Clone Name | rbastl54h08 |
---|---|
Clone Library Name | barley_pub |
>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase| (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT) (Lysophosphatidic acid acyltransferase) (LPAAT) Length = 303 Score = 29.3 bits (64), Expect = 2.5 Identities = 17/63 (26%), Positives = 27/63 (42%) Frame = +1 Query: 94 GRHASKMYTKQTQLGKSWSFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIE 273 G A K+ + K + I+ T+P A + + H ++K + PVP V I Sbjct: 228 GEFAEKVRDQMVDTLKEIGYSPAINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSIS 287 Query: 274 LDV 282 DV Sbjct: 288 NDV 290
>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556| Length = 305 Score = 28.5 bits (62), Expect = 4.2 Identities = 15/35 (42%), Positives = 16/35 (45%) Frame = -1 Query: 349 RAEAARDIHRECHHE*LFCELRGRRVLWGQGAPGG 245 R AAR H+ CH L R R LW G GG Sbjct: 245 RRAAARVRHQRCHRAGLRSPPRTREPLWSLGPSGG 279
>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC| 1.13.11.12) Length = 941 Score = 28.1 bits (61), Expect = 5.5 Identities = 14/46 (30%), Positives = 21/46 (45%) Frame = +1 Query: 148 SFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIELDVP 285 S +L++ + A + T+HS H DDH V + DVP Sbjct: 131 SLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVP 176
>ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) (BDH| I) Length = 389 Score = 28.1 bits (61), Expect = 5.5 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = +1 Query: 184 ASAFQLSGTLHSLGHDRKWDDHPV 255 AS+ ++G L SLG DRKW HP+ Sbjct: 247 ASSLAINGLL-SLGKDRKWSCHPM 269
>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)| Length = 210 Score = 27.7 bits (60), Expect = 7.2 Identities = 26/84 (30%), Positives = 34/84 (40%) Frame = +2 Query: 89 YMDDMLQKCTPNKHN*VNPGHSTSRSVRSPFRRQLFSYQELYTALDMTVNGMTTRCPLSP 268 YM DM C N HS+S+S RS R + S+ +Y+A V C L P Sbjct: 107 YMHDMFSPCISGV---ANSQHSSSQSPRSHCRSLVPSFIAIYSA--SVVLCALISCFLDP 161 Query: 269 *NSTSPKLAEELLMVAFTMNVTSC 340 +T P NVT+C Sbjct: 162 YETTLP-----------LTNVTNC 174
>B2MG_PIG (Q07717) Beta-2-microglobulin precursor (Lactollin)| Length = 118 Score = 27.7 bits (60), Expect = 7.2 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Frame = +1 Query: 97 RHASKMYTKQTQLG--KSWSFYLQISQVTVPASAFQLSGTLHSLGHDR----KWD-DH 249 ++ KM +Q+ L K WSFYL + P + Q S + + D+ KWD DH Sbjct: 61 KNGEKMNAEQSDLSFSKDWSFYLLVHTEFTPNAVDQYSCRVKHVTLDKPKIVKWDRDH 118 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,661,936 Number of Sequences: 219361 Number of extensions: 1038160 Number of successful extensions: 2637 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2593 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2637 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)