ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbastl54g02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT019325.1| Zea mays clone Contig1034.F mRNA sequence 149 8e-33
2ref|XM_463780.1| Oryza sativa (japonica cultivar-group), mRNA 84 4e-13
3dbj|AK105706.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
4gb|AY103840.1| Zea mays PCO125096 mRNA sequence 84 4e-13
5ref|NM_120021.2| Arabidopsis thaliana KAK (KAKTUS) AT4G38600 (KA... 70 6e-09
6ref|NM_179236.2| Arabidopsis thaliana KAK (KAKTUS) AT4G38600 (KA... 70 6e-09
7gb|AY265959.1| Arabidopsis thaliana HECT ubiquitin-protein ligas... 70 6e-09
8tpe|BN000268.1|ATH000268 TPA: TPA_exp: Arabidopsis thaliana mRNA... 70 6e-09
9dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
10dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
11dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic D... 64 4e-07
12gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete s... 54 3e-04
13gb|U76747.1|TAU76747 Triticum aestivum Tap mRNA, partial cds 54 3e-04
14ref|XM_460177.1| Debaryomyces hansenii CBS767 hypothetical prote... 46 0.083
15emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS... 46 0.083
16emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, ... 46 0.083
17gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana... 46 0.083
18gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana... 46 0.083
19emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 ... 46 0.083
20emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, B... 46 0.083
21gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Ho... 42 1.3
22gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-... 42 1.3
23gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hosp... 42 1.3
24gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome... 42 1.3
25dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
26gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold 42 1.3
27dbj|AB008921.2| Mus musculus mGpi1 gene, complete cds 42 1.3
28dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
29dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
30gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete se... 40 5.1
31emb|AL035555.11|HS217P22 Human DNA sequence from clone RP1-217P2... 40 5.1
32emb|AL023284.1|HS406A7 Human DNA sequence from clone RP3-406A7 o... 40 5.1
33emb|AL031173.1|DMSEG0001 Drosophila melanogaster sequence EG0001... 40 5.1
34gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell P... 40 5.1
35emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in... 40 5.1
36gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswel... 40 5.1
37gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, compl... 40 5.1
38gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, comp... 40 5.1
39gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete... 40 5.1
40gb|AC069240.23| Homo sapiens 12 BAC RP11-385N17 (Roswell Park Ca... 40 5.1
41gb|AE003520.4| Drosophila melanogaster chromosome 3L, section 65... 40 5.1
42gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 o... 40 5.1 
>gb|BT019325.1| Zea mays clone Contig1034.F mRNA sequence
          Length = 494

 Score =  149 bits (75), Expect = 8e-33
 Identities = 138/159 (86%)
 Strand = Plus / Minus

                                                                       
Query: 225 gaaagatcaaacgacccctggccttcgttgatagcataaagcagcttcttgtgcataact 284
           ||||||||||| ||||| |||||||||||||| ||||||||||| |||||  |||| |  
Sbjct: 241 gaaagatcaaatgacccttggccttcgttgatcgcataaagcagtttctttagcatgata 182

                                                                       
Query: 285 tcctttgtcgagtatggcggaagtttaagatagttggcacaagtcatgacgctaggcaga 344
            |||| || |||||||| || ||||||||||||||||| ||||||||||| ||||||| |
Sbjct: 181 gccttggtggagtatggtggtagtttaagatagttggcgcaagtcatgacactaggcaaa 122

                                                  
Query: 345 tcatcatcagcagactctgctgctccagctgcatttgaa 383
           |||||||| ||||||||||  ||||||| ||||||||||
Sbjct: 121 tcatcatctgcagactctgtcgctccagttgcatttgaa 83
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>ref|XM_463780.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 5346

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  gcataaagcagcttcttgtgcataacttcctttgtcgagtatggcggaagtttaagatag 317
            ||||||||||  |||||| |||| ||||| ||||| |||||||| || | ||||||||| 
Sbjct: 5309 gcataaagcaatttcttgcgcatcacttcttttgtggagtatggaggcaatttaagataa 5250

                                                          
Query: 318  ttggcacaagtcatgacgctaggcagatcatcatcagcagactctg 363
            || ||||| ||||| || || |||||||||||||| ||||||||||
Sbjct: 5249 ttagcacatgtcataacacttggcagatcatcatctgcagactctg 5204
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>dbj|AK105706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-E03, full
            insert sequence
          Length = 2561

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 90/106 (84%)
 Strand = Plus / Minus

                                                                        
Query: 258  gcataaagcagcttcttgtgcataacttcctttgtcgagtatggcggaagtttaagatag 317
            ||||||||||  |||||| |||| ||||| ||||| |||||||| || | ||||||||| 
Sbjct: 2120 gcataaagcaatttcttgcgcatcacttcttttgtggagtatggaggcaatttaagataa 2061

                                                          
Query: 318  ttggcacaagtcatgacgctaggcagatcatcatcagcagactctg 363
            || ||||| ||||| || || |||||||||||||| ||||||||||
Sbjct: 2060 ttagcacatgtcataacacttggcagatcatcatctgcagactctg 2015
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>gb|AY103840.1| Zea mays PCO125096 mRNA sequence
          Length = 1983

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 132/162 (81%)
 Strand = Plus / Minus

                                                                        
Query: 222  tatgaaagatcaaacgacccctggccttcgttgatagcataaagcagcttcttgtgcata 281
            |||||||||||||| || ||  |||||||   ||| |||||||||| ||||||| |||| 
Sbjct: 1842 tatgaaagatcaaatgatcctcggccttccaggatcgcataaagcaacttcttgcgcatg 1783

                                                                        
Query: 282  acttcctttgtcgagtatggcggaagtttaagatagttggcacaagtcatgacgctaggc 341
            | ||| ||||| ||||| || || || || ||||| ||||| || ||||| || ||||||
Sbjct: 1782 atttcttttgtggagtaggggggcagcttcagataattggcgcacgtcatcacactaggc 1723

                                                      
Query: 342  agatcatcatcagcagactctgctgctccagctgcatttgaa 383
            | |||||||||||| |||||| |||| |||| || |||||||
Sbjct: 1722 aaatcatcatcagcggactctactgccccagttgaatttgaa 1681
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>ref|NM_120021.2| Arabidopsis thaliana KAK (KAKTUS) AT4G38600 (KAK) transcript variant
            AT4G38600.2 mRNA, complete cds
          Length = 5954

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  ccttcgttgatagcataaagcagcttcttgtgcataacttcctttgtcgagtatggcgga 305
            ||||||||||| || || ||||| ||||||| ||| | ||||||||| || || || || 
Sbjct: 5539 ccttcgttgatggcgtagagcagtttcttgtacatgatttcctttgtagaataaggaggg 5480

                                                           
Query: 306  agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
            |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 5479 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 5433
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>ref|NM_179236.2| Arabidopsis thaliana KAK (KAKTUS) AT4G38600 (KAK) transcript variant
            AT4G38600.1 mRNA, complete cds
          Length = 6139

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  ccttcgttgatagcataaagcagcttcttgtgcataacttcctttgtcgagtatggcgga 305
            ||||||||||| || || ||||| ||||||| ||| | ||||||||| || || || || 
Sbjct: 5642 ccttcgttgatggcgtagagcagtttcttgtacatgatttcctttgtagaataaggaggg 5583

                                                           
Query: 306  agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
            |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 5582 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 5536
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>gb|AY265959.1| Arabidopsis thaliana HECT ubiquitin-protein ligase 3 mRNA, complete
            cds
          Length = 6138

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  ccttcgttgatagcataaagcagcttcttgtgcataacttcctttgtcgagtatggcgga 305
            ||||||||||| || || ||||| ||||||| ||| | ||||||||| || || || || 
Sbjct: 5642 ccttcgttgatggcgtagagcagtttcttgtacatgatttcctttgtagaataaggaggg 5583

                                                           
Query: 306  agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
            |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 5582 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 5536
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>tpe|BN000268.1|ATH000268 TPA: TPA_exp: Arabidopsis thaliana mRNA for KAKTUS protein (kak gene)
          Length = 6138

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 89/107 (83%)
 Strand = Plus / Minus

                                                                        
Query: 246  ccttcgttgatagcataaagcagcttcttgtgcataacttcctttgtcgagtatggcgga 305
            ||||||||||| || || ||||| ||||||| ||| | ||||||||| || || || || 
Sbjct: 5642 ccttcgttgatggcgtagagcagtttcttgtacatgatttcctttgtagaataaggaggg 5583

                                                           
Query: 306  agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
            |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 5582 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 5536
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
             complete sequence
          Length = 35954743

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   tttgtcgagtatggcggaagtttaagatagttggcacaagtcatgacgctaggcagatca 347
             ||||| |||||||| || | ||||||||| || ||||| ||||| || || |||||||||
Sbjct: 87377 tttgtggagtatggaggcaatttaagataattagcacatgtcataacacttggcagatca 87436

                             
Query: 348   tcatcagcagactctg 363
             ||||| ||||||||||
Sbjct: 87437 tcatctgcagactctg 87452
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>dbj|AP005873.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1370C05
          Length = 148271

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   tttgtcgagtatggcggaagtttaagatagttggcacaagtcatgacgctaggcagatca 347
             ||||| |||||||| || | ||||||||| || ||||| ||||| || || |||||||||
Sbjct: 81986 tttgtggagtatggaggcaatttaagataattagcacatgtcataacacttggcagatca 82045

                             
Query: 348   tcatcagcagactctg 363
             ||||| ||||||||||
Sbjct: 82046 tcatctgcagactctg 82061
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>dbj|AP004187.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1435_F07
          Length = 139041

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                         
Query: 288   tttgtcgagtatggcggaagtttaagatagttggcacaagtcatgacgctaggcagatca 347
             ||||| |||||||| || | ||||||||| || ||||| ||||| || || |||||||||
Sbjct: 36404 tttgtggagtatggaggcaatttaagataattagcacatgtcataacacttggcagatca 36463

                             
Query: 348   tcatcagcagactctg 363
             ||||| ||||||||||
Sbjct: 36464 tcatctgcagactctg 36479
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>gb|AC121235.20| Medicago truncatula clone mth2-21k24, complete sequence
          Length = 116205

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 230   atcaaacgacccctggccttcgttgatagcataaagcagcttcttgtgcataacttcct 288
             |||||| || ||||||||||| ||||| ||||| |  |||||||||||||||| |||||
Sbjct: 63623 atcaaaggatccctggccttcattgattgcatacattagcttcttgtgcataatttcct 63681
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>gb|U76747.1|TAU76747 Triticum aestivum Tap mRNA, partial cds
          Length = 621

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 60/71 (84%)
 Strand = Plus / Minus

                                                                       
Query: 264 agcagcttcttgtgcataacttcctttgtcgagtatggcggaagtttaagatagttggca 323
           |||||||||||| |||| ||||||||||| || ||||| || || || ||||| ||||| 
Sbjct: 242 agcagcttcttgcgcatgacttcctttgtggaatatgggggtagcttgagataattggcg 183

                      
Query: 324 caagtcatgac 334
           || ||||||||
Sbjct: 182 catgtcatgac 172
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>ref|XM_460177.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E21175g)
            partial mRNA
          Length = 4995

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 303  ggaagtttaagatagttggcacaagtcatgacgctaggcagatcatcatca 353
            |||||||||||||| || || |||||||| || ||||||| || |||||||
Sbjct: 4913 ggaagtttaagataattagcgcaagtcattacactaggcaaataatcatca 4863
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>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces
               hansenii
          Length = 2037969

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                                  
Query: 303     ggaagtttaagatagttggcacaagtcatgacgctaggcagatcatcatca 353
               |||||||||||||| || || |||||||| || ||||||| || |||||||
Sbjct: 1668312 ggaagtttaagataattagcgcaagtcattacactaggcaaataatcatca 1668362
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>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89
          Length = 199789

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                             
Query: 306    agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
              |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 150612 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 150658
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>gb|AC069558.5|AC069558 Genomic Sequence For Arabidopsis thaliana Clone T5G13 From Chromosome
             IV, complete sequence
          Length = 107740

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 306   agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
             |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 14915 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 14869
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>gb|AC069327.7|AC069327 Genomic Sequence For Arabidopsis thaliana Clone T26G08 From Chromosome
             IV, complete sequence
          Length = 94770

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                            
Query: 306   agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
             |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 92664 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 92618
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>emb|BX004819.11| Zebrafish DNA sequence from clone CH211-208B16 in linkage group 8,
             complete sequence
          Length = 234864

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 145   aatgaacaaactaactgaataaa 167
             |||||||||||||||||||||||
Sbjct: 43817 aatgaacaaactaactgaataaa 43795
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>emb|AL035540.1|ATF20M13 Arabidopsis thaliana DNA chromosome 4, BAC clone  F20M13 (ESSA project)
          Length = 91938

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 306   agtttaagatagttggcacaagtcatgacgctaggcagatcatcatc 352
             |||||||| ||||| || ||||||||||| || |||| |||||||||
Sbjct: 51553 agtttaaggtagtttgcgcaagtcatgacactgggcaaatcatcatc 51599
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>gb|AC095247.5| Rattus norvegicus 4 BAC CH230-10C6 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 238466

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 238    acccctggccttcgttgatagcata 262
              ||||||||||||| |||||||||||
Sbjct: 137088 acccctggccttctttgatagcata 137112
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>gb|AC087066.3| Rattus norvegicus strain Brown Norway clone RP31-194D8, complete sequence
          Length = 166751

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 238    acccctggccttcgttgatagcata 262
              ||||||||||||| |||||||||||
Sbjct: 132652 acccctggccttctttgatagcata 132676
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>gb|AC121216.4| Rattus norvegicus 4 CH230-220A21 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 224326

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 238   acccctggccttcgttgatagcata 262
             ||||||||||||| |||||||||||
Sbjct: 49597 acccctggccttctttgatagcata 49621
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>gb|AC159277.3| Mus musculus BAC clone RP23-356J2 from chromosome 17, complete sequence
          Length = 231245

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 72     ctggcaccacaagatccaggc 92
              |||||||||||||||||||||
Sbjct: 102304 ctggcaccacaagatccaggc 102284
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 93       tctaaacctttcacaaaagaa 113
                |||||||||||||||||||||
Sbjct: 19057598 tctaaacctttcacaaaagaa 19057618
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>gb|DP000027.1| Rattus norvegicus target 1 genomic scaffold
          Length = 1888123

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 238    acccctggccttcgttgatagcata 262
              ||||||||||||| |||||||||||
Sbjct: 960990 acccctggccttctttgatagcata 961014
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>dbj|AB008921.2| Mus musculus mGpi1 gene, complete cds
          Length = 8098

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 72   ctggcaccacaagatccaggc 92
            |||||||||||||||||||||
Sbjct: 4547 ctggcaccacaagatccaggc 4527
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>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0009J19
          Length = 156988

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 93     tctaaacctttcacaaaagaa 113
              |||||||||||||||||||||
Sbjct: 150268 tctaaacctttcacaaaagaa 150288
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>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1616_B03
          Length = 96081

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 93    tctaaacctttcacaaaagaa 113
             |||||||||||||||||||||
Sbjct: 55082 tctaaacctttcacaaaagaa 55102
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>gb|AC124963.32| Medicago truncatula clone mth2-24f5, complete sequence
          Length = 159515

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 312  agatagttggcacaagtcatgacgctaggcag 343
            |||||||| ||||||||||| || ||||||||
Sbjct: 6290 agatagtttgcacaagtcatcacactaggcag 6259
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>emb|AL035555.11|HS217P22 Human DNA sequence from clone RP1-217P22 on chromosome 6p21.1-21.31
              Contains part of the DNAH8 gene for dynein axonemal heavy
              polypeptide 8 and a novel pseudogene similar to part of
              zuotin related factor-1 (ZRF1), complete sequence
          Length = 130796

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 121    aaagcctatgttatacatga 140
              ||||||||||||||||||||
Sbjct: 114612 aaagcctatgttatacatga 114593
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>emb|AL023284.1|HS406A7 Human DNA sequence from clone RP3-406A7 on chromosome 6q23-24 Contains a
              pseudogene similar to Elongation Factor 1-Alpha
              (EF-1-ALPHA, Statin S1), a ribosomal protein, large, P1
              (RPLP1) pseudogene, a novel pseudogene, a NADH
              dehydrogenase (ubiquinone) Fe-S protein 5 (15kD)
              (NADH-coenzyme Q reductase) (NDUFS5) pseudogene, the 3' end
              of the MAP7 gene for microtubule-associated protein 7
              (EMAP115, E-MAP-115) and a CpG island, complete sequence
          Length = 167691

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 270    ttcttgtgcataacttcctt 289
              ||||||||||||||||||||
Sbjct: 153401 ttcttgtgcataacttcctt 153420
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>emb|AL031173.1|DMSEG0001 Drosophila melanogaster sequence EG0001 (inter cosmid region from
             division 1AB)
          Length = 16554

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atgacgacaatgaacaaact 156
             ||||||||||||||||||||
Sbjct: 16198 atgacgacaatgaacaaact 16217
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>gb|AC105774.8| Drosophila melanogaster X BAC RP98-8O5 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 170186

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 137   atgacgacaatgaacaaact 156
             ||||||||||||||||||||
Sbjct: 41890 atgacgacaatgaacaaact 41909
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>emb|BX571943.8| Zebrafish DNA sequence from clone DKEY-159C24 in linkage group 13,
             complete sequence
          Length = 193538

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 271   tcttgtgcataacttcctttgtcg 294
             ||||||||| ||||||||||||||
Sbjct: 96514 tcttgtgcagaacttcctttgtcg 96491
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>gb|AC009385.8| Drosophila melanogaster 3L BAC RP98-23M20 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 178628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tctgctgctccagctgcatt 379
             ||||||||||||||||||||
Sbjct: 51000 tctgctgctccagctgcatt 50981
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>gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, complete sequence
          Length = 164270

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 121   aaagcctatgttatacatga 140
             ||||||||||||||||||||
Sbjct: 91677 aaagcctatgttatacatga 91658
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>gb|AC116340.3| Homo sapiens chromosome 5 clone RP11-118I21, complete sequence
          Length = 160144

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 194   aacatctgtatgttagtttt 213
             ||||||||||||||||||||
Sbjct: 53387 aacatctgtatgttagtttt 53406
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>gb|AC097721.3| Homo sapiens BAC clone RP11-36O6 from 2, complete sequence
          Length = 144493

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 4     agccactatagagatcagttggag 27
             |||||||||||||| |||||||||
Sbjct: 88559 agccactatagagaacagttggag 88582
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>gb|AC069240.23| Homo sapiens 12 BAC RP11-385N17 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 210010

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 150    acaaactaactgaataaaaactgg 173
              |||||||||||||||||| |||||
Sbjct: 118726 acaaactaactgaataaagactgg 118749
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>gb|AE003520.4| Drosophila melanogaster chromosome 3L, section 65 of 83 of the complete
              sequence
          Length = 275124

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 360    tctgctgctccagctgcatt 379
              ||||||||||||||||||||
Sbjct: 230225 tctgctgctccagctgcatt 230206
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>gb|AE003417.4| Drosophila melanogaster chromosome X, section 1 of 74 of the complete
              sequence
          Length = 387740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    atgacgacaatgaacaaact 156
              ||||||||||||||||||||
Sbjct: 299373 atgacgacaatgaacaaact 299392


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,529,928
Number of Sequences: 3902068
Number of extensions: 3529928
Number of successful extensions: 66991
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 66862
Number of HSP's gapped (non-prelim): 128
length of query: 383
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 361
effective length of database: 17,147,199,772
effective search space: 6190139117692
effective search space used: 6190139117692
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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