ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TMOE_PSEME (Q00460) Toluene-4-monooxygenase system protein E (EC... 28 6.1
2ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disint... 28 7.9

>TMOE_PSEME (Q00460) Toluene-4-monooxygenase system protein E (EC 1.14.13.-)|
          Length = 326

 Score = 28.1 bits (61), Expect = 6.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +1

Query: 10  TICPLLINETIVQKSQHSRWKQQLCQSGLSS 102
           T+ PLLI+  +    +HSRW + L +  L +
Sbjct: 244 TLLPLLIDSQLKDAERHSRWSKALVKHALEN 274



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>ATS20_HUMAN (P59510) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 20)
           (ADAM-TS 20) (ADAM-TS20)
          Length = 1911

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
 Frame = -2

Query: 254 EMGVQGPRMVMMVDGSGN*SAQTSYGQNSCSRS---------CVDELYDEDLHY 120
           E+ VQG R V+   GS N   +     NS +R          CV  LY+ D+HY
Sbjct: 786 EINVQGTRTVIEYSGSNNAVERI----NSTNRQEKELILQVLCVGNLYNPDVHY 835


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,948,930
Number of Sequences: 219361
Number of extensions: 625932
Number of successful extensions: 1214
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1214
length of database: 80,573,946
effective HSP length: 67
effective length of database: 65,876,759
effective search space used: 1581042216
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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