ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl55a07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK121851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
2dbj|AK122056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 161 2e-36
3gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
6gb|BT019066.1| Zea mays clone Contig620.F mRNA sequence 101 2e-18
7gb|BT018877.1| Zea mays clone EL01T0203B08.d mRNA sequence 101 2e-18
8gb|AY109657.1| Zea mays CL30827_1 mRNA sequence 101 2e-18
9gb|AC154144.9| Mus musculus chromosome 1, clone RP24-289K8, comp... 42 1.4
10emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chr... 42 1.4
11emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chro... 42 1.4
12gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete... 40 5.6
13gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complet... 40 5.6
14gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987... 40 5.6
15ref|XM_538305.2| PREDICTED: Canis familiaris similar to carnitin... 40 5.6
16ref|XM_850877.1| PREDICTED: Canis familiaris similar to carnitin... 40 5.6
17ref|XM_850837.1| PREDICTED: Canis familiaris similar to carnitin... 40 5.6
18ref|XM_850793.1| PREDICTED: Canis familiaris similar to carnitin... 40 5.6
19emb|X91396.2|HTDNALZF1 Helobdella triserialis partial Lzf1 gene ... 40 5.6
20emb|AL607076.9| Human DNA sequence from clone RP11-321J5 on chro... 40 5.6
21emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chr... 40 5.6
22emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in l... 40 5.6
23gb|AC090309.4| Homo sapiens chromosome 11, clone RP11-142C4, com... 40 5.6
24gb|AC107486.4| Homo sapiens BAC clone RP11-814I21 from 4, comple... 40 5.6
25dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 40 5.6
26gb|AC097518.2| Homo sapiens BAC clone RP11-487E13 from 4, comple... 40 5.6
27gb|AC148828.2| Pan troglodytes BAC clone CH251-136M2 from chromo... 40 5.6
28gb|S79242.1| Pgh1b=2-phospho-D-glycerate hydrolase [Mesembryanth... 40 5.6
29gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complet... 40 5.6
30gb|AC073167.12| Homo sapiens chromosome 15, clone RP11-317G6, co... 40 5.6
31gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 ... 40 5.6
32dbj|AP001636.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.6
33emb|AJ620356.1| Oncorhynchus mykiss partial mRNA for carnitine p... 40 5.6
34gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, co... 40 5.6
35gb|U09194.1|MCU09194 Mesembryanthemum crystallinum 2-phospho-D-g... 40 5.6

>dbj|AK121851.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101M14, full
            insert sequence
          Length = 3448

 Score =  161 bits (81), Expect = 2e-36
 Identities = 144/165 (87%)
 Strand = Plus / Minus

                                                                        
Query: 257  atcacaggtacaatgagttggcaaacatgatgccccggcgcaagctctcgctcgccgctc 316
            ||||||| |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct: 3192 atcacagatacaatgagttggcgaacatgataccccgacgtaagctgtcgctggccgctc 3133

                                                                        
Query: 317  caaacttcttctcaaggttaacctccccaacggcttcagcggcagcttttagctgattta 376
            | ||||| ||||||||||||||||| ||||| |||| ||| |||||||| | |||||| |
Sbjct: 3132 cgaacttgttctcaaggttaacctcaccaacagcttgagcagcagctttcaactgattca 3073

                                                         
Query: 377  gaaattcatccagcctcctaactagccgtatgatgcttccttcaa 421
            ||||||||||||| || ||| | ||||||||||| ||||||||||
Sbjct: 3072 gaaattcatccagtcttctagccagccgtatgatacttccttcaa 3028



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>dbj|AK122056.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114L01, full
            insert sequence
          Length = 3438

 Score =  161 bits (81), Expect = 2e-36
 Identities = 144/165 (87%)
 Strand = Plus / Minus

                                                                        
Query: 257  atcacaggtacaatgagttggcaaacatgatgccccggcgcaagctctcgctcgccgctc 316
            ||||||| |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct: 3182 atcacagatacaatgagttggcgaacatgataccccgacgtaagctgtcgctggccgctc 3123

                                                                        
Query: 317  caaacttcttctcaaggttaacctccccaacggcttcagcggcagcttttagctgattta 376
            | ||||| ||||||||||||||||| ||||| |||| ||| |||||||| | |||||| |
Sbjct: 3122 cgaacttgttctcaaggttaacctcaccaacagcttgagcagcagctttcaactgattca 3063

                                                         
Query: 377  gaaattcatccagcctcctaactagccgtatgatgcttccttcaa 421
            ||||||||||||| || ||| | ||||||||||| ||||||||||
Sbjct: 3062 gaaattcatccagtcttctagccagccgtatgatacttccttcaa 3018



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>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09
              map S1559, complete sequence
          Length = 190721

 Score =  113 bits (57), Expect = 5e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                          
Query: 257    atcacaggtacaatgagttggcaaacatgatgccccggcgcaagctctcgctcgccgctc 316
              ||||||| |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct: 149866 atcacagatacaatgagttggcgaacatgataccccgacgtaagctgtcgctggccgctc 149925

                                                               
Query: 317    caaacttcttctcaaggttaacctccccaacggcttcagcggcagcttt 365
              | ||||| ||||||||||||||||| ||||| |||| ||| ||||||||
Sbjct: 149926 cgaacttgttctcaaggttaacctcaccaacagcttgagcagcagcttt 149974



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                   
Query: 369    ctgatttagaaattcatccagcctcctaactagccgtatgatgcttccttcaa 421
              |||||| |||||||||||||| || ||| | ||||||||||| ||||||||||
Sbjct: 150601 ctgattcagaaattcatccagtcttctagccagccgtatgatacttccttcaa 150653



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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  113 bits (57), Expect = 5e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 257     atcacaggtacaatgagttggcaaacatgatgccccggcgcaagctctcgctcgccgctc 316
               ||||||| |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct: 3782194 atcacagatacaatgagttggcgaacatgataccccgacgtaagctgtcgctggccgctc 3782253

                                                                
Query: 317     caaacttcttctcaaggttaacctccccaacggcttcagcggcagcttt 365
               | ||||| ||||||||||||||||| ||||| |||| ||| ||||||||
Sbjct: 3782254 cgaacttgttctcaaggttaacctcaccaacagcttgagcagcagcttt 3782302



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 369     ctgatttagaaattcatccagcctcctaactagccgtatgatgcttccttcaa 421
               |||||| |||||||||||||| || ||| | ||||||||||| ||||||||||
Sbjct: 3782929 ctgattcagaaattcatccagtcttctagccagccgtatgatacttccttcaa 3782981



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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  113 bits (57), Expect = 5e-22
 Identities = 96/109 (88%)
 Strand = Plus / Plus

                                                                           
Query: 257     atcacaggtacaatgagttggcaaacatgatgccccggcgcaagctctcgctcgccgctc 316
               ||||||| |||||||||||||| |||||||| ||||| || ||||| ||||| |||||||
Sbjct: 3790888 atcacagatacaatgagttggcgaacatgataccccgacgtaagctgtcgctggccgctc 3790947

                                                                
Query: 317     caaacttcttctcaaggttaacctccccaacggcttcagcggcagcttt 365
               | ||||| ||||||||||||||||| ||||| |||| ||| ||||||||
Sbjct: 3790948 cgaacttgttctcaaggttaacctcaccaacagcttgagcagcagcttt 3790996



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Plus

                                                                    
Query: 369     ctgatttagaaattcatccagcctcctaactagccgtatgatgcttccttcaa 421
               |||||| |||||||||||||| || ||| | ||||||||||| ||||||||||
Sbjct: 3791623 ctgattcagaaattcatccagtcttctagccagccgtatgatacttccttcaa 3791675



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>gb|BT019066.1| Zea mays clone Contig620.F mRNA sequence
          Length = 843

 Score =  101 bits (51), Expect = 2e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                       
Query: 319 aacttcttctcaaggttaacctccccaacggcttcagcggcagcttttagctgatttaga 378
           |||||||||||||||||||||||||| ||||||||||| |||||| | | |||||| |||
Sbjct: 397 aacttcttctcaaggttaacctcccccacggcttcagcagcagctctcaactgattcaga 456

                                                      
Query: 379 aattcatccagcctcctaactagccgtatgatgcttccttcaa 421
           |||||||||||||| ||| | || | |||||  ||||||||||
Sbjct: 457 aattcatccagccttctagcaagtcttatgacacttccttcaa 499



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>gb|BT018877.1| Zea mays clone EL01T0203B08.d mRNA sequence
          Length = 1726

 Score =  101 bits (51), Expect = 2e-18
 Identities = 90/103 (87%)
 Strand = Plus / Minus

                                                                        
Query: 319  aacttcttctcaaggttaacctccccaacggcttcagcggcagcttttagctgatttaga 378
            |||||||||||||||||||||||||| ||||||||||| |||||| | | |||||| |||
Sbjct: 1434 aacttcttctcaaggttaacctcccccacggcttcagcagcagctctcaactgattcaga 1375

                                                       
Query: 379  aattcatccagcctcctaactagccgtatgatgcttccttcaa 421
            |||||||||||||| ||| | || | |||||  ||||||||||
Sbjct: 1374 aattcatccagccttctagcaagtcttatgacacttccttcaa 1332



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>gb|AY109657.1| Zea mays CL30827_1 mRNA sequence
          Length = 1658

 Score =  101 bits (51), Expect = 2e-18
 Identities = 90/103 (87%)
 Strand = Plus / Plus

                                                                       
Query: 319 aacttcttctcaaggttaacctccccaacggcttcagcggcagcttttagctgatttaga 378
           |||||||||||||||||||||||||| ||||||||||| |||||| | | |||||| |||
Sbjct: 384 aacttcttctcaaggttaacctcccctacggcttcagcagcagctctcaactgattcaga 443

                                                      
Query: 379 aattcatccagcctcctaactagccgtatgatgcttccttcaa 421
           |||||||||||||| ||| | || | |||||  ||||||||||
Sbjct: 444 aattcatccagccttctagcaagtcttatgacacttccttcaa 486



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>gb|AC154144.9| Mus musculus chromosome 1, clone RP24-289K8, complete sequence
          Length = 158556

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   tctgctaacttgtttcaaaaa 202
             |||||||||||||||||||||
Sbjct: 92025 tctgctaacttgtttcaaaaa 92005



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>emb|AL672034.5| Mouse DNA sequence from clone RP23-461P10 on chromosome X, complete
             sequence
          Length = 199101

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 156   acaaattacaaaacagctaca 176
             |||||||||||||||||||||
Sbjct: 89387 acaaattacaaaacagctaca 89407



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>emb|AL672055.8| Mouse DNA sequence from clone RP23-339K2 on chromosome X, complete
              sequence
          Length = 232188

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 148    tgtcaaagacaaattacaaaa 168
              |||||||||||||||||||||
Sbjct: 116718 tgtcaaagacaaattacaaaa 116698



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>gb|AC009357.8| Drosophila melanogaster clone BACR18I07, complete sequence
          Length = 179374

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttacaaaaatgttgatgtat 39
              ||||||||||||||||||||
Sbjct: 135625 ttacaaaaatgttgatgtat 135606



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>gb|AC008224.19| Drosophila melanogaster clone BACR29J02, complete sequence
          Length = 181633

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     ttacaaaaatgttgatgtat 39
              ||||||||||||||||||||
Sbjct: 156023 ttacaaaaatgttgatgtat 156042



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>gb|U91324.1|HUU91324 Homo sapiens Chromosome 16 BAC clone CIT987-SKA-100B4  ~complete
             genomic sequence, complete sequence
          Length = 174826

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   aaggttaacctccccaacgg 349
             ||||||||||||||||||||
Sbjct: 16285 aaggttaacctccccaacgg 16266



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>ref|XM_538305.2| PREDICTED: Canis familiaris similar to carnitine palmitoyltransferase
            1B isoform a, transcript variant 1 (LOC481184), mRNA
          Length = 2629

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctgtggcagacgatggctac 135
            ||||||||||||||||||||
Sbjct: 2195 ctgtggcagacgatggctac 2214



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>ref|XM_850877.1| PREDICTED: Canis familiaris similar to carnitine palmitoyltransferase
            1B isoform a, transcript variant 6 (LOC481184), mRNA
          Length = 2629

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctgtggcagacgatggctac 135
            ||||||||||||||||||||
Sbjct: 2195 ctgtggcagacgatggctac 2214



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>ref|XM_850837.1| PREDICTED: Canis familiaris similar to carnitine palmitoyltransferase
            1B isoform a, transcript variant 5 (LOC481184), mRNA
          Length = 2596

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctgtggcagacgatggctac 135
            ||||||||||||||||||||
Sbjct: 2162 ctgtggcagacgatggctac 2181



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>ref|XM_850793.1| PREDICTED: Canis familiaris similar to carnitine palmitoyltransferase
            1B isoform a, transcript variant 4 (LOC481184), mRNA
          Length = 2644

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctgtggcagacgatggctac 135
            ||||||||||||||||||||
Sbjct: 2210 ctgtggcagacgatggctac 2229



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>emb|X91396.2|HTDNALZF1 Helobdella triserialis partial Lzf1 gene for leech zinc finger 1
           protein
          Length = 2045

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 190 cttgtttcaaaaaacatttg 209
           ||||||||||||||||||||
Sbjct: 741 cttgtttcaaaaaacatttg 760



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>emb|AL607076.9| Human DNA sequence from clone RP11-321J5 on chromosome 10, complete
             sequence
          Length = 61344

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 141   catgtcatgtcaaagacaaa 160
             ||||||||||||||||||||
Sbjct: 39082 catgtcatgtcaaagacaaa 39101



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>emb|AL162733.9| Human DNA sequence from clone RP11-397F23 on chromosome 9 Contains the
              5'end of the protein tyrosine phosphatase (non-receptor
              type 3) gene, a novel pseudogene, apseudogene similar to
              mouse Ybox transcription factor and a CpG island, complete
              sequence
          Length = 189367

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 357    ggcagcttttagctgatttagaaa 380
              |||||||||||||||||| |||||
Sbjct: 185240 ggcagcttttagctgattaagaaa 185263



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>emb|AL929016.5| Zebrafish DNA sequence from clone DKEY-24J9 in linkage group 4 Contains
             the gene for a novel protein (zgc:63880), the 3' end of
             the gene for a novel protein similar to vertebrate KCND2,
             the 5' end of the ing3 gene for inhibitor of growth family
             member 3 and a CpG island, complete sequence
          Length = 200582

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 156   acaaattacaaaacagctacattt 179
             ||||||||||||||||| ||||||
Sbjct: 18746 acaaattacaaaacagcaacattt 18723



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>gb|AC090309.4| Homo sapiens chromosome 11, clone RP11-142C4, complete sequence
          Length = 161586

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tttgctctgctaacttgttt 196
             ||||||||||||||||||||
Sbjct: 77488 tttgctctgctaacttgttt 77469



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>gb|AC107486.4| Homo sapiens BAC clone RP11-814I21 from 4, complete sequence
          Length = 59463

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 28    atgttgatgtataacagattgctt 51
             ||||||||||||||||| ||||||
Sbjct: 50879 atgttgatgtataacagtttgctt 50902



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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    aaacttcttctcaaggttaa 337
              ||||||||||||||||||||
Sbjct: 280491 aaacttcttctcaaggttaa 280472



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>gb|AC097518.2| Homo sapiens BAC clone RP11-487E13 from 4, complete sequence
          Length = 189323

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 105    tacatcctatgctgtggcag 124
              ||||||||||||||||||||
Sbjct: 140229 tacatcctatgctgtggcag 140210



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>gb|AC148828.2| Pan troglodytes BAC clone CH251-136M2 from chromosome 7, complete
             sequence
          Length = 162801

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   tgctctgctaacttgtttcaaaaa 202
             ||||||||||||||||| ||||||
Sbjct: 73346 tgctctgctaacttgttgcaaaaa 73323



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>gb|S79242.1| Pgh1b=2-phospho-D-glycerate hydrolase [Mesembryanthemum
            crystallinum=common ice plant, mRNA Partial, 1683 nt]
          Length = 1683

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  acttcttctcaaggttaacc 339
            ||||||||||||||||||||
Sbjct: 1074 acttcttctcaaggttaacc 1093



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>gb|AC007464.4| Homo sapiens BAC clone RP11-542B5 from 2, complete sequence
          Length = 186187

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    aaggttaacctccccaacgg 349
              ||||||||||||||||||||
Sbjct: 141356 aaggttaacctccccaacgg 141337



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>gb|AC073167.12| Homo sapiens chromosome 15, clone RP11-317G6, complete sequence
          Length = 174654

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   atgtcaaagacaaattacaaaaca 170
             |||||||||| |||||||||||||
Sbjct: 29629 atgtcaaagataaattacaaaaca 29606



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>gb|AE003601.4| Drosophila melanogaster chromosome 3R, section 7 of 118 of the complete
              sequence
          Length = 305165

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     ttacaaaaatgttgatgtat 39
              ||||||||||||||||||||
Sbjct: 278426 ttacaaaaatgttgatgtat 278407



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>dbj|AP001636.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-142C4, complete
             sequence
          Length = 161582

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 177   tttgctctgctaacttgttt 196
             ||||||||||||||||||||
Sbjct: 77486 tttgctctgctaacttgttt 77467



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>emb|AJ620356.1| Oncorhynchus mykiss partial mRNA for carnitine palmitoyltransferase I
            (cpt1 gene), isoform D
          Length = 2724

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 116  ctgtggcagacgatggctac 135
            ||||||||||||||||||||
Sbjct: 1082 ctgtggcagacgatggctac 1101



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>gb|AC118274.9| Homo sapiens chromosome 15, clone RP11-265M18, complete sequence
          Length = 177432

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 147    atgtcaaagacaaattacaaaaca 170
              |||||||||| |||||||||||||
Sbjct: 175231 atgtcaaagataaattacaaaaca 175208



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>gb|U09194.1|MCU09194 Mesembryanthemum crystallinum 2-phospho-D-glycerate hydrolase,
            enolase, mRNA, complete cds
          Length = 1628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  acttcttctcaaggttaacc 339
            ||||||||||||||||||||
Sbjct: 1074 acttcttctcaaggttaacc 1093


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,132,172
Number of Sequences: 3902068
Number of extensions: 4132172
Number of successful extensions: 82333
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82213
Number of HSP's gapped (non-prelim): 120
length of query: 421
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 399
effective length of database: 17,147,199,772
effective search space: 6841732709028
effective search space used: 6841732709028
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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