom... 40 4.5
38gb|AF024498.1| Caenorhabditis elegans cosmid F40H7, complete seq... 40 4.5
39emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on ch... 40 4.5
40emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on ch... 40 4.5
41gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromo... 40 4.5
42gb|AC182427.3| Pan troglodytes BAC clone CH251-692F19 from chrom... 40 4.5
43gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Canc... 40 4.5
44gb|AC096915.2| Homo sapiens chromosome 3 clone RP11-24H1, comple... 40 4.5
45dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
46gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, comp... 40 4.5
47dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
48emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-5... 40 4.5
49emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chro... 40 4.5
50gb|M58579.1|RABACE Rabbit angiotensin-converting enzyme (ACE-P) ... 40 4.5
51gb|L23202.1|RABANTENIS Rabbit angiotensin-converting isozyme gene 40 4.5 
>gb|AF031231.1|AF031231 Triticum aestivum S222 (S222) mRNA, complete cds
          Length = 1748

 Score =  254 bits (128), Expect = 2e-64
 Identities = 152/160 (95%)
 Strand = Plus / Minus

                                                                        
Query: 181  ggcggcgtgggagggcgccggacctgtggtgttgctcacaggaggaaggggcggctccgc 240
            |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1488 ggcggcgtgggagggcgctggagctgtggtgttgctcacaggaggaaggggcggctccgc 1429

                                                                        
Query: 241  cacgtccgagtccgtcaacaccggcattggggccattgctggtggcaatgctgctttatc 300
            |||||| ||| | ||||||||||||  |||||||||||||||||||||||||||||||||
Sbjct: 1428 cacgtcggagacagtcaacaccggctctggggccattgctggtggcaatgctgctttatc 1369

                                                    
Query: 301  cggtatgaccccaaggaggccgccgcgctggggaggcagc 340
            | ||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 ctgtatgaccccaaggaggccgccgcgctggggaggcagc 1329



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 74/87 (85%), Gaps = 6/87 (6%)
 Strand = Plus / Minus

                                                                        
Query: 2    gaatcatcattcaacctcaacgtccaccacccccaaatacttgtacagccaaaccaaaag 61
            ||||||||||| ||||||||| ||||||| ||||||||      | | ||||| ||||||
Sbjct: 1675 gaatcatcatttaacctcaacatccacca-ccccaaat-----gagacccaaagcaaaag 1622

                                       
Query: 62   gaaaaatgaatcgctcgctacatagaa 88
            |||||| ||||||||||||||||||||
Sbjct: 1621 gaaaaacgaatcgctcgctacatagaa 1595



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 117  ctcagataagcagagaagcgcatagcaccagca 149
            |||||||||||||||||||||||||||| ||||
Sbjct: 1558 ctcagataagcagagaagcgcatagcactagca 1526
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>ref|XM_466452.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2783

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 236  tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
            ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 2383 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 2333



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 127  cagagaagcgcatagcaccagcagc 151
            |||||||||||||||||||||||||
Sbjct: 2501 cagagaagcgcatagcaccagcagc 2477
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>ref|XM_506842.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0046O12.21
            mRNA
          Length = 2827

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 236  tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
            ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 2395 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 2345



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 127  cagagaagcgcatagcaccagcagc 151
            |||||||||||||||||||||||||
Sbjct: 2513 cagagaagcgcatagcaccagcagc 2489
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                   
Query: 236      tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
                ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 22711229 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 22711179



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 127      cagagaagcgcatagcaccagcagc 151
                |||||||||||||||||||||||||
Sbjct: 22711347 cagagaagcgcatagcaccagcagc 22711323
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>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0046O12
          Length = 128223

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                                
Query: 236   tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
             ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 70025 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 69975



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 127   cagagaagcgcatagcaccagcagc 151
             |||||||||||||||||||||||||
Sbjct: 70143 cagagaagcgcatagcaccagcagc 70119
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>dbj|AK100542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102L08, full
            insert sequence
          Length = 2782

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 236  tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
            ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 2382 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 2332



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 127  cagagaagcgcatagcaccagcagc 151
            |||||||||||||||||||||||||
Sbjct: 2500 cagagaagcgcatagcaccagcagc 2476
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>dbj|AK100170.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025E23, full
            insert sequence
          Length = 2824

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 236  tccgccacgtccgagtccgtcaacaccggcattggggccattgctggtggc 286
            ||||| ||||| ||||||||||| |  |||||||| |||||||||||||||
Sbjct: 2392 tccgcgacgtcggagtccgtcaagagaggcattggcgccattgctggtggc 2342



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                     
Query: 127  cagagaagcgcatagcaccagcagc 151
            |||||||||||||||||||||||||
Sbjct: 2510 cagagaagcgcatagcaccagcagc 2486
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>ref|XM_472836.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2223

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 230  ggcggctccgccacgtccgagtccgtca 257
            ||||||||||||||||||||| ||||||
Sbjct: 2111 ggcggctccgccacgtccgagcccgtca 2084
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>emb|AL606447.3|OSJN00011 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0022F23,
             complete sequence
          Length = 130273

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 230   ggcggctccgccacgtccgagtccgtca 257
             ||||||||||||||||||||| ||||||
Sbjct: 28659 ggcggctccgccacgtccgagcccgtca 28632
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                            
Query: 230      ggcggctccgccacgtccgagtccgtca 257
                ||||||||||||||||||||| ||||||
Sbjct: 23585978 ggcggctccgccacgtccgagcccgtca 23585951
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>dbj|AK070339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048K03, full
            insert sequence
          Length = 2493

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 230  ggcggctccgccacgtccgagtccgtca 257
            ||||||||||||||||||||| ||||||
Sbjct: 2229 ggcggctccgccacgtccgagcccgtca 2202
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>dbj|AK070336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047B14, full
            insert sequence
          Length = 1581

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 230  ggcggctccgccacgtccgagtccgtca 257
            ||||||||||||||||||||| ||||||
Sbjct: 1204 ggcggctccgccacgtccgagcccgtca 1177
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>gb|AC164568.1| Mus musculus BAC clone RP23-7A23 from chromosome 14, complete sequence
          Length = 227675

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 95    gcagaaaagaatggtcctcagtc 117
             |||||||||||||||||||||||
Sbjct: 19829 gcagaaaagaatggtcctcagtc 19851
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>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence
          Length = 157658

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 95    gcagaaaagaatggtcctcagtc 117
             |||||||||||||||||||||||
Sbjct: 38640 gcagaaaagaatggtcctcagtc 38618
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>gb|AC005611.1| Homo sapiens chromosome 5, BAC clone 259m9 (LBNL H193), complete
             sequence
          Length = 107190

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   ctcacaggaggaaggggcggct 236
             ||||||||||||||||||||||
Sbjct: 33192 ctcacaggaggaaggggcggct 33171
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>gb|BC017066.1| Homo sapiens hypothetical protein MGC12103, mRNA (cDNA clone
           MGC:9628 IMAGE:3913311), complete cds
          Length = 1702

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 325 ctcacaggaggaaggggcggct 304
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>emb|AJ515158.1|HSA515158 Homo sapiens mRNA for hypothetical protein (ORF1), splice variant 4
          Length = 2750

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AJ441110.3|HSA441110 Homo sapiens mRNA for hypothetical protein, splice variant 1
          Length = 2724

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AJ515429.1|HSA515429 Homo sapiens mRNA for hypothetical protein (ORF1), splice variant 6
          Length = 4732

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AJ515428.1|HSA515428 Homo sapiens mRNA for hypothetical protein (ORF1), splice variant 5
          Length = 4685

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AJ496322.1|HSA496322 Homo sapiens partial mRNA for hypothetical protein, splice variant
           2
          Length = 1189

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AJ427339.1|HSA427339 Homo sapiens mRNA for hypothetical protein, splice variant 3
          Length = 1895

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AL832600.2|HSM803910 Homo sapiens mRNA; cDNA DKFZp451C1217 (from clone DKFZp451C1217)
          Length = 5502

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 347 ctcacaggaggaaggggcggct 326
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>gb|AC010424.9| Homo sapiens chromosome 5 clone CTD-2195M15, complete sequence
          Length = 192282

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 215   ctcacaggaggaaggggcggct 236
             ||||||||||||||||||||||
Sbjct: 93545 ctcacaggaggaaggggcggct 93524
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>dbj|AK057437.1| Homo sapiens cDNA FLJ32875 fis, clone TESTI2004031
          Length = 1687

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 325 ctcacaggaggaaggggcggct 304
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>ref|NM_130809.2| Homo sapiens hypothetical protein MGC12103 (LOC133619), mRNA
          Length = 4732

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 341 ctcacaggaggaaggggcggct 320
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>emb|AL832056.1|HSM803363 Homo sapiens mRNA; cDNA DKFZp313P0510 (from clone DKFZp313P0510)
          Length = 4689

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 351 ctcacaggaggaaggggcggct 330
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>emb|AL831963.1|HSM803269 Homo sapiens mRNA; cDNA DKFZp451D162 (from clone DKFZp451D162);
           complete cds
          Length = 4723

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 350 ctcacaggaggaaggggcggct 329
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>dbj|AK090486.1| Homo sapiens mRNA for FLJ00410 protein
          Length = 4515

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 215 ctcacaggaggaaggggcggct 236
           ||||||||||||||||||||||
Sbjct: 214 ctcacaggaggaaggggcggct 193
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 146   agcagcatcacgccggcgtccgtgc 170
             ||||||||||||||| |||||||||
Sbjct: 94277 agcagcatcacgccgtcgtccgtgc 94301
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 140     agcaccagcagcatcacgccg 160
               |||||||||||||||||||||
Sbjct: 4214913 agcaccagcagcatcacgccg 4214893
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>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 142     caccagcagcatcacgccggc 162
               |||||||||||||||||||||
Sbjct: 1756855 caccagcagcatcacgccggc 1756875
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 144     ccagcagcatcacgccggcgt 164
               |||||||||||||||||||||
Sbjct: 2767004 ccagcagcatcacgccggcgt 2767024
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>gb|AY842481.1| Homo sapiens growth associated protein 43 (GAP43) gene, complete cds
          Length = 100848

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    aaccaaaaggaaaaatgaat 72
             ||||||||||||||||||||
Sbjct: 11075 aaccaaaaggaaaaatgaat 11056
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>gb|AE010334.1| Methanopyrus kandleri AV19 section 33 of 157 of the complete genome
          Length = 7181

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 315  ggaggccgccgcgctgggga 334
            ||||||||||||||||||||
Sbjct: 4547 ggaggccgccgcgctgggga 4528
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>gb|AC132485.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0022D06,
             complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 179   gaggcggcgtgggagggcgc 198
             ||||||||||||||||||||
Sbjct: 78914 gaggcggcgtgggagggcgc 78933
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>gb|AC183547.2| Pan troglodytes BAC clone CH251-213F19 from chromosome 6, complete
             sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaaccaaaaggaaaaatgaa 71
             ||||||||||||||||||||
Sbjct: 53820 aaaccaaaaggaaaaatgaa 53801
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>gb|AF024498.1| Caenorhabditis elegans cosmid F40H7, complete sequence
          Length = 22795

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   caaaccaaaaggaaaaatga 70
            ||||||||||||||||||||
Sbjct: 4284 caaaccaaaaggaaaaatga 4265
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>emb|AL450324.10| Human DNA sequence from clone RP11-307F22 on chromosome 6, complete
             sequence
          Length = 101846

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaaccaaaaggaaaaatgaa 71
             ||||||||||||||||||||
Sbjct: 72119 aaaccaaaaggaaaaatgaa 72100
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>emb|AL354735.14| Human DNA sequence from clone RP11-738I14 on chromosome 9 Contains the 3'
              end of the DDX31 gene for DEAD/H box polypeptide 31, the
              BARHL1 gene for BarH-like 1 (Drosophila) protein, two novel
              genes and three CpG islands, complete sequence
          Length = 189821

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    gcgtgggagggcgccggacc 204
              ||||||||||||||||||||
Sbjct: 104620 gcgtgggagggcgccggacc 104639
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>gb|AC182636.3| Pan troglodytes BAC clone CH251-519F5 from chromosome 6, complete
             sequence
          Length = 197430

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 52    aaaccaaaaggaaaaatgaa 71
             ||||||||||||||||||||
Sbjct: 86415 aaaccaaaaggaaaaatgaa 86396
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>gb|AC182427.3| Pan troglodytes BAC clone CH251-692F19 from chromosome 6, complete
              sequence
          Length = 168190

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 52     aaaccaaaaggaaaaatgaa 71
              ||||||||||||||||||||
Sbjct: 158669 aaaccaaaaggaaaaatgaa 158650
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>gb|AC092468.9| Homo sapiens 3 BAC RP11-326J18 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114428

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    aaccaaaaggaaaaatgaat 72
             ||||||||||||||||||||
Sbjct: 42351 aaccaaaaggaaaaatgaat 42370
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>gb|AC096915.2| Homo sapiens chromosome 3 clone RP11-24H1, complete sequence
          Length = 170162

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 273    ccattgctggtggcaatgctgctt 296
              ||||| ||||||||||||||||||
Sbjct: 108452 ccatttctggtggcaatgctgctt 108429
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 179      gaggcggcgtgggagggcgc 198
                ||||||||||||||||||||
Sbjct: 25344310 gaggcggcgtgggagggcgc 25344329
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>gb|AC099778.2| Homo sapiens chromosome 3 clone RP11-708J19, complete sequence
          Length = 212775

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    acttgtacagccaaaccaaaagga 63
             ||||||||||||||||| ||||||
Sbjct: 84681 acttgtacagccaaacccaaagga 84658
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>dbj|AK062293.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F01, full
            insert sequence
          Length = 2395

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  gaggcggcgtgggagggcgc 198
            ||||||||||||||||||||
Sbjct: 1316 gaggcggcgtgggagggcgc 1335
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>emb|AL139317.5|CNS01DXI Human chromosome 14 DNA sequence BAC R-589M4 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190648

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     tccaccacccccaaatactt 43
              ||||||||||||||||||||
Sbjct: 133014 tccaccacccccaaatactt 133033
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>emb|AL663067.14| Mouse DNA sequence from clone RP23-23G3 on chromosome 2, complete
            sequence
          Length = 193057

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  tggtgttgctcacaggagga 226
            ||||||||||||||||||||
Sbjct: 6173 tggtgttgctcacaggagga 6192
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>gb|M58579.1|RABACE Rabbit angiotensin-converting enzyme (ACE-P) gene, 5' end
          Length = 583

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 217 cacaggaggaaggggcggct 236
           ||||||||||||||||||||
Sbjct: 97  cacaggaggaaggggcggct 116
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>gb|L23202.1|RABANTENIS Rabbit angiotensin-converting isozyme gene
          Length = 1232

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  cacaggaggaaggggcggct 236
            ||||||||||||||||||||
Sbjct: 1008 cacaggaggaaggggcggct 1027


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,218,668
Number of Sequences: 3902068
Number of extensions: 3218668
Number of successful extensions: 66548
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66210
Number of HSP's gapped (non-prelim): 338
length of query: 340
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 318
effective length of database: 17,147,199,772
effective search space: 5452809527496
effective search space used: 5452809527496
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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