ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyl... 29 2.5
2YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon ... 28 4.2
3LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precur... 28 5.5
4ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1... 28 5.5
5CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydro... 28 7.2
6B2MG_PIG (Q07717) Beta-2-microglobulin precursor (Lactollin) 28 7.2

>PLSC_YEAST (P33333) Probable 1-acyl-sn-glycerol-3-phosphate acyltransferase|
           (EC 2.3.1.51) (1-AGP acyltransferase) (1-AGPAT)
           (Lysophosphatidic acid acyltransferase) (LPAAT)
          Length = 303

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 17/63 (26%), Positives = 27/63 (42%)
 Frame = +1

Query: 94  GRHASKMYTKQTQLGKSWSFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIE 273
           G  A K+  +     K   +   I+  T+P  A + +   H    ++K  + PVP V I 
Sbjct: 228 GEFAEKVRDQMVDTLKEIGYSPAINDTTLPPQAIEYAALQHDKKVNKKIKNEPVPSVSIS 287

Query: 274 LDV 282
            DV
Sbjct: 288 NDV 290



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>YT32_STRFR (P20185) Hypothetical 32.6 kDa protein in transposon Tn4556|
          Length = 305

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 15/35 (42%), Positives = 16/35 (45%)
 Frame = -1

Query: 349 RAEAARDIHRECHHE*LFCELRGRRVLWGQGAPGG 245
           R  AAR  H+ CH   L    R R  LW  G  GG
Sbjct: 245 RRAAARVRHQRCHRAGLRSPPRTREPLWSLGPSGG 279



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>LOXC2_ORYSA (Q84YK8) Probable lipoxygenase 8, chloroplast precursor (EC|
           1.13.11.12)
          Length = 941

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 148 SFYLQISQVTVPASAFQLSGTLHSLGHDRKWDDHPVPPVPIELDVP 285
           S +L++    + A   +   T+HS  H    DDH V     + DVP
Sbjct: 131 SLFLELVSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVP 176



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>ADHA_CLOAB (Q04944) NADH-dependent butanol dehydrogenase A (EC 1.1.1.-) (BDH|
           I)
          Length = 389

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/24 (54%), Positives = 17/24 (70%)
 Frame = +1

Query: 184 ASAFQLSGTLHSLGHDRKWDDHPV 255
           AS+  ++G L SLG DRKW  HP+
Sbjct: 247 ASSLAINGLL-SLGKDRKWSCHPM 269



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>CUTI_PHYCP (P41754) Putative cutinase (EC 3.1.1.74) (Cutin hydrolase)|
          Length = 210

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 26/84 (30%), Positives = 34/84 (40%)
 Frame = +2

Query: 89  YMDDMLQKCTPNKHN*VNPGHSTSRSVRSPFRRQLFSYQELYTALDMTVNGMTTRCPLSP 268
           YM DM   C        N  HS+S+S RS  R  + S+  +Y+A    V      C L P
Sbjct: 107 YMHDMFSPCISGV---ANSQHSSSQSPRSHCRSLVPSFIAIYSA--SVVLCALISCFLDP 161

Query: 269 *NSTSPKLAEELLMVAFTMNVTSC 340
             +T P             NVT+C
Sbjct: 162 YETTLP-----------LTNVTNC 174



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>B2MG_PIG (Q07717) Beta-2-microglobulin precursor (Lactollin)|
          Length = 118

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
 Frame = +1

Query: 97  RHASKMYTKQTQLG--KSWSFYLQISQVTVPASAFQLSGTLHSLGHDR----KWD-DH 249
           ++  KM  +Q+ L   K WSFYL +     P +  Q S  +  +  D+    KWD DH
Sbjct: 61  KNGEKMNAEQSDLSFSKDWSFYLLVHTEFTPNAVDQYSCRVKHVTLDKPKIVKWDRDH 118


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,661,936
Number of Sequences: 219361
Number of extensions: 1038160
Number of successful extensions: 2637
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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