>gb|AC134592.5| Mus musculus BAC clone RP23-381O3 from chromosome 9, complete sequence
          Length = 184917

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 159    ttcattgtaggtttgtttggttcttg 184
              |||||||||||||| |||||||||||
Sbjct: 167233 ttcattgtaggtttttttggttcttg 167258

>gb|AC117616.8| Mus musculus chromosome 9, clone RP23-111P13, complete sequence
          Length = 242288

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 159    ttcattgtaggtttgtttggttcttg 184
              |||||||||||||| |||||||||||
Sbjct: 203516 ttcattgtaggtttttttggttcttg 203541

>dbj|AP000487.6| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-66H16, complete
             sequence
          Length = 177076

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 26    gttggtctcttaactcctagct 47
             ||||||||||||||||||||||
Sbjct: 47067 gttggtctcttaactcctagct 47046

>dbj|AP002336.5| Homo sapiens genomic DNA, chromosome 11 clone:CTA-797E19, complete
              sequence
          Length = 112479

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 26     gttggtctcttaactcctagct 47
              ||||||||||||||||||||||
Sbjct: 107250 gttggtctcttaactcctagct 107229

>gb|AC141562.4| Mus musculus BAC clone RP23-381N2 from 9, complete sequence
          Length = 190178

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 159    ttcattgtaggtttgtttggttcttg 184
              |||||||||||||| |||||||||||
Sbjct: 160272 ttcattgtaggtttttttggttcttg 160247

>gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 353   gaactcatatacataaacatg 373
             |||||||||||||||||||||
Sbjct: 39452 gaactcatatacataaacatg 39472

>gb|AC145944.3| Gallus gallus chromosome UNK clone CH261-22N7, complete sequence
          Length = 215147

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 361   atacataaacatggtcacatt 381
             |||||||||||||||||||||
Sbjct: 66062 atacataaacatggtcacatt 66082

>gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, complete sequence
          Length = 187065

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 353    gaactcatatacataaacatg 373
              |||||||||||||||||||||
Sbjct: 183585 gaactcatatacataaacatg 183605

>gb|AY122171.1| Drosophila melanogaster LD29171 full insert cDNA
          Length = 5826

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 196  tcgatattgttggccttcatttcgt 220
            |||||||| ||||||||||||||||
Sbjct: 3027 tcgatattcttggccttcatttcgt 3003

>ref|NM_165059.1| Drosophila melanogaster CG7578-RB, transcript variant B (CG7578),
            mRNA
          Length = 5672

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 196  tcgatattgttggccttcatttcgt 220
            |||||||| ||||||||||||||||
Sbjct: 3027 tcgatattcttggccttcatttcgt 3003

>ref|NM_135831.2| Drosophila melanogaster CG7578-RA, transcript variant A (CG7578),
            mRNA
          Length = 5799

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 196  tcgatattgttggccttcatttcgt 220
            |||||||| ||||||||||||||||
Sbjct: 3030 tcgatattcttggccttcatttcgt 3006

>gb|AC092236.1|AC092236 Drosophila melanogaster, chromosome 2L, region 34D-34D, BAC clone
              BACR30I21, complete sequence
          Length = 161682

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 196    tcgatattgttggccttcatttcgt 220
              |||||||| ||||||||||||||||
Sbjct: 126834 tcgatattcttggccttcatttcgt 126810

>gb|AC083900.6| Homo sapiens BAC clone RP11-372C13 from 2, complete sequence
          Length = 155161

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 269    gaatacattagttctcccacacaga 293
              ||||||| |||||||||||||||||
Sbjct: 152281 gaatacagtagttctcccacacaga 152305

>gb|AE003641.3| Drosophila melanogaster chromosome 2L, section 50 of 83 of the complete
              sequence
          Length = 304772

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 196    tcgatattgttggccttcatttcgt 220
              |||||||| ||||||||||||||||
Sbjct: 143349 tcgatattcttggccttcatttcgt 143325

>gb|AC134610.5| Mus musculus BAC clone RP23-79B24 from chromosome 13, complete sequence
          Length = 235557

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 51     tcttgtatctgatgtcaaca 70
              ||||||||||||||||||||
Sbjct: 197409 tcttgtatctgatgtcaaca 197390

>gb|AC107750.9| Mus musculus chromosome 13, clone RP23-249C3, complete sequence
          Length = 220740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 51     tcttgtatctgatgtcaaca 70
              ||||||||||||||||||||
Sbjct: 109695 tcttgtatctgatgtcaaca 109714

>emb|AL591662.6| Human DNA sequence from clone RP11-28P17 on chromosome 9 Contains part of
              the TMC1 gene for transmembrane cochlear-expressed 1, a
              ribosomal protein S20 (RPS20) pseudogene and a ribosomal
              protein S27a (RPS27A) pseudogene, complete sequence
          Length = 170815

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 356    ctcatatacataaacatggtcaca 379
              ||||||||||||||||||| ||||
Sbjct: 130839 ctcatatacataaacatggccaca 130816

>gb|AC087878.7| Homo sapiens chromosome 15, clone RP11-62C7, complete sequence
          Length = 166485

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     tcaacagggaagacatgaag 84
              ||||||||||||||||||||
Sbjct: 113342 tcaacagggaagacatgaag 113323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,501,367
Number of Sequences: 3902068
Number of extensions: 3501367
Number of successful extensions: 72959
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72921
Number of HSP's gapped (non-prelim): 38
length of query: 410
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 388
effective length of database: 17,147,199,772
effective search space: 6653113511536
effective search space used: 6653113511536
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)