>gb|AY532593.1| Triticum aestivum minichromosomal maintenance factor (MCM2) gene,
            exons 1 through 18 and complete sequence
          Length = 8809

 Score =  212 bits (107), Expect = 4e-52
 Identities = 146/159 (91%)
 Strand = Plus / Minus

                                                                        
Query: 7    aacactgaattatgacatcaagaaggtacaaacatctctaaatgccactggaggcacaag 66
            ||||||||||||||| |||||||||||||| ||||||| ||||||| ||| |||||||||
Sbjct: 8241 aacactgaattatgatatcaagaaggtacagacatctcgaaatgccgctgtaggcacaag 8182

                                                                        
Query: 67   ggtttcagatagcaaacagtacaccaacaccagaattcccgtaaaacagacacgagcagt 126
            ||||||||||||||||||||||||||| | ||||| || |  ||||||||||| ||||||
Sbjct: 8181 ggtttcagatagcaaacagtacaccaatatcagaactctcacaaaacagacacaagcagt 8122

                                                   
Query: 127  cattttgccaacttacactacaagtggacatttctagct 165
            ||||||||| |||||||||||||||||||||||||||||
Sbjct: 8121 cattttgccgacttacactacaagtggacatttctagct 8083



 Score =  127 bits (64), Expect = 2e-26
 Identities = 82/88 (93%)
 Strand = Plus / Minus

                                                                        
Query: 194  gctgaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcat 253
            ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||| |
Sbjct: 8041 gctgatgttgattgagttgttatgctgcaactggatgcctgatgatcccacgcccttcgt 7982

                                        
Query: 254  ccaggacaaagctgttgtcgttgaagtg 281
            ||||||| |||||||||||| |||||||
Sbjct: 7981 ccaggacgaagctgttgtcgctgaagtg 7954



 Score = 46.1 bits (23), Expect = 0.059
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 175  gctcttgaacaaagaggtagctg 197
            |||||||||||||||||||||||
Sbjct: 8085 gctcttgaacaaagaggtagctg 8063

>gb|AY532594.1| Triticum aestivum minichromosomal maintenance factor (MCM2) mRNA,
            complete cds
          Length = 2923

 Score =  113 bits (57), Expect = 3e-22
 Identities = 78/85 (91%)
 Strand = Plus / Minus

                                                                        
Query: 197  gaggttgattgagttgttatgctgctactggatgcttgatgatcccacgcccttcatcca 256
            ||||| |||||||||||||||| || ||||||||| |||||||||||||||||||||| |
Sbjct: 2923 gaggtcgattgagttgttatgccgcaactggatgcctgatgatcccacgcccttcatcga 2864

                                     
Query: 257  ggacaaagctgttgtcgttgaagtg 281
            ||||||||||||||||  |||||||
Sbjct: 2863 ggacaaagctgttgtcactgaagtg 2839

>gb|AY109731.1| Zea mays CL9169_1 mRNA sequence
          Length = 623

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                            
Query: 225 tggatgcttgatgatcccacgcccttcatccag 257
           ||||||| |||||||||||||||||||||||||
Sbjct: 178 tggatgcctgatgatcccacgcccttcatccag 210

>gb|AC102105.8| Mus musculus chromosome 12, clone RP23-89G24, complete sequence
          Length = 188853

 Score = 42.1 bits (21), Expect = 0.93
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 185    aaagaggtagctgaggttgat 205
              |||||||||||||||||||||
Sbjct: 103298 aaagaggtagctgaggttgat 103318

>gb|AC137849.11| Mus musculus chromosome 1, clone RP24-124J24, complete sequence
          Length = 178764

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   cttcatccaggacaaagctg 267
             ||||||||||||||||||||
Sbjct: 21112 cttcatccaggacaaagctg 21093

>gb|AC100531.15| Mus musculus chromosome 1, clone RP23-147I4, complete sequence
          Length = 202351

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   cttcatccaggacaaagctg 267
             ||||||||||||||||||||
Sbjct: 33699 cttcatccaggacaaagctg 33718

>gb|AC142351.1| Pan troglodytes BAC clone RP43-21J15 from 7, complete sequence
          Length = 159635

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     aaacatctctaaatgccact 55
              ||||||||||||||||||||
Sbjct: 104407 aaacatctctaaatgccact 104388

>emb|AL365203.19| Human DNA sequence from clone RP11-479G22 on chromosome 10 Contains the
             3' end of a novel gene (FLJ13031) (FLJ40349), the ITGB1
             gene for integrin beta 1 (fibronectin receptor beta
             polypeptide antigen CD29 includes MDF2 MSK12), an
             adenylate kinase 3 like 1 (AK3L1) pseudogene, a novel
             gene, the 5' end of a novel gene, a NADH dehydrogenase
             subunit 4L (ND4L) pseudogene, a pseudogene similar to part
             of integrin beta 2 (antigen CD18 (p95) lymphocyte
             function-associated antigen 1; macrophage antigen 1
             (mac-1) beta subunit) (ITGB2) and a CpG island, complete
             sequence
          Length = 197973

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ggaggcacaagggtttcaga 75
             ||||||||||||||||||||
Sbjct: 92711 ggaggcacaagggtttcaga 92692

>gb|AC103949.6| Homo sapiens chromosome 18, clone RP11-671P2, complete sequence
          Length = 177301

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 36     aaacatctctaaatgccact 55
              ||||||||||||||||||||
Sbjct: 117250 aaacatctctaaatgccact 117231

>gb|AC026839.7| Homo sapiens chromosome 5, clone RP11-186B13, complete sequence
          Length = 156721

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    aaacatctctaaatgccact 55
             ||||||||||||||||||||
Sbjct: 25257 aaacatctctaaatgccact 25276

>dbj|AP000040.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 11/28, complete
             sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tgctgctactggatgcttga 235
             ||||||||||||||||||||
Sbjct: 14249 tgctgctactggatgcttga 14268

>emb|AL954212.1| Pan troglodytes chromosome 22 clone RP43-043L10 map 22q22.11, complete
             sequence
          Length = 192328

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tgctgctactggatgcttga 235
             ||||||||||||||||||||
Sbjct: 50412 tgctgctactggatgcttga 50431

>dbj|AP001715.1| Homo sapiens genomic DNA, chromosome 21q, section 59/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 216    tgctgctactggatgcttga 235
              ||||||||||||||||||||
Sbjct: 179399 tgctgctactggatgcttga 179418

>dbj|AB056778.1| Macaca fascicularis brain cDNA clone:QccE-21094, full insert
           sequence
          Length = 1550

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 181 gaacaaagaggtagctgagg 200
           ||||||||||||||||||||
Sbjct: 727 gaacaaagaggtagctgagg 746

>dbj|AP000281.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:T1588, complete sequence
          Length = 66129

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tgctgctactggatgcttga 235
             ||||||||||||||||||||
Sbjct: 58308 tgctgctactggatgcttga 58327

>dbj|AP000184.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 11/21, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tgctgctactggatgcttga 235
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244

>dbj|AP000108.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,
             Q78C10-149C3 region, segment 11/20
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 216   tgctgctactggatgcttga 235
             ||||||||||||||||||||
Sbjct: 20225 tgctgctactggatgcttga 20244


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,225,189
Number of Sequences: 3902068
Number of extensions: 2225189
Number of successful extensions: 44627
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44603
Number of HSP's gapped (non-prelim): 24
length of query: 281
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 259
effective length of database: 17,147,199,772
effective search space: 4441124740948
effective search space used: 4441124740948
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)