ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54h09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
2dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic D... 56 9e-05
3dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
4dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
5dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.022
6gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, comple... 42 1.3
7gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, compl... 42 1.3
8gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complet... 42 1.3
9emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chro... 42 1.3
10gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, compl... 42 1.3
11ref|XM_475025.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
12ref|XM_471288.1| Oryza sativa (japonica cultivar-group), predic... 40 5.3
13gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
14gb|BC077893.1| Xenopus laevis MGC80709 protein, mRNA (cDNA clone... 40 5.3
15gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
16emb|CR954964.4| Mouse DNA sequence from clone RP24-201A22 on chr... 40 5.3
17ref|XM_733144.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.3
18ref|XM_738904.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.3
19emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
20emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
21emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
22emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in... 40 5.3
23emb|CR406732.1| Gallus gallus finished cDNA, clone ChEST989n3 40 5.3
24emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chro... 40 5.3
25emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chr... 40 5.3
26emb|BX936348.7| Mouse DNA sequence from clone RP23-348D19 on chr... 40 5.3
27emb|BX936354.6| Mouse DNA sequence from clone RP23-354D7 on chro... 40 5.3
28dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
29dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
30dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
31dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
32dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
33dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
34emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
35gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome ... 40 5.3
36dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
37dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
38dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
39dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
40dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
41dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
42emb|BX664729.3| Mouse DNA sequence from clone RP24-251C18 on chr... 40 5.3
43dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
44dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
45dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
46dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
47dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
48emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chro... 40 5.3
49dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
50dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.3
51gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 ma... 40 5.3
52dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 5.3
53gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
54gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.3
55emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chr... 40 5.3
56emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4,... 40 5.3
57emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb... 40 5.3
58emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116... 40 5.3
59emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.3
60emb|CR354601.14| Mouse DNA sequence from clone RP23-395J7 on chr... 40 5.3
61emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chr... 40 5.3
62emb|CR954961.8| Mouse DNA sequence from clone RP23-145L13 on chr... 40 5.3
63emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on ch... 40 5.3
64emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chro... 40 5.3
65emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chro... 40 5.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 354      acctgcaactaaaaccgcgagttgctgaggaatgtgaccatgca 397
                |||||| |||||||| | ||||||||||||||||| ||||||||
Sbjct: 25928211 acctgctactaaaactgtgagttgctgaggaatgtaaccatgca 25928168



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                ||||||||||||||| ||||||||
Sbjct: 12739476 gtatgcattgatttccgagatttg 12739453
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>dbj|AP003568.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0017B12
          Length = 157424

 Score = 56.0 bits (28), Expect = 9e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 354   acctgcaactaaaaccgcgagttgctgaggaatgtgaccatgca 397
             |||||| |||||||| | ||||||||||||||||| ||||||||
Sbjct: 83309 acctgctactaaaactgtgagttgctgaggaatgtaaccatgca 83266
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                ||||||||||||||||||||||||
Sbjct: 11043587 gtatgcattgatttcagagatttg 11043564



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                ||||||||||||||||| ||||||
Sbjct: 13393010 gtatgcattgatttcagggatttg 13392987
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>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1116_C03
          Length = 112383

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||||||||||||
Sbjct: 69394 gtatgcattgatttcagagatttg 69371
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>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
            clone:OSJNBa0004P20
          Length = 160410

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 329  gtatgcattgatttcagagatttg 352
            ||||||||||||||||||||||||
Sbjct: 2394 gtatgcattgatttcagagatttg 2371
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>gb|AC006036.3| Homo sapiens BAC clone RP11-215P16 from 7, complete sequence
          Length = 156840

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 298    cagaatggtacaacagccaca 318
              |||||||||||||||||||||
Sbjct: 156011 cagaatggtacaacagccaca 155991
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>gb|AC121903.2| Mus musculus BAC clone RP24-174G24 from 18, complete sequence
          Length = 172114

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 35     aaaacccccaaagatgaacacagag 59
              |||||||||||||| ||||||||||
Sbjct: 152717 aaaacccccaaagaagaacacagag 152693
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>gb|AC108030.4| Homo sapiens BAC clone RP11-100C9 from 4, complete sequence
          Length = 147091

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 12    gaattgaagggattttagaat 32
             |||||||||||||||||||||
Sbjct: 38664 gaattgaagggattttagaat 38644
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>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete
              sequence
          Length = 224461

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 20     gggattttagaattcaaaacc 40
              |||||||||||||||||||||
Sbjct: 189723 gggattttagaattcaaaacc 189703
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>gb|AC148012.5| Mus musculus BAC clone RP23-174D18 from 18, complete sequence
          Length = 226568

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 35    aaaacccccaaagatgaacacagag 59
             |||||||||||||| ||||||||||
Sbjct: 48962 aaaacccccaaagaagaacacagag 48938
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>ref|XM_475025.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3498

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  tgcattgatttcagagattt 351
            ||||||||||||||||||||
Sbjct: 1492 tgcattgatttcagagattt 1511
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>ref|XM_471288.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1914

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 332  tgcattgatttcagagattt 351
            ||||||||||||||||||||
Sbjct: 1039 tgcattgatttcagagattt 1058
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             |||||||||||||| |||||||||
Sbjct: 92593 gtatgcattgattttagagatttg 92616
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>gb|BC077893.1| Xenopus laevis MGC80709 protein, mRNA (cDNA clone MGC:80709
            IMAGE:5511725), complete cds
          Length = 2037

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 176  tacaggaacaaaactgcaaa 195
            ||||||||||||||||||||
Sbjct: 1405 tacaggaacaaaactgcaaa 1424
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>gb|AC132490.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0570A02,
             complete sequence
          Length = 146541

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   tgcattgatttcagagattt 351
             ||||||||||||||||||||
Sbjct: 98120 tgcattgatttcagagattt 98139
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>emb|CR954964.4| Mouse DNA sequence from clone RP24-201A22 on chromosome X, complete
             sequence
          Length = 59913

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 30204 atgctgaagaagcattctag 30185
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>ref|XM_733144.1| Plasmodium chabaudi chabaudi hypothetical protein (PC302353.00.0)
           partial mRNA
          Length = 786

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 165 ttacaaaagaatacaggaacaaaa 188
           |||||||| |||||||||||||||
Sbjct: 403 ttacaaaataatacaggaacaaaa 426
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>ref|XM_738904.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000132.02.0)
           partial mRNA
          Length = 702

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 165 ttacaaaagaatacaggaacaaaa 188
           |||||||| |||||||||||||||
Sbjct: 403 ttacaaaataatacaggaacaaaa 426
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>emb|BX842606.1|OSJN00297 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1292H11, complete
             sequence
          Length = 152632

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||| ||||||||
Sbjct: 31765 gtatgcattgatttccgagatttg 31788
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>emb|AL731636.3|OSJN00281 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0093G06,
             complete sequence
          Length = 127420

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 332   tgcattgatttcagagattt 351
             ||||||||||||||||||||
Sbjct: 53816 tgcattgatttcagagattt 53797
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>emb|AL662989.3|OSJN00190 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091C12,
              complete sequence
          Length = 138715

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    tgcattgatttcagagattt 351
              ||||||||||||||||||||
Sbjct: 125691 tgcattgatttcagagattt 125672
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>emb|BX510641.9| Zebrafish DNA sequence from clone CH211-106M9 in linkage group 14,
             complete sequence
          Length = 161300

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    tataataaaatgctgaagaa 88
             ||||||||||||||||||||
Sbjct: 63294 tataataaaatgctgaagaa 63275
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>emb|CR406732.1| Gallus gallus finished cDNA, clone ChEST989n3
          Length = 1029

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 aacaaaactgcaaaactgtt 201
           ||||||||||||||||||||
Sbjct: 326 aacaaaactgcaaaactgtt 345
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>emb|BX927321.6| Mouse DNA sequence from clone RP23-144M4 on chromosome X, complete
             sequence
          Length = 233474

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 90641 atgctgaagaagcattctag 90660
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>emb|BX936287.9| Mouse DNA sequence from clone RP23-221M16 on chromosome X, complete
              sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgaagaagcattctag 97
              ||||||||||||||||||||
Sbjct: 136057 atgctgaagaagcattctag 136076



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   atgctgaagaagcattctag 97
            ||||||||||||||||||||
Sbjct: 5258 atgctgaagaagcattctag 5277
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>emb|BX936348.7| Mouse DNA sequence from clone RP23-348D19 on chromosome X, complete
             sequence
          Length = 62362

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 39005 atgctgaagaagcattctag 39024
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>emb|BX936354.6| Mouse DNA sequence from clone RP23-354D7 on chromosome X, complete
             sequence
          Length = 72633

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 29710 atgctgaagaagcattctag 29729
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     tgcattgatttcagagattt 351
               ||||||||||||||||||||
Sbjct: 9527573 tgcattgatttcagagattt 9527554



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     tgcattgatttcagagattt 351
               ||||||||||||||||||||
Sbjct: 8869507 tgcattgatttcagagattt 8869488



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 329     gtatgcattgatttcagagatttg 352
               ||||||||||||||| ||||||||
Sbjct: 1372741 gtatgcattgatttccgagatttg 1372764
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 20217016 gtatgcattgattttagagatttg 20217039



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 17259748 gtatgcattgattttagagatttg 17259771



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      tgcattgatttcagagattt 351
                ||||||||||||||||||||
Sbjct: 14369110 tgcattgatttcagagattt 14369129
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 11521195 gtatgcattgattttagagatttg 11521172
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                ||||||||||||||| ||||||||
Sbjct: 19970451 gtatgcattgatttccgagatttg 19970428



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 10700471 gtatgcattgattttagagatttg 10700494



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 329     gtatgcattgatttcagagatttg 352
               |||||||||||||| |||||||||
Sbjct: 4868539 gtatgcattgattttagagatttg 4868516



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 332     tgcattgatttcagagattt 351
               ||||||||||||||||||||
Sbjct: 2728045 tgcattgatttcagagattt 2728026



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 332     tgcattgatttcagagattt 351
               ||||||||||||||||||||
Sbjct: 1963986 tgcattgatttcagagattt 1964005
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 16128614 gtatgcattgattttagagatttg 16128591



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 15756890 gtatgcattgattttagagatttg 15756913
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      tgcattgatttcagagattt 351
                ||||||||||||||||||||
Sbjct: 14018043 tgcattgatttcagagattt 14018062
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>emb|AL662940.3|OSJN00142 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0035A12,
             complete sequence
          Length = 130499

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||| ||||||||
Sbjct: 75534 gtatgcattgatttccgagatttg 75557
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>gb|AC167565.1| Mus musculus BAC clone RP24-84D8 from chromosome 14, complete sequence
          Length = 199101

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 33    tcaaaacccccaaagatgaa 52
             ||||||||||||||||||||
Sbjct: 99996 tcaaaacccccaaagatgaa 99977
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>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0038F09
          Length = 166568

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             |||||||||||||| |||||||||
Sbjct: 98947 gtatgcattgattttagagatttg 98924
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>dbj|AP004667.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0433E10
          Length = 144643

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    gtatgcattgatttcagagatttg 352
              ||||||||||||||| ||||||||
Sbjct: 138629 gtatgcattgatttccgagatttg 138606
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>dbj|AP005741.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470H09
          Length = 141257

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 332    tgcattgatttcagagattt 351
              ||||||||||||||||||||
Sbjct: 106326 tgcattgatttcagagattt 106307
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>dbj|AP005477.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0039F24
          Length = 132107

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||| ||||||||
Sbjct: 92997 gtatgcattgatttccgagatttg 92974
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>dbj|AP004811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0019A05
          Length = 144255

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||| ||||||||
Sbjct: 40253 gtatgcattgatttccgagatttg 40230
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>dbj|AP005752.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0075N02
          Length = 186945

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 329    gtatgcattgatttcagagatttg 352
              |||||||||||||| |||||||||
Sbjct: 154747 gtatgcattgattttagagatttg 154770
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>emb|BX664729.3| Mouse DNA sequence from clone RP24-251C18 on chromosome X, complete
             sequence
          Length = 52210

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 51731 atgctgaagaagcattctag 51750
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>dbj|AP005861.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0025E03
          Length = 156806

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||||| ||||||
Sbjct: 64354 gtatgcattgatttcagggatttg 64331
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0680F05
          Length = 185495

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   tgcattgatttcagagattt 351
             ||||||||||||||||||||
Sbjct: 89184 tgcattgatttcagagattt 89203
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>dbj|AP005618.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0509D04
          Length = 140666

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 332    tgcattgatttcagagattt 351
              ||||||||||||||||||||
Sbjct: 113021 tgcattgatttcagagattt 113040
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>dbj|AP004646.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1122_A12
          Length = 149011

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             |||||||||||||| |||||||||
Sbjct: 27793 gtatgcattgattttagagatttg 27770
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>dbj|AP005440.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0056D04
          Length = 158118

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             |||||||||||||| |||||||||
Sbjct: 73333 gtatgcattgattttagagatttg 73310
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>emb|AL672179.9| Mouse DNA sequence from clone RP23-468C6 on chromosome X, complete
            sequence
          Length = 181910

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   atgctgaagaagcattctag 97
            ||||||||||||||||||||
Sbjct: 1521 atgctgaagaagcattctag 1540
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>dbj|AP005521.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0477F03
          Length = 176120

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             ||||||||||||||| ||||||||
Sbjct: 42302 gtatgcattgatttccgagatttg 42279
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>dbj|AP004158.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1118_F05
          Length = 134247

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 329    gtatgcattgatttcagagatttg 352
              |||||||||||||| |||||||||
Sbjct: 128111 gtatgcattgattttagagatttg 128134
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>gb|AC005510.3|AC005510 Homo sapiens chromosome 4 clone B368A9 map 4q25, complete sequence
          Length = 168468

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    cagcagcacaatctctgtgg 231
              ||||||||||||||||||||
Sbjct: 138094 cagcagcacaatctctgtgg 138075
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>dbj|AP002008.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-794P6, complete
              sequences
          Length = 194973

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 66     cattataataaaatgctgaa 85
              ||||||||||||||||||||
Sbjct: 117970 cattataataaaatgctgaa 117989
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 11600384 gtatgcattgattttagagatttg 11600361
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 20143230 gtatgcattgattttagagatttg 20143253



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 329      gtatgcattgatttcagagatttg 352
                |||||||||||||| |||||||||
Sbjct: 17214119 gtatgcattgattttagagatttg 17214142



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 332      tgcattgatttcagagattt 351
                ||||||||||||||||||||
Sbjct: 14323392 tgcattgatttcagagattt 14323411
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>emb|AL844592.6| Mouse DNA sequence from clone RP23-244J24 on chromosome 2, complete
              sequence
          Length = 197462

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                              
Query: 25     tttagaattcaaaacccccaaagatgaacaca 56
              ||||||||||| ||||||||||| ||||||||
Sbjct: 164045 tttagaattcagaacccccaaag-tgaacaca 164015
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>emb|AL662971.2|OSJN00172 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061A09,
            complete sequence
          Length = 160462

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 332  tgcattgatttcagagattt 351
            ||||||||||||||||||||
Sbjct: 9679 tgcattgatttcagagattt 9660
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>emb|AL732645.4|CNS08C9K Oryza sativa chromosome 12, . BAC OSJNBb0090H23 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134370

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 332   tgcattgatttcagagattt 351
             ||||||||||||||||||||
Sbjct: 76314 tgcattgatttcagagattt 76333
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>emb|AL713944.3|CNS07YPN Oryza sativa chromosome 12, . BAC OJ1116_G12 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 152862

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 329   gtatgcattgatttcagagatttg 352
             |||||||||||||| |||||||||
Sbjct: 81250 gtatgcattgattttagagatttg 81273
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>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 154826

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    gtatgcattgatttcagagatttg 352
              |||||||||||||| |||||||||
Sbjct: 143621 gtatgcattgattttagagatttg 143598
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>emb|CR354601.14| Mouse DNA sequence from clone RP23-395J7 on chromosome X, complete
             sequence
          Length = 96754

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 33114 atgctgaagaagcattctag 33133
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>emb|CR954967.11| Mouse DNA sequence from clone RP24-329J6 on chromosome X, complete
              sequence
          Length = 240890

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgaagaagcattctag 97
              ||||||||||||||||||||
Sbjct: 174603 atgctgaagaagcattctag 174622



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 83600 atgctgaagaagcattctag 83619
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>emb|CR954961.8| Mouse DNA sequence from clone RP23-145L13 on chromosome X, complete
             sequence
          Length = 59596

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 50209 atgctgaagaagcattctag 50228
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>emb|CR954969.10| Mouse DNA sequence from clone RP23-332J14 on chromosome X, complete
              sequence
          Length = 204157

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     atgctgaagaagcattctag 97
              ||||||||||||||||||||
Sbjct: 122455 atgctgaagaagcattctag 122436



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 32871 atgctgaagaagcattctag 32852
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>emb|AL670953.5| Mouse DNA sequence from clone RP23-233H9 on chromosome X, complete
              sequence
          Length = 209986

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgaagaagcattctag 97
              ||||||||||||||||||||
Sbjct: 136807 atgctgaagaagcattctag 136826
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>emb|AL672050.7| Mouse DNA sequence from clone RP23-315F2 on chromosome X, complete
              sequence
          Length = 174151

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 78     atgctgaagaagcattctag 97
              ||||||||||||||||||||
Sbjct: 169811 atgctgaagaagcattctag 169830



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    atgctgaagaagcattctag 97
             ||||||||||||||||||||
Sbjct: 53778 atgctgaagaagcattctag 53797


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,183,812
Number of Sequences: 3902068
Number of extensions: 4183812
Number of successful extensions: 84145
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 83401
Number of HSP's gapped (non-prelim): 745
length of query: 397
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 375
effective length of database: 17,147,199,772
effective search space: 6430199914500
effective search space used: 6430199914500
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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