ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54h12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR382292.9| Zebrafish DNA sequence from clone DKEY-96L17 in ... 44 0.11
2emb|BX323038.3| Zebrafish DNA sequence from clone DKEYP-57D7 in ... 44 0.11
3emb|BX936452.24| Zebrafish DNA sequence from clone CH211-282C13 ... 42 0.42
4emb|AL935324.8| Zebrafish DNA sequence from clone CH211-197B6 in... 42 0.42
5emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 ... 40 1.7
6emb|CR361543.9| Zebrafish DNA sequence from clone CH211-25E11 in... 40 1.7
7emb|AL137878.11| Human DNA sequence from clone RP11-145J3 on chr... 40 1.7
8emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in ... 40 1.7
9emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in... 40 1.7
10emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, co... 40 1.7
11emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in l... 40 1.7
12emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 i... 40 1.7
13emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 i... 40 1.7
14emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in l... 40 1.7
15gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr... 38 6.5
16gb|AE017263.1| Mesoplasma florum L1 complete genome 38 6.5
17emb|CT030383.1| Xenopus tropicalis finished cDNA, clone TEgg113c22 38 6.5
18emb|BX950226.13| Zebrafish DNA sequence from clone CH211-105P23 ... 38 6.5
19ref|XM_567836.1| Cryptococcus neoformans var. neoformans JEC21 h... 38 6.5
20ref|XM_567837.1| Cryptococcus neoformans var. neoformans JEC21 h... 38 6.5
21emb|CR293534.5| Zebrafish DNA sequence from clone CH211-13J1 in ... 38 6.5
22emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 i... 38 6.5
23emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 i... 38 6.5
24emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 i... 38 6.5
25emb|BX000531.11| Human DNA sequence from clone DAQB-12N14 on chr... 38 6.5
26emb|BX004810.8| Human DNA sequence from clone DAQB-304F3 on chro... 38 6.5
27emb|BX247947.4| Human DNA sequence from clone DASS-372E1 on chro... 38 6.5
28emb|AL645927.3| Human DNA sequence from clone XXbac-13B8 on chro... 38 6.5
29emb|AL662869.2| Human DNA sequence from clone XXbac-128A13 on ch... 38 6.5
30emb|AL031769.1|HS194O8 Human DNA sequence from clone RP1-194O8 o... 38 6.5
31emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in... 38 6.5
32emb|CR388393.8| Human DNA sequence from clone DADB-136A24 on chr... 38 6.5
33emb|CR848056.4| Human DNA sequence from clone DAAP-34I1 on chrom... 38 6.5
34emb|BX005437.5| Zebrafish DNA sequence from clone CH211-158M21 i... 38 6.5
35emb|CR759768.2| Human DNA sequence from clone DAMC-143I21 on chr... 38 6.5
36gb|AC104608.7| Drosophila melanogaster X BAC RP98-35A18 (Roswell... 38 6.5
37gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell... 38 6.5
38emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 i... 38 6.5
39gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete se... 38 6.5
40emb|BX649275.5| Zebrafish DNA sequence from clone CH211-199K7 in... 38 6.5
41emb|BX294371.15| Zebrafish DNA sequence from clone CH211-263B6 i... 38 6.5
42emb|BX927133.5| Human DNA sequence from clone DAMA-61E19 on chro... 38 6.5
43emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in... 38 6.5
44emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, ... 38 6.5
45emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, ... 38 6.5
46emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in ... 38 6.5
47emb|BX120013.5| Zebrafish DNA sequence from clone DKEY-76H10, co... 38 6.5
48emb|BX936412.46| Zebrafish DNA sequence from clone DKEY-235H13, ... 38 6.5
49gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 ... 38 6.5
50gb|AY609897.1| Sus scrofa clone Clu_39.scr.msk.p1.Contig3, mRNA ... 38 6.5
51gb|AC004174.1|AC004174 Homo sapiens clone UWGC:y34b273 from 6p21... 38 6.5
52gb|AC004178.1|AC004178 Homo sapiens clone UWGC:y19x006 from 6p21... 38 6.5
53emb|AL035542.8|HS994E9 Human DNA sequence from clone RP5-994E9 o... 38 6.5
54emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, c... 38 6.5
55emb|AL627166.6| Mouse DNA sequence from clone RP23-59N8 on chrom... 38 6.5 
>emb|CR382292.9| Zebrafish DNA sequence from clone DKEY-96L17 in linkage group 5, complete
              sequence
          Length = 178208

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 32     catgacatttattgccatgtac 53
              ||||||||||||||||||||||
Sbjct: 130498 catgacatttattgccatgtac 130519
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>emb|BX323038.3| Zebrafish DNA sequence from clone DKEYP-57D7 in linkage group 1,
             complete sequence
          Length = 87548

 Score = 44.1 bits (22), Expect = 0.11
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 32    catgacatttattgccatgtac 53
             ||||||||||||||||||||||
Sbjct: 10888 catgacatttattgccatgtac 10867
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>emb|BX936452.24| Zebrafish DNA sequence from clone CH211-282C13 in linkage group 13,
             complete sequence
          Length = 136110

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 32    catgacatttattgccatgta 52
             |||||||||||||||||||||
Sbjct: 16063 catgacatttattgccatgta 16043
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>emb|AL935324.8| Zebrafish DNA sequence from clone CH211-197B6 in linkage group 10,
              complete sequence
          Length = 197730

 Score = 42.1 bits (21), Expect = 0.42
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 55     cgcctagcaaatgggagagag 75
              |||||||||||||||||||||
Sbjct: 132170 cgcctagcaaatgggagagag 132150
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>emb|CR388077.11| Zebrafish DNA sequence from clone CH211-286E11 in linkage group 8,
              complete sequence
          Length = 192705

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     atttaccatgacatttattgccat 49
              |||| |||||||||||||||||||
Sbjct: 181438 attttccatgacatttattgccat 181415
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>emb|CR361543.9| Zebrafish DNA sequence from clone CH211-25E11 in linkage group 8,
            complete sequence
          Length = 66809

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 26   atttaccatgacatttattgccat 49
            ||||| ||||||||||||||||||
Sbjct: 7238 atttaacatgacatttattgccat 7215
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>emb|AL137878.11| Human DNA sequence from clone RP11-145J3 on chromosome 13 Contains the
             3' end of the EPSTI1 gene for epithelial stromal
             interaction 1 (breast), a  novel gene and a pseudogene,
             complete sequence
          Length = 87358

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 32    catgacatttattgccatgt 51
             ||||||||||||||||||||
Sbjct: 16168 catgacatttattgccatgt 16149
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>emb|BX548071.7| Zebrafish DNA sequence from clone DKEY-25L23 in linkage group 9, complete
              sequence
          Length = 223099

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     atttaccatgacatttattgccat 49
              ||||| ||||||||||||||||||
Sbjct: 125126 atttaacatgacatttattgccat 125149
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>emb|CR847543.13| Zebrafish DNA sequence from clone DKEY-183P4 in linkage group 8, complete
              sequence
          Length = 207382

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 26     atttaccatgacatttattgccat 49
              ||||| ||||||||||||||||||
Sbjct: 192648 atttaacatgacatttattgccat 192671
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>emb|BX323602.7| Zebrafish DNA sequence from clone RP71-61H23, complete sequence
          Length = 156514

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 26    atttaccatgacatttattgccat 49
             ||||| ||||||||||||||||||
Sbjct: 10463 atttaacatgacatttattgccat 10440
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>emb|BX004888.9| Zebrafish DNA sequence from clone DKEY-8F21 in linkage group 1, complete
              sequence
          Length = 219280

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     atttaccatgacatttattgccat 49
              ||||||| ||||||||||||||||
Sbjct: 141204 atttaccttgacatttattgccat 141181
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>emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 in linkage group 10,
             complete sequence
          Length = 185190

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    atttaccatgacatttattgccat 49
             ||||||||| ||||||||||||||
Sbjct: 65279 atttaccataacatttattgccat 65302
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>emb|AL954309.11| Zebrafish DNA sequence from clone CH211-213D2 in linkage group 8,
              complete sequence
          Length = 209195

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 26     atttaccatgacatttattgccat 49
              ||||| ||||||||||||||||||
Sbjct: 134576 atttaacatgacatttattgccat 134553
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>emb|BX072550.6| Zebrafish DNA sequence from clone DKEY-24P1 in linkage group 15,
             complete sequence
          Length = 229061

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 26    atttaccatgacatttattgccat 49
             ||||| ||||||||||||||||||
Sbjct: 79692 atttaacatgacatttattgccat 79715
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>gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
              sequence
          Length = 1019846

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 48     atgtacacgcctagcaaat 66
              |||||||||||||||||||
Sbjct: 475450 atgtacacgcctagcaaat 475468
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>gb|AE017263.1| Mesoplasma florum L1 complete genome
          Length = 793224

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 26     atttaccatgacatttatt 44
              |||||||||||||||||||
Sbjct: 496739 atttaccatgacatttatt 496721
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>emb|CT030383.1| Xenopus tropicalis finished cDNA, clone TEgg113c22
          Length = 4368

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 23 aggatttaccatgacattt 41
          |||||||||||||||||||
Sbjct: 43 aggatttaccatgacattt 61
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>emb|BX950226.13| Zebrafish DNA sequence from clone CH211-105P23 in linkage group 7,
             complete sequence
          Length = 174681

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 78259 catgacatttattgccatg 78277
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>ref|XM_567836.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01620) partial mRNA
          Length = 2018

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  atgtacacgcctagcaaat 66
           |||||||||||||||||||
Sbjct: 296 atgtacacgcctagcaaat 314
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>ref|XM_567837.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNK01620) partial mRNA
          Length = 1994

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  atgtacacgcctagcaaat 66
           |||||||||||||||||||
Sbjct: 272 atgtacacgcctagcaaat 290
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>emb|CR293534.5| Zebrafish DNA sequence from clone CH211-13J1 in linkage group 6,
             complete sequence
          Length = 109426

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 76513 catgacatttattgccatg 76531
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>emb|CR391949.7| Zebrafish DNA sequence from clone CH211-149B20 in linkage group 9,
            complete sequence
          Length = 162252

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 26   atttaccatgacatttatt 44
            |||||||||||||||||||
Sbjct: 2399 atttaccatgacatttatt 2417
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>emb|CR396587.8| Zebrafish DNA sequence from clone CH211-261P15 in linkage group 16,
             complete sequence
          Length = 91165

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 26    atttaccatgacatttattgcca 48
             |||| ||||||||||||||||||
Sbjct: 35101 attttccatgacatttattgcca 35079
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>emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 in linkage group 7,
             complete sequence
          Length = 166088

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 19964 catgacatttattgccatg 19946
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>emb|BX000531.11| Human DNA sequence from clone DAQB-12N14 on chromosome 6 Contains the
            OR2H1 gene for olfactory receptor, family 2, subfamily H,
            member 1, the UBDP1 pseudogene for ubiquitin D pseudogene
            1, the MAS1L gene for MAS1 oncogene-like, the RPS17P1
            pseudogene for ribosomal protein S17 pseudogene 1 and the
            DAQB-12N14.5 gene for a novel transcript, complete
            sequence
          Length = 89139

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 60   agcaaatgggagagagatg 78
            |||||||||||||||||||
Sbjct: 1505 agcaaatgggagagagatg 1487
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>emb|BX004810.8| Human DNA sequence from clone DAQB-304F3 on chromosome 6 Contains the
             OR12D1P pseudogene for olfactory receptor, family 12,
             subfamily D, member 1, the OR11A1 gene for olfactory
             receptor, family 11, subfamily A, member 1, the OR10C1
             gene for olfactory receptor, family 10, subfamily C,
             member 1 and no CpG islands, complete sequence
          Length = 32573

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 32078 agcaaatgggagagagatg 32060
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>emb|BX247947.4| Human DNA sequence from clone DASS-372E1 on chromosome 6, complete
            sequence
          Length = 112061

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 60   agcaaatgggagagagatg 78
            |||||||||||||||||||
Sbjct: 5286 agcaaatgggagagagatg 5268
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>emb|AL645927.3| Human DNA sequence from clone XXbac-13B8 on chromosome 6 contains the
             OR12D2, OR11A1, OR10C1 and OR2H1 genes for olfactory
             receptor, family 12, subfamily D, member 2, family 11,
             subfamily A, member 1, family 10, subfamily C, member 1
             and family 2, subfamily H, member 1, the OR12D1P
             pseudogene for olfactory receptor, family12, subfamily D,
             member 1, a diubiquitin pseudogene, the MRG gene for
             MAS-related G protein-coupled receptor MRG and a ribosomal
             protein S17 (RPS17) pseudogene, complete sequence
          Length = 112578

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 55971 agcaaatgggagagagatg 55953
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>emb|AL662869.2| Human DNA sequence from clone XXbac-128A13 on chromosome 6 contains the
             OR12D2, OR11A1, OR10C1 and OR2H1 genes for olfactory
             receptor, family 12, subfamily D, member 2, family 11,
             subfamily A, member 1, family 10, subfamily C, member 1,
             family 2, subfamily H, member 1, the gene for MAS-related
             G protein-coupled receptor (MRG), the OR12D1P pseudogene
             for olfactory receptor, family 12, subfamily D, member 1,
             a diubiquitin pseudogene and a ribosomal protein S17
             (RPS17) pseudogene, complete sequence
          Length = 133836

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 52635 agcaaatgggagagagatg 52617
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>emb|AL031769.1|HS194O8 Human DNA sequence from clone RP1-194O8 on chromosome 6q24.1-25.3,
             complete sequence
          Length = 126839

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ccatgtacacgcctagcaa 64
             |||||||||||||||||||
Sbjct: 27105 ccatgtacacgcctagcaa 27123
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>emb|BX901898.15| Zebrafish DNA sequence from clone DKEY-148E3 in linkage group 1,
             complete sequence
          Length = 249378

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 89903 catgacatttattgccatg 89885
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>emb|CR388393.8| Human DNA sequence from clone DADB-136A24 on chromosome 6, complete
             sequence
          Length = 159366

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 77443 agcaaatgggagagagatg 77425
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>emb|CR848056.4| Human DNA sequence from clone DAAP-34I1 on chromosome 6, complete
             sequence
          Length = 28527

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 25021 agcaaatgggagagagatg 25003
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>emb|BX005437.5| Zebrafish DNA sequence from clone CH211-158M21 in linkage group 7,
              complete sequence
          Length = 180673

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 34     tgacatttattgccatgta 52
              |||||||||||||||||||
Sbjct: 137890 tgacatttattgccatgta 137908
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>emb|CR759768.2| Human DNA sequence from clone DAMC-143I21 on chromosome 6, complete
             sequence
          Length = 123752

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 32082 agcaaatgggagagagatg 32064
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>gb|AC104608.7| Drosophila melanogaster X BAC RP98-35A18 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 174893

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 38    atttattgccatgtacacg 56
             |||||||||||||||||||
Sbjct: 13907 atttattgccatgtacacg 13889
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>gb|AC104606.6| Drosophila melanogaster X BAC RP98-26L11 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 183105

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 38     atttattgccatgtacacg 56
              |||||||||||||||||||
Sbjct: 181121 atttattgccatgtacacg 181103
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>emb|BX649403.4| Zebrafish DNA sequence from clone CH211-153M11 in linkage group 13,
              complete sequence
          Length = 170097

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 32     catgacatttattgccatg 50
              |||||||||||||||||||
Sbjct: 144608 catgacatttattgccatg 144590
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>gb|AC148528.15| Medicago truncatula clone mth2-53h4, complete sequence
          Length = 141776

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 23     aggatttaccatgacatttattg 45
              |||||||||||||| ||||||||
Sbjct: 139875 aggatttaccatgaaatttattg 139853
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>emb|BX649275.5| Zebrafish DNA sequence from clone CH211-199K7 in linkage group 24,
              complete sequence
          Length = 118765

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 57     cctagcaaatgggagagag 75
              |||||||||||||||||||
Sbjct: 111652 cctagcaaatgggagagag 111670
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>emb|BX294371.15| Zebrafish DNA sequence from clone CH211-263B6 in linkage group 5,
             complete sequence
          Length = 152696

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 27    tttaccatgacatttattgccat 49
             |||| ||||||||||||||||||
Sbjct: 29058 tttaacatgacatttattgccat 29036
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>emb|BX927133.5| Human DNA sequence from clone DAMA-61E19 on chromosome 6, complete
             sequence
          Length = 107459

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 46140 agcaaatgggagagagatg 46122
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>emb|BX323843.9| Zebrafish DNA sequence from clone CH211-10A23 in linkage group 19,
             complete sequence
          Length = 128245

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    ccatgacatttattgccat 49
             |||||||||||||||||||
Sbjct: 34156 ccatgacatttattgccat 34174
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>emb|BX005450.9| Zebrafish DNA sequence from clone CH211-150O23, complete sequence
          Length = 164218

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 33657 catgacatttattgccatg 33639
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>emb|BX005002.9| Zebrafish DNA sequence from clone CH211-130M12, complete sequence
          Length = 170274

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     catgacatttattgccatg 50
              |||||||||||||||||||
Sbjct: 103292 catgacatttattgccatg 103310
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>emb|BX005424.10| Zebrafish DNA sequence from clone DKEY-3N22 in linkage group 19, complete
              sequence
          Length = 200523

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 32     catgacatttattgccatgtaca 54
              |||||||||||||||||| ||||
Sbjct: 128732 catgacatttattgccatataca 128710
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>emb|BX120013.5| Zebrafish DNA sequence from clone DKEY-76H10, complete sequence
          Length = 170264

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     catgacatttattgccatg 50
              |||||||||||||||||||
Sbjct: 138034 catgacatttattgccatg 138052
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>emb|BX936412.46| Zebrafish DNA sequence from clone DKEY-235H13, complete sequence
          Length = 178114

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 32     catgacatttattgccatg 50
              |||||||||||||||||||
Sbjct: 114979 catgacatttattgccatg 114997
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>gb|AE003441.3| Drosophila melanogaster chromosome X, section 25 of 74 of the complete
              sequence
          Length = 285949

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 38     atttattgccatgtacacg 56
              |||||||||||||||||||
Sbjct: 110727 atttattgccatgtacacg 110745
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>gb|AY609897.1| Sus scrofa clone Clu_39.scr.msk.p1.Contig3, mRNA sequence
          Length = 857

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 57  cctagcaaatgggagagag 75
           |||||||||||||||||||
Sbjct: 741 cctagcaaatgggagagag 723
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>gb|AC004174.1|AC004174 Homo sapiens clone UWGC:y34b273 from 6p21, complete sequence
          Length = 37760

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 60   agcaaatgggagagagatg 78
            |||||||||||||||||||
Sbjct: 1960 agcaaatgggagagagatg 1978
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>gb|AC004178.1|AC004178 Homo sapiens clone UWGC:y19x006 from 6p21, complete sequence
          Length = 36384

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 34084 agcaaatgggagagagatg 34102
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>emb|AL035542.8|HS994E9 Human DNA sequence from clone RP5-994E9 on chromosome 6p21.31-22.2
             Contains the OR12D2, OR11A1, OR10C1 and OR2H1 genes for
             olfactory receptors 12D2, 11A1, 10C1 and 2H1, olfactory
             receptor 12D1 pseudogene OR12D1P, a diubiquitin
             pseudogene, the MAS-related G protein-coupled receptor MRG
             gene, an RPS17 (40S ribosomal protein S17) pseudogene and
             GSSs, complete sequence
          Length = 114868

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    agcaaatgggagagagatg 78
             |||||||||||||||||||
Sbjct: 57851 agcaaatgggagagagatg 57833
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>emb|AL928967.9| Zebrafish DNA sequence from clone CH211-153A8, complete sequence
          Length = 186487

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 32    catgacatttattgccatg 50
             |||||||||||||||||||
Sbjct: 57271 catgacatttattgccatg 57289
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>emb|AL627166.6| Mouse DNA sequence from clone RP23-59N8 on chromosome 4, complete
              sequence
          Length = 237007

 Score = 38.2 bits (19), Expect = 6.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 63     aaatgggagagagatggta 81
              |||||||||||||||||||
Sbjct: 120352 aaatgggagagagatggta 120334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,024,615
Number of Sequences: 3902068
Number of extensions: 1024615
Number of successful extensions: 67421
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67311
Number of HSP's gapped (non-prelim): 110
length of query: 138
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 117
effective length of database: 17,151,101,840
effective search space: 2006678915280
effective search space used: 2006678915280
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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