Clone Name | rbastl54g07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34) ... | 28 | 4.5 | 2 | LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like ... | 28 | 5.9 | 3 | FREM2_LYTVA (Q9GV77) Extracellular matrix protein 3 precursor (F... | 28 | 5.9 |
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>LOX5_MESAU (P51399) Arachidonate 5-lipoxygenase (EC 1.13.11.34)| (5-lipoxygenase) (5-LO) Length = 672 Score = 28.5 bits (62), Expect = 4.5 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Frame = +2 Query: 101 KRLYNLPKGLPTYSETTAVSFSRH---EK*SQERNILTIKFVLPADGKSVAANRMAYVEH 271 KR LP+ LP +E S RH E+ QE NI + + L DG + AN+ H Sbjct: 245 KRCRELPQKLPVTTEMVECSLERHLSLEQEVQEGNIFIVDYEL-LDG--IDANKTDPCTH 301 Query: 272 GWLA 283 +LA Sbjct: 302 QFLA 305
>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)| (MtLAX5) Length = 490 Score = 28.1 bits (61), Expect = 5.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +3 Query: 21 SQTRVYTIFATKIVNDTNAYKPLPKTP 101 S T VY F ++N +NA+ LPK+P Sbjct: 279 SATAVYWAFGDMLLNHSNAFALLPKSP 305
>FREM2_LYTVA (Q9GV77) Extracellular matrix protein 3 precursor (FREM2 homolog)| Length = 3103 Score = 28.1 bits (61), Expect = 5.9 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 9 ISTNSQTRVYTIFATKIVNDTN-AYKPLPKTPSACTIYQ 122 +ST+ + + T F K + D AYKP P+ TIYQ Sbjct: 344 VSTDDRNQPITSFTQKDLRDLKIAYKPPPRDTDVQTIYQ 382 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,110,979 Number of Sequences: 219361 Number of extensions: 740808 Number of successful extensions: 1650 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1635 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1650 length of database: 80,573,946 effective HSP length: 74 effective length of database: 64,341,232 effective search space used: 1544189568 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)