>emb|X70054.1|CCOPABOXB C.capitata opa box DNA
          Length = 332

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 151 caatcaactcaacagcaacatcat 174
           ||||||||||||||||||||||||
Sbjct: 83  caatcaactcaacagcaacatcat 106

>ref|NM_184828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2592

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 287  tgtccatcactaaacaccttcacgtagcagagtgttcctccagcttcatccgcaaacgtt 346
            ||||||||| |||||| ||| || |  |||||  ||||||||| |||||| ||||| |||
Sbjct: 2558 tgtccatcagtaaacatcttaacatgacagagctttcctccagtttcatcggcaaatgtt 2499

                                                           
Query: 347  atcttcctacgtttcctcggcacttgtggatgcggaacagccttctt 393
            |||||| | ||||| || || ||||  | ||| | ||||||||||||
Sbjct: 2498 atcttctttcgttttcttggaacttcagaatgagaaacagccttctt 2452

>gb|AC120537.6| Oryza sativa chromosome 3 BAC OSJNBb0042N11 genomic sequence, complete
             sequence
          Length = 127210

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                         
Query: 287   tgtccatcactaaacaccttcacgtagcagagtgttcctccagcttcatccgcaaacgtt 346
             ||||||||| |||||| ||| || |  |||||  ||||||||| |||||| ||||| |||
Sbjct: 90312 tgtccatcagtaaacatcttaacatgacagagctttcctccagtttcatcggcaaatgtt 90253

                                                            
Query: 347   atcttcctacgtttcctcggcacttgtggatgcggaacagccttctt 393
             |||||| | ||||| || || ||||  | ||| | ||||||||||||
Sbjct: 90252 atcttctttcgttttcttggaacttcagaatgagaaacagccttctt 90206

>dbj|AK101832.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068L21, full
            insert sequence
          Length = 3478

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 287  tgtccatcactaaacaccttcacgtagcagagtgttcctccagcttcatccgcaaacgtt 346
            ||||||||| |||||| ||| || |  |||||  ||||||||| |||||| ||||| |||
Sbjct: 3068 tgtccatcagtaaacatcttaacatgacagagctttcctccagtttcatcggcaaatgtt 3009

                                                           
Query: 347  atcttcctacgtttcctcggcacttgtggatgcggaacagccttctt 393
            |||||| | ||||| || || ||||  | ||| | ||||||||||||
Sbjct: 3008 atcttctttcgttttcttggaacttcagaatgagaaacagccttctt 2962

>ref|XM_636680.1| Dictyostelium discoideum hypothetical protein (DDB0218164), partial
            mRNA
          Length = 6180

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 160  caacagcaacatcattacaac 180
            |||||||||||||||||||||
Sbjct: 2624 caacagcaacatcattacaac 2644

>gb|AC150516.2| Bos taurus  BAC CH240-117L9 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 237116

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 9      ggagggagtgattcataaact 29
              |||||||||||||||||||||
Sbjct: 178737 ggagggagtgattcataaact 178717

>gb|AC073370.7| Homo sapiens chromosome 10 clone RP11-472G21, complete sequence
          Length = 178253

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 9      ggagggagtgattcataaact 29
              |||||||||||||||||||||
Sbjct: 133816 ggagggagtgattcataaact 133836

>emb|AL732626.8| Mouse DNA sequence from clone RP23-191F22 on chromosome 4, complete
              sequence
          Length = 151688

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 211    gccacttcacatgatgcccaa 231
              |||||||||||||||||||||
Sbjct: 124533 gccacttcacatgatgcccaa 124513

>dbj|AB057768.1| Candida maltosa gene for Ray38p, complete cds
          Length = 2070

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   aaaaggagggagggagtgatt 21
           |||||||||||||||||||||
Sbjct: 726 aaaaggagggagggagtgatt 746

>gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, complete sequence
          Length = 197827

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaaaggagggagggagtgat 20
             ||||||||||||||||||||
Sbjct: 99555 aaaaggagggagggagtgat 99536

>gb|AC116877.18| Mus musculus chromosome 18, clone RP24-429E21, complete sequence
          Length = 188544

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 150    acaatcaactcaacagcaacatcattac 177
              ||||| |||||||||||||||| |||||
Sbjct: 177697 acaataaactcaacagcaacatgattac 177670

>gb|AC116799.9| Mus musculus chromosome 18, clone RP24-333N14, complete sequence
          Length = 164940

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 150    acaatcaactcaacagcaacatcattac 177
              ||||| |||||||||||||||| |||||
Sbjct: 110459 acaataaactcaacagcaacatgattac 110486

>emb|AL590006.4| Human DNA sequence from clone RP11-103C16 on chromosome 6 Contains part
             of the PTPRK gene for protein tyrosine phosphatase
             receptor type K (R-PTP-KAPPA) and the 3' end of a novel
             gene, complete sequence
          Length = 42689

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 19    attcataaactgatcgaactgtca 42
             ||||||||||||||| ||||||||
Sbjct: 16487 attcataaactgatcaaactgtca 16464

>gb|CP000302.1| Shewanella denitrificans OS217, complete genome
          Length = 4545906

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 105     aaaacagaggaacccacagg 124
               ||||||||||||||||||||
Sbjct: 1558186 aaaacagaggaacccacagg 1558205

>gb|AC007045.5| Arabidopsis thaliana chromosome 2 clone F23M2 map mi421, complete
             sequence
          Length = 117945

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    agatttagtcatggccaaaa 108
             ||||||||||||||||||||
Sbjct: 54757 agatttagtcatggccaaaa 54776

>gb|AC138356.3| Homo sapiens chromosome 8, clone RP11-863K10, complete sequence
          Length = 190274

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 4      aggagggagggagtgattca 23
              ||||||||||||||||||||
Sbjct: 112539 aggagggagggagtgattca 112520

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 368     acttgtggatgcggaacagc 387
               ||||||||||||||||||||
Sbjct: 4458055 acttgtggatgcggaacagc 4458074

>dbj|AP000066.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region,
             section 2/19
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 4     aggagggagggagtgattca 23
             ||||||||||||||||||||
Sbjct: 16895 aggagggagggagtgattca 16876


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,909,136
Number of Sequences: 3902068
Number of extensions: 3909136
Number of successful extensions: 86961
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86915
Number of HSP's gapped (non-prelim): 46
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)