ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor is... 293 2e-76
2gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor i... 287 1e-74
3emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 92 1e-15
4dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
5dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
6dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clon... 92 1e-15
7emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 92 1e-15
8emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for pu... 50 0.004
9emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for pu... 50 0.004
10emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5... 44 0.26
11emb|BX890614.10| Zebrafish DNA sequence from clone DKEY-46N5, co... 44 0.26
12emb|AL935272.17| Zebrafish DNA sequence from clone CH211-266K22,... 44 0.26
13gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete seq... 42 1.0
14gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete s... 42 1.0
15gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete se... 42 1.0
16gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete s... 42 1.0
17gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete seq... 42 1.0
18gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete s... 42 1.0
19emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 ... 42 1.0
20emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chr... 42 1.0
21gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, compl... 42 1.0
22gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N... 42 1.0
23dbj|BS000076.1| Pan troglodytes chromosome 22 clone:PTB-096O09, ... 42 1.0
24dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07,... 42 1.0
25emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic tr... 42 1.0
26emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e... 42 1.0
27dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.0
28dbj|AP000705.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 42 1.0
29gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence 40 4.1
30gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosom... 40 4.1
31ref|NM_182551.3| Homo sapiens lysocardiolipin acyltransferase (L... 40 4.1
32ref|NM_001002257.1| Homo sapiens lysocardiolipin acyltransferase... 40 4.1
33gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome... 40 4.1
34gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome... 40 4.1
35gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's ... 40 4.1
36emb|AL590428.7| Human DNA sequence from clone RP11-553A21 on chr... 40 4.1
37emb|AL359380.16| Human DNA sequence from clone RP11-642N5 on chr... 40 4.1
38gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's... 40 4.1
39emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chr... 40 4.1
40emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo... 40 4.1
41emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in... 40 4.1
42emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in... 40 4.1
43emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 ... 40 4.1
44dbj|AK023269.1| Homo sapiens cDNA FLJ13207 fis, clone NT2RP4000023 40 4.1
45gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, co... 40 4.1
46gb|AF410460.1| Homo sapiens CD109 (CD109) gene, CD109-a allele, ... 40 4.1
47gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, comple... 40 4.1
48dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 4.1
49gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complet... 40 4.1
50dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome 40 4.1
51emb|BX647953.1|HSM808099 Homo sapiens mRNA; cDNA DKFZp686I0651 (... 40 4.1
52emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chro... 40 4.1
53emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, ... 40 4.1
54emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in ... 40 4.1
55emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in ... 40 4.1
56gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, comple... 40 4.1
57emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 i... 40 4.1
58emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in ... 40 4.1
59gb|AY110434.1| Zea mays CL533_2 mRNA sequence 40 4.1
60emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-9... 40 4.1
61gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete... 40 4.1
62emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 40 4.1
63emb|BX537607.1|HSM806326 Homo sapiens mRNA; cDNA DKFZp686N20218 ... 40 4.1
64gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, compl... 40 4.1 
>gb|M95746.1|WHTSTPCDN Wheat (clone p80k-16) initiation factor isozyme 4F p82 subunit mRNA
            sequence
          Length = 2863

 Score =  293 bits (148), Expect = 2e-76
 Identities = 157/160 (98%)
 Strand = Plus / Minus

                                                                        
Query: 10   aagccaaaataatcttaaattcagttttcgactcctacaatgctgacacgatatattgta 69
            |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2863 aagccaaaatgatcttagattcagttttcgactcctacaatgctgacacgatatattgta 2804

                                                                        
Query: 70   accgacagaatactccaaaaccacagtacattgttacaaattgggtaagaactgaaaaga 129
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2803 accgacagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaaga 2744

                                                    
Query: 130  aataataacattggaggagacacaaaaacatcccatttga 169
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2743 aataataacattggaggagacacaaaaacatcccatttga 2704



 Score =  180 bits (91), Expect = 2e-42
 Identities = 117/123 (95%), Gaps = 2/123 (1%)
 Strand = Plus / Minus

                                                                        
Query: 189  gccttgttcattcccaggctccagcaagagttaggccgccgtcgcc-gagagaccaaaat 247
            |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct: 2693 gccttgttcattcccaggctccagcaagagttaggccgccgtcgccagagagaccaaa-t 2635

                                                                        
Query: 248  ccatggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatat 307
            |||||||||||| || ||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 2634 ccatggcttctttctgtcctcgaaacaataatcaacactcatgtgacctcgcaaaaatat 2575

               
Query: 308  aca 310
            |||
Sbjct: 2574 aca 2572
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>gb|M95747.1|WHTIF4F82B Wheat (clone p80k-34) initiation factor isozyme 4F p82 subunit mRNA,
            complete cds
          Length = 2887

 Score =  287 bits (145), Expect = 1e-74
 Identities = 151/153 (98%)
 Strand = Plus / Minus

                                                                        
Query: 15   aaaataatcttaaattcagttttcgactcctacaatgctgacacgatatattgtaaccga 74
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2862 aaaataatcttagattcagttttcgactcctacaatgctgacacgatatattgtaaccga 2803

                                                                        
Query: 75   cagaatactccaaaaccacagtacattgttacaaattgggtaagaactgaaaagaaataa 134
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2802 cagaatactccaaaaccacagtacattgttacaaattgtgtaagaactgaaaagaaataa 2743

                                             
Query: 135  taacattggaggagacacaaaaacatcccattt 167
            |||||||||||||||||||||||||||||||||
Sbjct: 2742 taacattggaggagacacaaaaacatcccattt 2710



 Score =  218 bits (110), Expect = 8e-54
 Identities = 119/122 (97%)
 Strand = Plus / Minus

                                                                        
Query: 189  gccttgttcattcccaggctccagcaagagttaggccgccgtcgccgagagaccaaaatc 248
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 2696 gccttgttcattcccaggctccagcgagagttaggccgccgtcgccgagagaccaaaatc 2637

                                                                        
Query: 249  catggcttcttcctttcctccaaacaataatcaacactcatgtaacctcgcaaaaatata 308
            |||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 2636 catggcttcttcctttcctcgaaacaataatcaacactcatgtgacctcgcaaaaatata 2577

              
Query: 309  ca 310
            ||
Sbjct: 2576 ca 2575
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>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 53    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 111
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 42105 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 42164

                                       
Query: 112   gggtaagaactgaaaagaaataataa 137
             | ||| | || |||||||| ||||||
Sbjct: 42165 gtgtacgcacagaaaagaactaataa 42190



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 63/76 (82%), Gaps = 7/76 (9%)
 Strand = Plus / Plus

                                                                         
Query: 242   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 294
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 42261 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 42320

                             
Query: 295   ctcgcaaaaatataca 310
             || |||||||||||||
Sbjct: 42321 cttgcaaaaatataca 42336
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                            
Query: 53       tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 111
                |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 24921520 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 24921579

                                          
Query: 112      gggtaagaactgaaaagaaataataa 137
                | ||| | || |||||||| ||||||
Sbjct: 24921580 gtgtacgcacagaaaagaactaataa 24921605



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 63/76 (82%), Gaps = 7/76 (9%)
 Strand = Plus / Plus

                                                                            
Query: 242      caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 294
                |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 24921676 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 24921735

                                
Query: 295      ctcgcaaaaatataca 310
                || |||||||||||||
Sbjct: 24921736 cttgcaaaaatataca 24921751
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>dbj|AK065553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027N14, full
            insert sequence
          Length = 2907

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 53   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 111
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 2795 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 2736

                                      
Query: 112  gggtaagaactgaaaagaaataataa 137
            | ||| | || |||||||| ||||||
Sbjct: 2735 gtgtacgcacagaaaagaactaataa 2710



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 63/76 (82%), Gaps = 7/76 (9%)
 Strand = Plus / Minus

                                                                        
Query: 242  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 294
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 2639 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 2580

                            
Query: 295  ctcgcaaaaatataca 310
            || |||||||||||||
Sbjct: 2579 cttgcaaaaatataca 2564
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>dbj|AK060761.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A02, full
            insert sequence
          Length = 1712

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Minus

                                                                        
Query: 53   tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 111
            |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 1701 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 1642

                                      
Query: 112  gggtaagaactgaaaagaaataataa 137
            | ||| | || |||||||| ||||||
Sbjct: 1641 gtgtacgcacagaaaagaactaataa 1616



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 63/76 (82%), Gaps = 7/76 (9%)
 Strand = Plus / Minus

                                                                        
Query: 242  caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 294
            |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 1545 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 1486

                            
Query: 295  ctcgcaaaaatataca 310
            || |||||||||||||
Sbjct: 1485 cttgcaaaaatataca 1470
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>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 77/86 (89%), Gaps = 1/86 (1%)
 Strand = Plus / Plus

                                                                         
Query: 53    tgacacgatatattgtaa-ccgacagaatactccaaaaccacagtacattgttacaaatt 111
             |||||||||||||||||| || ||||||||||||||||||| |||||||||||||||| |
Sbjct: 49634 tgacacgatatattgtaaaccaacagaatactccaaaaccatagtacattgttacaaaat 49693

                                       
Query: 112   gggtaagaactgaaaagaaataataa 137
             | ||| | || |||||||| ||||||
Sbjct: 49694 gtgtacgcacagaaaagaactaataa 49719



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 63/76 (82%), Gaps = 7/76 (9%)
 Strand = Plus / Plus

                                                                         
Query: 242   caaaatccatggcttcttcctttcctcc-------aaacaataatcaacactcatgtaac 294
             |||||||||||||||||| ||||||| |       |||||||||| ||||||||| | ||
Sbjct: 49790 caaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgac 49849

                             
Query: 295   ctcgcaaaaatataca 310
             || |||||||||||||
Sbjct: 49850 cttgcaaaaatataca 49865
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>emb|AM156958.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar Gigante
          Length = 2599

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 270  aaacaataatcaacactcatgtaacctcgcaaaaatataca 310
            |||||||||| ||||||||| | |||| |||||||||||||
Sbjct: 2572 aaacaataatgaacactcatctgaccttgcaaaaatataca 2532
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>emb|AM156957.1| Oryza sativa (indica cultivar-group) mRNA for putative eukaryotic
            translation initiation factor 4 gamma (eif(iso)4g gene),
            cultivar IR64
          Length = 2599

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 62/75 (82%), Gaps = 7/75 (9%)
 Strand = Plus / Minus

                                                                        
Query: 243  aaaatccatggcttcttcctttcc-------tccaaacaataatcaacactcatgtaacc 295
            ||||||||||||||||| ||||||       || |||||||||| ||||||||| | |||
Sbjct: 2599 aaaatccatggcttctttctttccttcgttgtcgaaacaataatgaacactcatctgacc 2540

                           
Query: 296  tcgcaaaaatataca 310
            | |||||||||||||
Sbjct: 2539 ttgcaaaaatataca 2525
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>emb|Z69724.1|HSU85B5 Human DNA sequence from clone LL0XNC01-85B5 on chromosome X, complete
            sequence
          Length = 39550

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 116  aagaactgaaaagaaataataacatt 141
            |||| |||||||||||||||||||||
Sbjct: 3229 aagagctgaaaagaaataataacatt 3204
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>emb|BX890614.10| Zebrafish DNA sequence from clone DKEY-46N5, complete sequence
          Length = 115990

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 3      cagaaataagccaaaataatct 24
              ||||||||||||||||||||||
Sbjct: 115721 cagaaataagccaaaataatct 115742
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>emb|AL935272.17| Zebrafish DNA sequence from clone CH211-266K22, complete sequence
          Length = 145553

 Score = 44.1 bits (22), Expect = 0.26
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 3     cagaaataagccaaaataatct 24
             ||||||||||||||||||||||
Sbjct: 93717 cagaaataagccaaaataatct 93738
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>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence
          Length = 131049

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 15     aaaataatcttaaattcagtt 35
              |||||||||||||||||||||
Sbjct: 100850 aaaataatcttaaattcagtt 100830
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>gb|AC174297.11| Medicago truncatula clone mth2-73p24, complete sequence
          Length = 115210

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 48268 aaaataatcttaaattcagtt 48248
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>gb|AC144540.7| Medicago truncatula clone mth2-19p16, complete sequence
          Length = 78737

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 25465 aaaataatcttaaattcagtt 25445
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>gb|AC146745.20| Medicago truncatula clone mth2-53p19, complete sequence
          Length = 121952

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 34894 aaaataatcttaaattcagtt 34914
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>gb|AC144657.6| Medicago truncatula clone mth2-16a6, complete sequence
          Length = 92738

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 85376 aaaataatcttaaattcagtt 85396
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>gb|AC140722.11| Medicago truncatula clone mth2-14e20, complete sequence
          Length = 97982

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 42222 aaaataatcttaaattcagtt 42202
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>emb|BX927394.14| Zebrafish DNA sequence from clone CH211-262I10 in linkage group 21,
              complete sequence
          Length = 164899

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 44     ctacaatgctgacacgatatattgt 68
              |||||||||||| ||||||||||||
Sbjct: 122731 ctacaatgctgaaacgatatattgt 122707
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>emb|AL157361.6| Human DNA sequence from clone RP11-132L12 on chromosome 13q21.33-22.3
             Contains a signal sequence receptor, alpha
             (translocon-associated protein alpha) (SSR1) pseudogene,
             complete sequence
          Length = 151603

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   tcccaggctccagcaagagtt 220
             |||||||||||||||||||||
Sbjct: 87107 tcccaggctccagcaagagtt 87087
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>gb|AC026415.4| Homo sapiens chromosome 5 clone CTD-2046I8, complete sequence
          Length = 67124

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 200  tcccaggctccagcaagagtt 220
            |||||||||||||||||||||
Sbjct: 3598 tcccaggctccagcaagagtt 3618
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>gb|AC022127.4|AC022127 Homo sapiens chromosome 5 clone CTD-2151N11, complete sequence
          Length = 83029

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 200   tcccaggctccagcaagagtt 220
             |||||||||||||||||||||
Sbjct: 34025 tcccaggctccagcaagagtt 34005
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>dbj|BS000076.1| Pan troglodytes chromosome 22 clone:PTB-096O09, map 22, complete
              sequences
          Length = 186284

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      cagaaataagccaaaataatc 23
              |||||||||||||||||||||
Sbjct: 181105 cagaaataagccaaaataatc 181125
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>dbj|BS000077.1| Pan troglodytes chromosome 22 clone:RP43-076N07, map 22, complete
             sequences
          Length = 186185

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     cagaaataagccaaaataatc 23
             |||||||||||||||||||||
Sbjct: 32240 cagaaataagccaaaataatc 32260
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>emb|AM156959.1| Oryza glaberrima mRNA for putative eukaryotic translation initiation
            factor 4 gamma (eif(iso)4g gene), cultivar Tog5681
          Length = 2699

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 270  aaacaataatcaacactcatgtaacctcgcaaaaatataca 310
            |||||||||  ||||||||| | |||| |||||||||||||
Sbjct: 2666 aaacaataacgaacactcatctgaccttgcaaaaatataca 2626



 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 244  aaatccatggcttcttcctttcct 267
            |||||||||||||||| |||||||
Sbjct: 2699 aaatccatggcttctttctttcct 2676
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>emb|CT033770.2| Medicago truncatula chromosome 5 clone mth2-176e1, COMPLETE SEQUENCE
          Length = 138194

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    aaaataatcttaaattcagtt 35
             |||||||||||||||||||||
Sbjct: 84861 aaaataatcttaaattcagtt 84841
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>dbj|AP001683.1| Homo sapiens genomic DNA, chromosome 21q, section 27/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 3      cagaaataagccaaaataatc 23
              |||||||||||||||||||||
Sbjct: 248515 cagaaataagccaaaataatc 248535
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>dbj|AP000705.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B745D19,
             LL56-APP region, complete sequence
          Length = 145869

 Score = 42.1 bits (21), Expect = 1.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     cagaaataagccaaaataatc 23
             |||||||||||||||||||||
Sbjct: 9989  cagaaataagccaaaataatc 10009
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>gb|BT016928.1| Zea mays clone E04912703C02.c mRNA sequence
          Length = 249

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 243 aaaatccatggcttcttcctttcc 266
           ||||||||||||||||| ||||||
Sbjct: 74  aaaatccatggcttctttctttcc 97
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>gb|AC140845.2| Mus musculus BAC clone RP24-386C13 from chromosome 8, complete sequence
          Length = 153426

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   gaaaagaaataataacattg 142
             ||||||||||||||||||||
Sbjct: 39323 gaaaagaaataataacattg 39342
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>ref|NM_182551.3| Homo sapiens lysocardiolipin acyltransferase (LYCAT), transcript
            variant 1, mRNA
          Length = 5077

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    gaaataagccaaaataatcttaaa 28
            ||||||||||||||||||| ||||
Sbjct: 4221 gaaataagccaaaataatcctaaa 4244
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>ref|NM_001002257.1| Homo sapiens lysocardiolipin acyltransferase (LYCAT), transcript
            variant 2, mRNA
          Length = 4872

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    gaaataagccaaaataatcttaaa 28
            ||||||||||||||||||| ||||
Sbjct: 4016 gaaataagccaaaataatcctaaa 4039
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>gb|AC123554.3| Mus musculus BAC clone RP23-135A9 from chromosome 13, complete sequence
          Length = 205869

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 248   ccatggcttcttcctttcct 267
             ||||||||||||||||||||
Sbjct: 31484 ccatggcttcttcctttcct 31503
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>gb|AC124740.4| Mus musculus BAC clone RP23-356M1 from chromosome 18, complete sequence
          Length = 190023

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 201   cccaggctccagcaagagtt 220
             ||||||||||||||||||||
Sbjct: 97827 cccaggctccagcaagagtt 97808
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>gb|AC128952.4| Rattus norvegicus 14 BAC CH230-510F9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 170859

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tgaaaagaaataataacatt 141
             ||||||||||||||||||||
Sbjct: 30825 tgaaaagaaataataacatt 30844
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>emb|AL590428.7| Human DNA sequence from clone RP11-553A21 on chromosome 6 Contains the 5'
              end of the SLC17A5 gene for solute carrier family 17
              (anion/sugar transporter), member 5, the 5' end of the gene
              for CD109 (CD109) and three CpG islands, complete sequence
          Length = 163577

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      gaaataagccaaaataatct 24
              ||||||||||||||||||||
Sbjct: 133858 gaaataagccaaaataatct 133839
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>emb|AL359380.16| Human DNA sequence from clone RP11-642N5 on chromosome 6 Contains the
             3' end of a novel gene and the 5' end of the TINAG gene
             for tubulointerstitial nephritis antigen, complete
             sequence
          Length = 188826

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     gaaataagccaaaataatcttaaa 28
             ||||||||||||||||||| ||||
Sbjct: 52371 gaaataagccaaaataatcctaaa 52394
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>gb|AC099101.7| Rattus norvegicus 14 BAC CH230-186B23 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 211584

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   tgaaaagaaataataacatt 141
             ||||||||||||||||||||
Sbjct: 41625 tgaaaagaaataataacatt 41606
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>emb|AL589738.6| Mouse DNA sequence from clone RP23-322J11 on chromosome 13 Contains the
             Foxq1 gene for forkhead box Q1 (Hfh1l), two novel genes
             and two CpG islands, complete sequence
          Length = 187709

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 195   ttcattcccaggctccagca 214
             ||||||||||||||||||||
Sbjct: 35935 ttcattcccaggctccagca 35916
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>emb|AJ400899.1|PSA400899 Pisum sativum partial kdsA gene for Kdo-8-phosphate synthase, exons
           1-4
          Length = 1812

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 taagaactgaaaagaaataa 134
           ||||||||||||||||||||
Sbjct: 639 taagaactgaaaagaaataa 620
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>emb|CR855858.5| Zebrafish DNA sequence from clone CH211-113H5 in linkage group 24,
             complete sequence
          Length = 152666

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    atgctgacacgatatattgt 68
             ||||||||||||||||||||
Sbjct: 54458 atgctgacacgatatattgt 54439
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>emb|BX901883.5| Zebrafish DNA sequence from clone DKEY-151M15 in linkage group 3,
              complete sequence
          Length = 241961

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     atgctgacacgatatattgt 68
              ||||||||||||||||||||
Sbjct: 198757 atgctgacacgatatattgt 198776
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>emb|BX927134.11| Zebrafish DNA sequence from clone CH211-261C20 in linkage group 20,
             complete sequence
          Length = 86384

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   tgaaaagaaataataacatt 141
             ||||||||||||||||||||
Sbjct: 84744 tgaaaagaaataataacatt 84763
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>dbj|AK023269.1| Homo sapiens cDNA FLJ13207 fis, clone NT2RP4000023
          Length = 2633

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    gaaataagccaaaataatcttaaa 28
            ||||||||||||||||||| ||||
Sbjct: 1797 gaaataagccaaaataatcctaaa 1820
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>gb|AC008158.16| Homo sapiens chromosome 17, clone RP11-42F20, complete sequence
          Length = 148110

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 192   ttgttcattcccaggctcca 211
             ||||||||||||||||||||
Sbjct: 70836 ttgttcattcccaggctcca 70817
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>gb|AF410460.1| Homo sapiens CD109 (CD109) gene, CD109-a allele, exon 19 and
           partial cds
          Length = 2608

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   gaaataagccaaaataatct 24
           ||||||||||||||||||||
Sbjct: 897 gaaataagccaaaataatct 878
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>gb|AC008650.8| Homo sapiens chromosome 5 clone CTB-186M2, complete sequence
          Length = 139226

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    aagccaaaataatcttaaat 29
             ||||||||||||||||||||
Sbjct: 28464 aagccaaaataatcttaaat 28483
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>dbj|AK038355.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130097D18
           product:unclassifiable, full insert sequence
          Length = 719

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 201 cccaggctccagcaagagtt 220
           ||||||||||||||||||||
Sbjct: 28  cccaggctccagcaagagtt 9
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>gb|AC132154.3| Homo sapiens BAC clone RP11-523J2 from 2, complete sequence
          Length = 120590

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     gaaataagccaaaataatcttaaa 28
             ||||||||||||||||||| ||||
Sbjct: 74280 gaaataagccaaaataatcctaaa 74303
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>dbj|AP006628.1| Onion yellows phytoplasma OY-M DNA, complete genome
          Length = 860631

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 115    taagaactgaaaagaaataataac 138
              |||||||| |||||||||||||||
Sbjct: 183747 taagaacttaaaagaaataataac 183724
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>emb|BX647953.1|HSM808099 Homo sapiens mRNA; cDNA DKFZp686I0651 (from clone DKFZp686I0651)
          Length = 4885

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 5    gaaataagccaaaataatcttaaa 28
            ||||||||||||||||||| ||||
Sbjct: 4028 gaaataagccaaaataatcctaaa 4051
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>emb|AL773512.6| Mouse DNA sequence from clone RP23-454N6 on chromosome 2, complete
             sequence
          Length = 159731

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   gaaaagaaataataacattg 142
             ||||||||||||||||||||
Sbjct: 65829 gaaaagaaataataacattg 65810
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>emb|AL935194.4| Zebrafish DNA sequence from clone CH211-237E12, complete sequence
          Length = 145569

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    atgctgacacgatatattgt 68
             ||||||||||||||||||||
Sbjct: 50947 atgctgacacgatatattgt 50928
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>emb|BX248390.7| Zebrafish DNA sequence from clone DKEY-34F16 in linkage group 20,
             complete sequence
          Length = 239874

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    atgctgacacgatatattgt 68
             ||||||||||||||||||||
Sbjct: 46843 atgctgacacgatatattgt 46824
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>emb|CR751546.4| Zebrafish DNA sequence from clone CH211-53M6 in linkage group 20,
           complete sequence
          Length = 9831

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 122 tgaaaagaaataataacatt 141
           ||||||||||||||||||||
Sbjct: 360 tgaaaagaaataataacatt 379
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>gb|AC123027.4| Mus musculus BAC clone RP24-550H11 from 3, complete sequence
          Length = 191211

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      aaataagccaaaataatcttaaat 29
              |||||||| |||||||||||||||
Sbjct: 121433 aaataagcaaaaataatcttaaat 121410
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>emb|BX640497.11| Zebrafish DNA sequence from clone CH211-108O9 in linkage group 20,
             complete sequence
          Length = 189717

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    atgctgacacgatatattgt 68
             ||||||||||||||||||||
Sbjct: 78894 atgctgacacgatatattgt 78875
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>emb|BX470128.8| Zebrafish DNA sequence from clone DKEY-19F21 in linkage group 20,
             complete sequence
          Length = 209360

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 49    atgctgacacgatatattgt 68
             ||||||||||||||||||||
Sbjct: 38990 atgctgacacgatatattgt 38971
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>gb|AY110434.1| Zea mays CL533_2 mRNA sequence
          Length = 843

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 243 aaaatccatggcttcttcctttcc 266
           ||||||||||||||||| ||||||
Sbjct: 672 aaaatccatggcttctttctttcc 649
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>emb|AL161752.4|CNS01RHH Human chromosome 14 DNA sequence BAC R-99L13 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 178433

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 135   taacattggaggagacacaaaaac 158
             ||||||||||||||||||| ||||
Sbjct: 93093 taacattggaggagacacataaac 93116
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>gb|AC153487.1| Taeniopygia guttata clone TG__Ba0319A15, complete sequence
          Length = 136080

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 199   ttcccaggctccagcaagag 218
             ||||||||||||||||||||
Sbjct: 42008 ttcccaggctccagcaagag 41989
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
              complete sequence
          Length = 184073

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     atgctgacacgatatattgt 68
              ||||||||||||||||||||
Sbjct: 135077 atgctgacacgatatattgt 135096
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>emb|BX537607.1|HSM806326 Homo sapiens mRNA; cDNA DKFZp686N20218 (from clone DKFZp686N20218)
          Length = 1529

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 5   gaaataagccaaaataatcttaaa 28
           ||||||||||||||||||| ||||
Sbjct: 671 gaaataagccaaaataatcctaaa 694
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>gb|AC117544.8| Mus musculus chromosome 8, clone RP23-99L5, complete sequence
          Length = 179585

 Score = 40.1 bits (20), Expect = 4.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 123  gaaaagaaataataacattg 142
            ||||||||||||||||||||
Sbjct: 7379 gaaaagaaataataacattg 7360


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,775,360
Number of Sequences: 3902068
Number of extensions: 3775360
Number of successful extensions: 87135
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86964
Number of HSP's gapped (non-prelim): 165
length of query: 310
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 288
effective length of database: 17,147,199,772
effective search space: 4938393534336
effective search space used: 4938393534336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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