ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55b01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CLUS_PIG (Q29549) Clusterin precursor (Complement cytolysis inhi... 30 1.4
2NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC ... 30 1.9
3NMT_ASPFU (Q9UVX3) Glycylpeptide N-tetradecanoyltransferase (EC ... 29 3.2
4COX2_ORYSA (P04373) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) ... 28 7.1
5FZD7_MOUSE (Q61090) Frizzled 7 precursor (Frizzled-7) (Fz-7) (mFz7) 28 7.1
6FZD7_HUMAN (O75084) Frizzled 7 precursor (Frizzled-7) (Fz-7) (hF... 28 7.1
7NMT_EMENI (Q8TFN1) Glycylpeptide N-tetradecanoyltransferase (EC ... 27 9.2
8MURG_STRPN (Q9ZHA9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 27 9.2

>CLUS_PIG (Q29549) Clusterin precursor (Complement cytolysis inhibitor) (CLI)|
           (CP40) [Contains: Clusterin beta chain; Clusterin alpha
           chain]
          Length = 446

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 8   KFPLNLIPSQKFTNTNYHGFFSMFFE*LFYLQVQITA 118
           +F  N++P   FT+ NYH  F  FF+ +   Q  + A
Sbjct: 224 RFARNIMPFPLFTDLNYHDMFQPFFDMIHQAQQAMDA 260



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>NMT_AJECA (P34763) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 529

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)
 Frame = +1

Query: 43  YKHELPWFLLHVL*MTILPAGTNNSTVLAPNSLLHNTSTP 162
           Y   L W  LH +  + LP G+  S  +  N L  +TSTP
Sbjct: 301 YHRALDWLKLHEVGFSPLPIGSTKSRQVTRNHLPGHTSTP 340



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>NMT_ASPFU (Q9UVX3) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 492

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 43  YKHELPWFLLHVL*MTILPAGTNNSTVLAPNSLLHNTSTP 162
           Y   L W  L+ +  + LPAG+  +  +  N L   TSTP
Sbjct: 264 YHRPLDWLKLYEVGFSPLPAGSTKARQITKNHLPSTTSTP 303



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>COX2_ORYSA (P04373) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 260

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +1

Query: 1   DQEISIKSYTISEVYKHELPWFLLHVL*MTILPAGTNNSTVLAPNSLLHNTSTPYS 168
           +Q ++  SYTI E         LL V    ++PA T+   ++ P  +LH+ + P S
Sbjct: 141 EQSLTFDSYTIPEDDPELGQSRLLEVDNRVVVPAKTHLRMIVTPADVLHSWAVPSS 196



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>FZD7_MOUSE (Q61090) Frizzled 7 precursor (Frizzled-7) (Fz-7) (mFz7)|
          Length = 572

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 127 LIRCCYLYLQVK*SFKEHGEETMVVRVCK 41
           ++  CY Y Q   +F+EH E T +++ CK
Sbjct: 482 IVLACYFYEQ---AFREHWERTWLLQTCK 507



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>FZD7_HUMAN (O75084) Frizzled 7 precursor (Frizzled-7) (Fz-7) (hFz7) (FzE3)|
          Length = 574

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 127 LIRCCYLYLQVK*SFKEHGEETMVVRVCK 41
           ++  CY Y Q   +F+EH E T +++ CK
Sbjct: 484 IVLACYFYEQ---AFREHWERTWLLQTCK 509



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>NMT_EMENI (Q8TFN1) Glycylpeptide N-tetradecanoyltransferase (EC 2.3.1.97)|
           (Peptide N-myristoyltransferase) (Myristoyl-CoA:protein
           N-myristoyltransferase) (NMT)
          Length = 492

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = +1

Query: 43  YKHELPWFLLHVL*MTILPAGTNNSTVLAPNSLLHNTSTP 162
           Y   L W  L+ +  + LP G+  +  +  N L  +TSTP
Sbjct: 264 YHRPLDWLKLYEVGFSPLPRGSTKARQITKNHLPSHTSTP 303



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>MURG_STRPN (Q9ZHA9) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 352

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 301 LQKLLSPPNVDGGWTASYAGNSCG 372
           L  LL P  ++ GW   Y G+ CG
Sbjct: 17  LNLLLMPKFIEDGWEVHYIGDKCG 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,675,231
Number of Sequences: 219361
Number of extensions: 994813
Number of successful extensions: 1967
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1967
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 1407308304
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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