>SIA4B_RAT (Q11205) CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,|
           3-sialyltransferase (EC 2.4.99.-) (Beta-galactoside
           alpha-2,3-sialyltransferase) (Alpha 2,3-ST) (Gal-NAc6S)
           (Gal-beta-1,3-GalNAc-alpha-2,3-sialyltransferase)
           (ST3GALA.2) (SIAT4-B) (ST3
          Length = 350

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 291 GTAEWYNSHMDSKYALISEIWT 356
           GT+EW++SH DS    IS +WT
Sbjct: 80  GTSEWFDSHFDSN---ISPVWT 98

>TAB3_XENLA (Q7ZXH3) Mitogen-activated protein kinase kinase kinase|
           7-interacting protein 3 homolog
          Length = 692

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +1

Query: 121 IPECFLQDHSDTSVCYKRIQEQNCK 195
           + +C LQ++S+   CY+ + +++CK
Sbjct: 28  VSQCMLQNNSNLDACYRALTQESCK 52

>PYR5_FREDI (P11401) Phycobilisome 37.5 kDa linker polypeptide,|
           phycocyanin-associated, rod (L-37.5/R)
          Length = 268

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = +2

Query: 152 IHQYVTKEYRNKTAKLLHDHQQHNLCGYRY*PHIYALQLSP*RRTVGYSRMVQ 310
           ++ Y  K Y  +    +   +     G R  PH    +  P ++TVG++RM Q
Sbjct: 114 VNLYTEKGYEAEINSYIDSAEYQESFGERIVPHYRGFETQPGQKTVGFNRMFQ 166

>PYRH_CHLTR (O84685) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase)
          Length = 245

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 3/42 (7%)
 Frame = -3

Query: 296 CTLPFVVMVKAARHIYGVNNDNHRDCA---ADDHATVLQFCS 180
           C L   V++KA  H+ GV + + R+CA     DH +   F S
Sbjct: 153 CELKVDVLLKATMHVDGVYDQDPRECADAVRYDHISYRDFLS 194

>NU5M_FELCA (P48921) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 606

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 7/40 (17%)
 Frame = -3

Query: 101 IPRMLLQHFIIMTALCVHLWGF*I-------LKSLQFMFP 3
           IP+M + +++ +TAL V + GF +        K+L+FM+P
Sbjct: 477 IPQMTMPYYLKLTALAVTIAGFILALELNLAAKNLKFMYP 516

>COX2_BRECS (P43370) Cytochrome c oxidase subunit 2 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide II)
          Length = 247

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
 Frame = -1

Query: 394 MVTFLSNSRF*LQVQISEINAYLESMWLLYHSAV-PYRSSSW*KLQGIYMGLITITTEIV 218
           M+   +N  F L + +  +   L +M   Y+ +V PY+  +    QG +M ++  T   V
Sbjct: 32  MLELHNNVVFYLCMMLGFVTFMLYNMLTTYNKSVMPYKYLN----QGQFMEMMWTTLPAV 87

Query: 217 LLMIMQQFCSFVPVFFCNILMYQNGPARNIR 125
           +L+++  F SF+ ++ C+ +M    PA  I+
Sbjct: 88  MLLMIA-FPSFILLYMCDEVM---APAMTIK 114

>NU5M_CANFA (Q9ZZ57) NADH-ubiquinone oxidoreductase chain 5 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 5)
          Length = 606

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 101 IPRMLLQHFIIMTALCVHLWGF 36
           IP+M + H++ MTAL V + GF
Sbjct: 477 IPQMTMPHYLKMTALAVTILGF 498


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,649,919
Number of Sequences: 219361
Number of extensions: 1138268
Number of successful extensions: 2488
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2487
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)