>SPL15_ARATH (Q9M2Q6) Squamosa promoter-binding-like protein 15|
          Length = 354

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +2

Query: 122 LGPVK*SFTPPKSMRDGSSTYTTFPATITRTETFSASLLSILCNGF 259
           + PV+ +      +  GSS++TT P  I    T S+  LS+L N +
Sbjct: 185 INPVRETHPHMNVLSHGSSSFTTCPEMINNNSTDSSCALSLLSNSY 230

>CHIA1_BACCI (P20533) Chitinase A1 precursor (EC 3.2.1.14)|
          Length = 699

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -1

Query: 283 RTWDACARKAIAEYAQKTGGESFSSSYGCWES 188
           R WD CA+    +Y   TGG    SS G WE+
Sbjct: 340 RGWDGCAQAGNGQYQTCTGG----SSVGTWEA 367

>RDC1_RAT (O89039) G-protein coupled receptor RDC1 homolog (RDC-1) (Chemokine|
           orphan receptor 1)
          Length = 362

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 121 YSCDPQVVIFTYLYSTQQLSKYMCAVFVIVLIFIEAN 11
           ++C  + V+FT L+ TQ LS   C V  ++  FI  N
Sbjct: 285 FTCQLENVLFTALHVTQCLSLVHCCVNPVLYSFINRN 321

>RDC1_MOUSE (P56485) G-protein coupled receptor RDC1 homolog (Chemokine orphan|
           receptor 1)
          Length = 362

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 121 YSCDPQVVIFTYLYSTQQLSKYMCAVFVIVLIFIEAN 11
           ++C  + V+FT L+ TQ LS   C V  ++  FI  N
Sbjct: 285 FTCQLENVLFTALHVTQCLSLVHCCVNPVLYSFINRN 321

>DNAA_MYCPA (Q9L7L7) Chromosomal replication initiator protein dnaA|
          Length = 509

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 135 NEVSRHQKA*ETDQAPTQLSQQP*LELKLSPP 230
           NE+ RH +A  TD    +L QQ  L ++++PP
Sbjct: 72  NEIERHLRAPITDALSRRLGQQIQLGVRIAPP 103

>DNAA_MYCAV (P49990) Chromosomal replication initiator protein dnaA|
          Length = 508

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +3

Query: 135 NEVSRHQKA*ETDQAPTQLSQQP*LELKLSPP 230
           NE+ RH +A  TD    +L QQ  L ++++PP
Sbjct: 71  NEIERHLRAPITDALSRRLGQQIQLGVRIAPP 102

>SYKM_YEAST (P32048) Lysyl-tRNA synthetase, mitochondrial precursor (EC|
           6.1.1.6) (Lysine--tRNA ligase) (LysRS)
          Length = 576

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +2

Query: 179 TYTTFPATITRTETFSASLLSILCNGFARTSVPRPCDFSQRH 304
           TY +    +TRTE     L++ L   F  T +P P  FS+ H
Sbjct: 325 TYMSMDDIVTRTEDLFKFLITNLQKFFQDTRLPVPKTFSELH 366

>CCG6_NEUCR (Q01302) Clock-controlled protein 6|
          Length = 142

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 10/54 (18%)
 Frame = +2

Query: 152 PKSMRDGSSTYTTF----------PATITRTETFSASLLSILCNGFARTSVPRP 283
           P  +  G +TYT            P T+T+    ++S++   C G+  +++P P
Sbjct: 38  PTEITHGGNTYTVTEATTLTISDCPCTVTKPIITTSSVICHSCTGYVNSTIPAP 91

>ATR_DROME (Q9VXG8) Serine/threonine-protein kinase ATR (EC 2.7.11.1) (Ataxia|
           telangiectasia and Rad3-related protein homolog) (ATR
           homolog) (dATR) (Meiotic protein 41)
          Length = 2517

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/36 (44%), Positives = 19/36 (52%), Gaps = 4/36 (11%)
 Frame = -3

Query: 269 LCAQSHCRVCS--EDWRRKFQ--FELWLLGKLCRCL 174
           LC +     CS   +   KFQ  F LWLL KL +CL
Sbjct: 34  LCQEPSLISCSLVRELHNKFQDTFLLWLLNKLAKCL 69

>GLNA3_PHAVU (P00965) Glutamine synthetase N-1 (EC 6.3.1.2) (Gln isozyme gamma)|
           (Glutamate--ammonia ligase)
          Length = 356

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 9/72 (12%)
 Frame = +2

Query: 116 TVLGPVK*SFTPPKSMRDGSST---------YTTFPATITRTETFSASLLSILCNGFART 268
           T+ GPVK     PK   DGSST            +P TI R      + + ++C+ +   
Sbjct: 39  TLSGPVKDPSKLPKWNYDGSSTGQAPGQDSEVILYPQTIFRDPFRRGNNILVMCDAYTPA 98

Query: 269 SVPRPCDFSQRH 304
             P P   ++RH
Sbjct: 99  GEPIPT--NKRH 108

>ENV_HV1Z6 (P04580) Envelope polyprotein GP160 precursor [Contains: Exterior|
           membrane glycoprotein (GP120); Transmembrane
           glycoprotein (GP41)]
          Length = 855

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = -3

Query: 272 RLCAQSHCRVCSEDWRRKFQFELWLLGKL 186
           ++  Q+HC +  EDW +  Q     LG L
Sbjct: 325 KIIGQAHCNISKEDWNKTLQRVAIKLGNL 353

>MTD2_HERAU (P25265) Modification methylase HgiDII (EC 2.1.1.37)|
           (Cytosine-specific methyltransferase HgiDII) (M.HgiDII)
          Length = 354

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -1

Query: 310 EPMSLREIAR-----TWDACARKAIAEYAQKTGGESFSSSYGCWE 191
           E ++LR I       TW     + IAE  +K  GES+ S YG  E
Sbjct: 216 EDINLRRIQHSVPGGTWADWPEELIAECHKKESGESYGSVYGRME 260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,660,511
Number of Sequences: 219361
Number of extensions: 944794
Number of successful extensions: 2474
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2474
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)