>ref|XM_483828.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4423

 Score =  135 bits (68), Expect = 1e-28
 Identities = 140/164 (85%)
 Strand = Plus / Minus

                                                                        
Query: 170  ggatcaagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgcc 229
            |||| ||||||| || ||| ||||||| |||||||| ||||||||||||||  |||| ||
Sbjct: 4109 ggattaagcacccacgcaattttcccaacaaccatagctcgaactgaaactgcctccacc 4050

                                                                        
Query: 230  agtcttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgat 289
            |||||  ||||||||||| |||||  ||||||| ||||| |||||||||||||| || ||
Sbjct: 4049 agtctgttgagcatactcagcaattactttgcgggcacacgcgtcccacgtcctcgcaat 3990

                                                        
Query: 290  ttctcgcagcgacatgggctcagctagaccccgcagtaatatgc 333
            |||||  || |||||||||||||||| |||||| || |||||||
Sbjct: 3989 ttctcttagtgacatgggctcagctaaaccccgaagcaatatgc 3946

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score =  135 bits (68), Expect = 1e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                            
Query: 170      ggatcaagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgcc 229
                |||| ||||||| || ||| ||||||| |||||||| ||||||||||||||  |||| ||
Sbjct: 28288149 ggattaagcacccacgcaattttcccaacaaccatagctcgaactgaaactgcctccacc 28288208

                                                                            
Query: 230      agtcttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgat 289
                |||||  ||||||||||| |||||  ||||||| ||||| |||||||||||||| || ||
Sbjct: 28288209 agtctgttgagcatactcagcaattactttgcgggcacacgcgtcccacgtcctcgcaat 28288268

                                                            
Query: 290      ttctcgcagcgacatgggctcagctagaccccgcagtaatatgc 333
                |||||  || |||||||||||||||| |||||| || |||||||
Sbjct: 28288269 ttctcttagtgacatgggctcagctaaaccccgaagcaatatgc 28288312

>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0044E16
          Length = 153296

 Score =  135 bits (68), Expect = 1e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                         
Query: 170   ggatcaagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgcc 229
             |||| ||||||| || ||| ||||||| |||||||| ||||||||||||||  |||| ||
Sbjct: 16955 ggattaagcacccacgcaattttcccaacaaccatagctcgaactgaaactgcctccacc 17014

                                                                         
Query: 230   agtcttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgat 289
             |||||  ||||||||||| |||||  ||||||| ||||| |||||||||||||| || ||
Sbjct: 17015 agtctgttgagcatactcagcaattactttgcgggcacacgcgtcccacgtcctcgcaat 17074

                                                         
Query: 290   ttctcgcagcgacatgggctcagctagaccccgcagtaatatgc 333
             |||||  || |||||||||||||||| |||||| || |||||||
Sbjct: 17075 ttctcttagtgacatgggctcagctaaaccccgaagcaatatgc 17118

>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0705A05
          Length = 143765

 Score =  135 bits (68), Expect = 1e-28
 Identities = 140/164 (85%)
 Strand = Plus / Plus

                                                                         
Query: 170   ggatcaagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgcc 229
             |||| ||||||| || ||| ||||||| |||||||| ||||||||||||||  |||| ||
Sbjct: 79964 ggattaagcacccacgcaattttcccaacaaccatagctcgaactgaaactgcctccacc 80023

                                                                         
Query: 230   agtcttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgat 289
             |||||  ||||||||||| |||||  ||||||| ||||| |||||||||||||| || ||
Sbjct: 80024 agtctgttgagcatactcagcaattactttgcgggcacacgcgtcccacgtcctcgcaat 80083

                                                         
Query: 290   ttctcgcagcgacatgggctcagctagaccccgcagtaatatgc 333
             |||||  || |||||||||||||||| |||||| || |||||||
Sbjct: 80084 ttctcttagtgacatgggctcagctaaaccccgaagcaatatgc 80127

>dbj|AK071244.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088K02, full
            insert sequence
          Length = 4423

 Score =  135 bits (68), Expect = 1e-28
 Identities = 140/164 (85%)
 Strand = Plus / Minus

                                                                        
Query: 170  ggatcaagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgcc 229
            |||| ||||||| || ||| ||||||| |||||||| ||||||||||||||  |||| ||
Sbjct: 4109 ggattaagcacccacgcaattttcccaacaaccatagctcgaactgaaactgcctccacc 4050

                                                                        
Query: 230  agtcttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgat 289
            |||||  ||||||||||| |||||  ||||||| ||||| |||||||||||||| || ||
Sbjct: 4049 agtctgttgagcatactcagcaattactttgcgggcacacgcgtcccacgtcctcgcaat 3990

                                                        
Query: 290  ttctcgcagcgacatgggctcagctagaccccgcagtaatatgc 333
            |||||  || |||||||||||||||| |||||| || |||||||
Sbjct: 3989 ttctcttagtgacatgggctcagctaaaccccgaagcaatatgc 3946

>gb|BT016662.1| Zea mays clone Contig495 mRNA sequence
          Length = 1657

 Score =  131 bits (66), Expect = 2e-27
 Identities = 117/134 (87%)
 Strand = Plus / Minus

                                                                        
Query: 189  ctttcccagcaaccataactcgaactgaaactttctccgccagtcttctgagcatactct 248
            ||||||||||||||||| ||||| ||||||||  |||| || || | ||| |||||||||
Sbjct: 1419 ctttcccagcaaccatagctcgagctgaaactgcctcctcctgtttgctgggcatactct 1360

                                                                        
Query: 249  gcaatggctttgcgcgcacaagcgtcccacgtccttgcgatttctcgcagcgacatgggc 308
            |||||  |||| || || ||||| |||||||||||||||||||||||||  |||||||||
Sbjct: 1359 gcaatcactttccgggcgcaagcatcccacgtccttgcgatttctcgcaatgacatgggc 1300

                          
Query: 309  tcagctagaccccg 322
            ||||||||||||||
Sbjct: 1299 tcagctagaccccg 1286

>gb|AY107237.1| Zea mays PCO103441 mRNA sequence
          Length = 633

 Score =  129 bits (65), Expect = 7e-27
 Identities = 128/149 (85%)
 Strand = Plus / Minus

                                                                       
Query: 174 caagcacctacacaactttcccagcaaccataactcgaactgaaactttctccgccagtc 233
           ||||| ||||| || ||||||||||||||||| ||||| ||||||||  |||| || || 
Sbjct: 374 caagcgcctacgcagctttcccagcaaccatagctcgagctgaaactgcctcctccggtt 315

                                                                       
Query: 234 ttctgagcatactctgcaatggctttgcgcgcacaagcgtcccacgtccttgcgatttct 293
           | ||| ||||||||||  ||  ||||||| || ||||| ||||| |||||||||||||||
Sbjct: 314 tgctgggcatactctgtgatcactttgcgagcgcaagcatcccatgtccttgcgatttct 255

                                        
Query: 294 cgcagcgacatgggctcagctagaccccg 322
           ||||| |||||||||||||||||||||||
Sbjct: 254 cgcagtgacatgggctcagctagaccccg 226

>gb|AC166995.2| Mus musculus BAC clone RP23-255N15 from chromosome 16, complete
             sequence
          Length = 170106

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ctttcccagcaaccataact 208
             ||||||||||||||||||||
Sbjct: 66640 ctttcccagcaaccataact 66621

>gb|AC136743.5| Mus musculus chromosome 9, clone RP23-149D5, complete sequence
          Length = 213343

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    actgttgtgttgaataaagg 86
             ||||||||||||||||||||
Sbjct: 14506 actgttgtgttgaataaagg 14487

>gb|AC133653.4| Mus musculus BAC clone RP24-320J12 from chromosome 7, complete sequence
          Length = 144233

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    cacaaatacagcacacatgtattt 61
             ||||||| ||||||||||||||||
Sbjct: 39210 cacaaatccagcacacatgtattt 39187

>gb|AC146163.3| Pan troglodytes BAC clone RP43-24D16 from 7, complete sequence
          Length = 162475

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    ctttgaatttgctttcatag 357
              ||||||||||||||||||||
Sbjct: 116918 ctttgaatttgctttcatag 116899

>gb|AC007316.4| Homo sapiens BAC clone RP11-356B17 from 7, complete sequence
          Length = 106392

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   ctttgaatttgctttcatag 357
             ||||||||||||||||||||
Sbjct: 31639 ctttgaatttgctttcatag 31620

>emb|AL590807.13| Human DNA sequence from clone RP11-325L2 on chromosome 13 Contains an
             ADP-ribosylation factor pseudogene, complete sequence
          Length = 178914

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tttgaatttgctttcataga 358
             ||||||||||||||||||||
Sbjct: 92817 tttgaatttgctttcataga 92836

>emb|AL353692.14| Human DNA sequence from clone RP11-63K6 on chromosome 6 Contains a novel
              pseudogene, the 5' end of the MDN1 gene for midasin homolog
              (yeast), the CASP8AP2 gene for CASP8 associated protein 2,
              a ribosomal protein L22 (RPL22) pseudogene, a novel
              pseudogene similar to G protein pathway suppressor 1
              (GPS1), the gene for connexin 62 (CX62), a novel gene, the
              3' part of the BACH2 gene for BTB and CNC homology 1 basic
              leucine zipper transcription factor 2 and four CpG islands,
              complete sequence
          Length = 137184

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    ctttgaatttgctttcatag 357
              ||||||||||||||||||||
Sbjct: 112527 ctttgaatttgctttcatag 112546

>gb|AC158781.4| Mus musculus chromosome 7, clone RP23-264H19, complete sequence
          Length = 208419

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 38    cacaaatacagcacacatgtattt 61
             ||||||| ||||||||||||||||
Sbjct: 82000 cacaaatccagcacacatgtattt 81977

>gb|AC117395.5| Homo sapiens 3 BAC RP11-651P23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 172715

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    ctttgaatttgctttcatag 357
              ||||||||||||||||||||
Sbjct: 130569 ctttgaatttgctttcatag 130550

>gb|AC008737.11| Homo sapiens chromosome 19 clone CTD-2538G9, complete sequence
          Length = 248281

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    tttgaatttgctttcataga 358
              ||||||||||||||||||||
Sbjct: 247696 tttgaatttgctttcataga 247677

>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence
          Length = 174034

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 339  tttgaatttgctttcataga 358
            ||||||||||||||||||||
Sbjct: 2982 tttgaatttgctttcataga 2963

>gb|AC117486.3| Homo sapiens 3 BAC CTD-2017P13 (Cal Tech Human BAC Library D) complete
             sequence
          Length = 81510

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 339   tttgaatttgctttcataga 358
             ||||||||||||||||||||
Sbjct: 36435 tttgaatttgctttcataga 36454

>gb|AY135692.1| Mus musculus Miwi 2 protein (Miwi2) gene, complete cds
          Length = 99999

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    actgttgtgttgaataaagg 86
             ||||||||||||||||||||
Sbjct: 66010 actgttgtgttgaataaagg 66029

>emb|AL157955.5|CNS01RGE Human chromosome 14 DNA sequence BAC R-300J18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 177169

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 339    tttgaatttgctttcataga 358
              ||||||||||||||||||||
Sbjct: 151748 tttgaatttgctttcataga 151767

>emb|AL133279.7|CNS01DUM Human chromosome 14 DNA sequence BAC R-753D20 of library RPCI-11 from
            chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 197224

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 339  tttgaatttgctttcataga 358
            ||||||||||||||||||||
Sbjct: 6751 tttgaatttgctttcataga 6770

>gb|AE015927.1| Clostridium tetani E88, complete genome
          Length = 2799251

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      agttagcttctataaatata 29
               ||||||||||||||||||||
Sbjct: 1829286 agttagcttctataaatata 1829267

>emb|CT030247.6| Mouse DNA sequence from clone RP23-340G24 on chromosome 9, complete
             sequence
          Length = 218753

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    actgttgtgttgaataaagg 86
             ||||||||||||||||||||
Sbjct: 94026 actgttgtgttgaataaagg 94045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,800
Number of Sequences: 3902068
Number of extensions: 3110800
Number of successful extensions: 56084
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56021
Number of HSP's gapped (non-prelim): 63
length of query: 358
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 336
effective length of database: 17,147,199,772
effective search space: 5761459123392
effective search space used: 5761459123392
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)