>SRA25_CAEEL (O17847) Serpentine receptor class alpha-25 (Protein sra-25)|
          Length = 335

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = +1

Query: 79  AATICIAYHQVYRSFIYTTE 138
           AAT+ I  HQVYRSF+Y ++
Sbjct: 75  AATLEIRIHQVYRSFVYASD 94

>BAT5_MOUSE (Q9Z1Q2) Protein BAT5 (HLA-B-associated transcript 5)|
          Length = 557

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 5/80 (6%)
 Frame = +1

Query: 22  AFNKQASFSYNRRLLSTFPAATICIA-----YHQVYRSFIYTTEHTHHSRHAKQLRAIRY 186
           + +K   FS+    L    A   C+       +  YR FI   E TH ++ A+  R +  
Sbjct: 88  SLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFITILEATHRNQSAENKRQL-- 145

Query: 187 SCRYQAVVAGWPWSWPWQLP 246
              Y      WP  + W+ P
Sbjct: 146 -ANYNFDFRSWPVDFHWEEP 164

>VGLH_SHV21 (P16492) Glycoprotein H precursor|
          Length = 717

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
 Frame = +2

Query: 11  PSSVLSTNKQVSATTAGCFQ--HFQRPQS--VLPIIKCTEAL 124
           P S L   K+++  T G FQ  H +   S  +LPIIKC ++L
Sbjct: 507 PQSSLIAQKEINLGTNGFFQTLHMRHHTSLEILPIIKCIKSL 548

>RUVX_ANASP (Q8YSI5) Putative Holliday junction resolvase (EC 3.1.-.-)|
          Length = 151

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +1

Query: 124 IYTTEHTHHSRHAKQLRAIRYSCRYQAVVAGWPWSWPWQLPFQA 255
           I T E T   R  +Q++ I    + Q +V G P+S    L FQA
Sbjct: 32  ITTVERTSFDRDVQQIQNIVNERQVQVLVVGLPYSMDGSLGFQA 75

>SRA17_CAEEL (O17842) Serpentine receptor class alpha-17 (Protein sra-17)|
          Length = 337

 Score = 27.7 bits (60), Expect = 8.0
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 79  AATICIAYHQVYRSFIYTTE 138
           A T+    HQVYRSF+Y++E
Sbjct: 77  AVTLETRIHQVYRSFVYSSE 96


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,365,083
Number of Sequences: 219361
Number of extensions: 639734
Number of successful extensions: 2140
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2133
length of database: 80,573,946
effective HSP length: 65
effective length of database: 66,315,481
effective search space used: 1591571544
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)